Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 1.7e-137 492.7 252 100.0
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 6.2e-135 484.2 252 95.6
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.4e-123 446.4 260 88.5
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.7e-121 439.5 254 89.0
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 3.0e-121 438.7 255 87.1
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 4.6e-114 414.8 243 86.0
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 6.2e-111 404.4 213 95.3
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 7.3e-104 380.9 243 79.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 3.2e-99 365.5 236 76.3
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 5.4e-99 364.8 239 77.0
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 7.1e-99 364.4 242 75.6
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 4.6e-98 361.7 239 77.0
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 6.0e-98 361.3 237 74.7
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 6.0e-98 361.3 234 73.9
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 3.0e-97 359.0 235 75.3
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 3.0e-97 359.0 235 75.3
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 3.9e-97 358.6 199 87.4
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 5.1e-97 358.2 199 87.4
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.1e-96 357.1 237 75.1
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 7.4e-96 354.4 247 73.7
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 2.1e-95 352.8 216 79.6
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 2.8e-95 352.4 202 84.2
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 8.1e-95 350.9 200 83.5
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 8.1e-95 350.9 236 75.4
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 8.1e-95 350.9 248 73.4
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.1e-94 350.5 199 83.9
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 2.4e-94 349.4 245 71.8
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 4.0e-94 348.6 230 74.8
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 6.9e-94 347.8 198 83.8
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.2e-93 347.1 202 82.2
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.2e-93 347.1 202 82.2
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 1.5e-93 346.7 243 71.2
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 2.6e-93 345.9 202 81.2
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 2.6e-93 345.9 201 79.6
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 4.5e-93 345.1 201 81.6
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 4.5e-93 345.1 231 71.9
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.5e-93 345.1 239 74.9
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 5.8e-93 344.7 201 81.6
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 7.6e-93 344.4 202 78.2
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 7.6e-93 344.4 199 82.4
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 7.6e-93 344.4 242 70.2
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 2.2e-92 342.8 229 77.3
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.2e-92 342.8 258 70.5
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 2.9e-92 342.4 202 77.7
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 1.4e-91 340.1 234 71.8
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 1.9e-91 339.7 197 81.7
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.9e-91 339.7 198 81.3
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 2.5e-91 339.3 199 80.9
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 3.2e-91 339.0 199 82.4
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 3.2e-91 339.0 208 79.8
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 5.5e-91 338.2 256 67.2
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 9.3e-91 337.4 211 80.6
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 1.2e-90 337.0 198 80.3
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 6.0e-90 334.7 197 80.7
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 1.8e-89 333.2 196 79.6
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.9e-89 332.0 199 77.4
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 5.1e-89 331.6 198 80.8
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 8.7e-89 330.9 199 76.9
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 2.5e-88 329.3 258 67.1
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 9.6e-88 327.4 198 79.3
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.3e-87 327.0 207 79.7
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 6.2e-87 324.7 228 71.1
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.1e-86 323.9 199 78.4
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 2.4e-86 322.8 239 68.2
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 5.3e-86 321.6 213 71.8
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 6.9e-86 321.2 241 67.6
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 9.0e-86 320.9 228 70.2
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 2.0e-85 319.7 222 70.3
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 3.4e-85 318.9 196 78.1
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 5.8e-85 318.2 238 67.6
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 1.3e-84 317.0 200 77.5
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.7e-84 316.6 199 77.4
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 6.5e-84 314.7 211 72.5
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 6.5e-84 314.7 211 72.5
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.9e-83 313.2 187 79.1
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 2.5e-83 312.8 226 65.9
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 7.1e-83 311.2 198 72.2
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 7.1e-83 311.2 211 71.6
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 9.3e-83 310.8 211 71.6
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.2e-82 310.5 217 69.1
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 1.2e-82 310.5 211 71.6
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 1.2e-82 310.5 211 72.5
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 2.7e-82 309.3 215 70.7
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 1.9e-80 303.1 204 74.0
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 3.3e-80 302.4 171 84.2
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 6.3e-79 298.1 182 80.2
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.2e-77 293.9 195 70.8
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.3e-76 290.4 193 72.0
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 8.5e-76 287.7 191 70.7
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 1.6e-74 283.5 194 67.0
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.9e-65 252.3 147 81.6
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 5.1e-65 251.9 191 61.3
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 2.9e-60 236.1 129 88.4
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 5.0e-60 235.3 239 54.0
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.4e-59 233.8 153 77.1
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.4e-57 227.3 239 53.6
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 7.7e-53 211.5 133 78.2
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 9.4e-51 204.5 156 64.7
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 8.8e-49 198.0 245 47.8
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 8.3e-47 191.4 168 54.8
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 1.5e-43 180.6 143 57.3
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 3.6e-42 176.0 131 64.9
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 1.3e-39 167.5 183 43.7
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 1.1e-38 164.5 99 80.8
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 3.1e-38 162.9 97 75.3
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.6e-37 160.6 107 81.3
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.7e-36 157.1 112 67.9
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.0e-33 146.4 122 60.7
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.4e-32 142.5 98 68.4
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 5.7e-32 142.1 97 73.2
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.1e-30 137.9 144 47.2
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 2.0e-29 133.7 132 55.3
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 2.7e-29 133.3 191 38.7
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 6.6e-28 128.6 187 39.0
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.6e-21 107.5 108 57.4
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 6.0e-21 105.5 71 66.2
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 1.2e-18 97.8 53 81.1
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.7e-15 87.4 51 80.4
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.3e-12 77.8 64 57.8
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.3e-12 77.8 60 58.3
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 6.6e-12 75.5 55 56.4
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 8.6e-12 75.1 51 62.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.1e-09 66.6 68 54.4
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 4.0e-09 66.2 43 76.7
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 3.7e-07 59.7 40 77.5


User provided reference genes

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