Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 5.1e-51 204.5 136 100.0
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 1.5e-47 193.0 136 92.6
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 4.2e-45 184.9 136 94.1
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 4.5e-39 164.9 133 78.9
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 2.9e-38 162.2 136 74.3
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.4e-37 159.1 133 76.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 1.9e-34 149.4 136 73.5
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 9.0e-32 140.6 135 68.1
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 4.2e-29 131.7 130 63.8
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 2.7e-28 129.0 135 68.1
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 3.5e-28 128.6 133 66.2
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 4.3e-26 121.7 137 65.0
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 4.3e-26 121.7 134 64.9
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 7.4e-26 120.9 129 65.1
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 7.4e-26 120.9 139 63.3
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 1.3e-25 120.2 133 61.7
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 3.1e-24 115.5 134 58.2
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 3.1e-24 115.5 131 58.0
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 9.0e-24 114.0 137 56.9
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 2.0e-23 112.8 129 65.9
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 5.9e-23 111.3 131 65.6
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 7.6e-23 110.9 129 62.8
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 7.6e-23 110.9 135 60.0
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 7.6e-23 110.9 135 60.0
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 3.8e-22 108.6 131 61.8
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 3.8e-22 108.6 133 61.7
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 5.0e-22 108.2 130 61.5
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 6.5e-22 107.8 130 56.2
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 6.5e-22 107.8 128 62.5
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 8.5e-22 107.5 130 57.7
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 8.5e-22 107.5 131 55.0
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 1.1e-21 107.1 139 63.3
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 1.9e-21 106.3 131 63.4
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 2.5e-21 105.9 133 61.7
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 3.2e-21 105.5 133 58.6
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 4.2e-21 105.1 133 63.2
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 4.2e-21 105.1 131 59.5
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 4.2e-21 105.1 135 60.7
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 4.2e-21 105.1 139 51.1
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 5.5e-21 104.8 132 56.1
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 7.2e-21 104.4 137 56.9
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 7.2e-21 104.4 137 56.9
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 7.2e-21 104.4 132 55.3
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 9.4e-21 104.0 131 60.3
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 9.4e-21 104.0 131 60.3
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 1.6e-20 103.2 133 57.9
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 2.1e-20 102.8 140 53.6
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 2.1e-20 102.8 133 60.9
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 4.6e-20 101.7 138 50.7
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 6.1e-20 101.3 140 53.6
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 6.1e-20 101.3 131 59.5
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 2.3e-19 99.4 135 59.3
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 3.9e-19 98.6 130 59.2
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 6.7e-19 97.8 134 59.7
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 6.7e-19 97.8 127 63.8
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 6.7e-19 97.8 130 52.3
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 1.1e-18 97.1 127 59.1
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 1.9e-18 96.3 133 61.7
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 1.9e-18 96.3 133 61.7
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 1.9e-18 96.3 133 61.7
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 1.9e-18 96.3 133 61.7
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 2.5e-18 95.9 131 60.3
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 3.3e-18 95.5 136 55.9
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 3.3e-18 95.5 132 57.6
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 7.4e-18 94.4 137 59.9
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 3.7e-17 92.0 129 61.2
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 1.4e-16 90.1 136 55.1
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 2.4e-16 89.4 134 55.2
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 4.1e-16 88.6 123 51.2
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 5.3e-16 88.2 129 55.0
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 5.3e-16 88.2 131 58.8
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 2.0e-15 86.3 162 49.4
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 4.5e-15 85.1 134 55.2
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 4.5e-15 85.1 130 53.1
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 2.2e-14 82.8 136 52.9
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 2.9e-14 82.4 130 56.9
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 3.8e-14 82.0 128 53.1
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 1.1e-13 80.5 130 51.5
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 5.5e-13 78.2 134 52.2
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 9.4e-13 77.4 99 64.6
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.2e-12 77.0 131 54.2
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 4.7e-12 75.1 91 63.7
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 4.7e-12 75.1 132 54.5
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 1.8e-11 73.2 131 54.2
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 2.3e-11 72.8 89 55.1
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 6.7e-11 71.2 117 50.4
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.3e-10 68.9 165 44.8
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 7.4e-10 67.8 88 68.2
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 2.2e-09 66.2 100 60.0
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 8.2e-09 64.3 114 51.8
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.1e-08 63.9 98 63.3
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 2.0e-07 59.7 93 48.4
MD11G1234100 Malus domestica HOM05D007581 ORTHO05D009250 1.7e-06 56.6 55 45.5
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 2.9e-06 55.8 90 56.7
PGR102G1605 Punica granatum HOM05D007581 ORTHO05D009250 2.9e-06 55.8 105 62.9
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 8.5e-06 54.3 136 47.8
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 8.5e-06 54.3 96 60.4


User provided reference genes

Program Settings