Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g004140 Solanum pennellii HOM05D004884 ORTHO05D005873 4.0e-54 214.5 110 100.0
Solyc11g008330.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 4.7e-47 191.0 148 73.0
Gorai.001G184900 Gossypium raimondii HOM05D004884 ORTHO05D005873 2.0e-42 175.6 110 76.4
Prupe.3G084300 Prunus persica HOM05D004884 ORTHO05D005873 2.0e-42 175.6 148 64.9
PSO455G0277 Papaver somniferum HOM05D004884 ORTHO05D005873 3.5e-42 174.9 148 63.5
MD17G1208900 Malus domestica HOM05D004884 ORTHO05D005873 4.6e-42 174.5 148 64.2
Cc04_g04240 Coffea canephora HOM05D004884 ORTHO05D005873 6.0e-42 174.1 148 63.5
ClCG05G016940 Citrullus lanatus HOM05D004884 ORTHO05D005873 7.8e-42 173.7 148 63.5
MELO3C003694.2 Cucumis melo HOM05D004884 ORTHO05D005873 7.8e-42 173.7 148 63.5
VMungo0331G0880 Vigna mungo HOM05D004884 ORTHO05D005873 1.0e-41 173.3 148 63.5
Actinidia18100 Actinidia chinensis HOM05D004884 ORTHO05D005873 1.3e-41 172.9 148 62.8
Dinv30589 Davidia involucrata HOM05D004884 ORTHO05D005873 1.3e-41 172.9 148 62.2
HanXRQChr02g0046821 Helianthus annuus HOM05D004884 ORTHO05D005873 1.3e-41 172.9 148 62.8
Lsat_1_v5_gn_1_2440 Lactuca sativa HOM05D004884 ORTHO05D005873 1.3e-41 172.9 148 62.8
PSO170G2441 Papaver somniferum HOM05D004884 ORTHO05D005873 1.3e-41 172.9 148 62.8
Atru.chr1.2995 Acer truncatum HOM05D004884 ORTHO05D005873 1.7e-41 172.6 148 62.8
Ciclev10026708m.g Citrus clementina HOM05D004884 ORTHO05D005873 1.7e-41 172.6 148 62.8
SalBow3G1656 Salvia bowleyana HOM05D004884 ORTHO05D005873 1.7e-41 172.6 148 63.5
CsaV3_3G046450 Cucumis sativus L. HOM05D004884 ORTHO05D005873 2.3e-41 172.2 148 62.8
ECA240G3509 Erigeron canadensis HOM05D004884 ORTHO05D005873 2.3e-41 172.2 148 62.8
Phvul.010G154800 Phaseolus vulgaris HOM05D004884 ORTHO05D005873 2.3e-41 172.2 148 62.8
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 3.0e-41 171.8 148 62.8
Glyma.07G031300 Glycine max HOM05D004884 ORTHO05D005873 3.0e-41 171.8 148 62.8
Glyma.08G211500 Glycine max HOM05D004884 ORTHO05D005873 3.0e-41 171.8 148 62.8
Gohir.D07G161600 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.0e-41 171.8 110 75.5
Nitab4.5_0006187g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.9e-41 171.4 104 81.7
vmacro20098 Vaccinium macrocarpon HOM05D004884 ORTHO05D005873 3.9e-41 171.4 148 62.8
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla HOM05D004884 ORTHO05D005873 5.0e-41 171.0 148 62.2
Rhsim10G0061400 Rhododendron simsii HOM05D004884 ORTHO05D005873 5.0e-41 171.0 148 62.2
MSTRG.9432 Avicennia marina HOM05D004884 ORTHO05D005873 6.6e-41 170.6 148 61.5
Haze_21525 Corylus avellana HOM05D004884 ORTHO05D005873 6.6e-41 170.6 138 65.2
Migut.D01065 Erythranthe guttata HOM05D004884 ORTHO05D005873 6.6e-41 170.6 148 62.2
MBI04_g07835_MAGBIO Magnolia biondii HOM05D004884 ORTHO05D005873 8.6e-41 170.2 148 61.5
SGA_v2.0_scaffold117G32369 Striga asiatica HOM05D004884 ORTHO05D005873 8.6e-41 170.2 148 62.8
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 1.1e-40 169.9 146 61.6
Lalb_Chr04g0262431 Lupinus albus HOM05D004884 ORTHO05D005873 1.1e-40 169.9 148 62.2
RcHm_v2.0_Chr2g0135941 Rosa chinensis HOM05D004884 ORTHO05D005873 1.1e-40 169.9 148 61.5
Aqoxy1G02408 Aquilegia oxysepala HOM05D004884 ORTHO05D005873 1.5e-40 169.5 148 60.8
Eucgr.F02527 Eucalyptus grandis HOM05D004884 ORTHO05D005873 1.5e-40 169.5 148 62.8
FvH4_6g29940 Fragaria vesca HOM05D004884 ORTHO05D005873 1.9e-40 169.1 148 62.8
FAN14G1538 Fragaria x ananassa HOM05D004884 ORTHO05D005873 1.9e-40 169.1 148 62.8
Oeu045160.1 Olea europaea HOM05D004884 ORTHO05D005873 1.9e-40 169.1 148 61.5
PGR031G3479 Punica granatum HOM05D004884 ORTHO05D005873 1.9e-40 169.1 148 62.8
Sed0027624 Sechium edule HOM05D004884 ORTHO05D005873 2.5e-40 168.7 148 62.2
THA.LOC104808231 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 2.5e-40 168.7 148 60.8
Oeu052257.1 Olea europaea HOM05D004884 ORTHO05D005873 3.3e-40 168.3 148 61.5
Lj3g0000080 Lotus japonicus HOM05D004884 ORTHO05D005873 4.3e-40 167.9 148 60.8
Lalb_Chr22g0350881 Lupinus albus HOM05D004884 ORTHO05D005873 4.3e-40 167.9 148 62.2
Psat5g301920 Pisum sativum HOM05D004884 ORTHO05D005873 4.3e-40 167.9 148 60.8
CSS0003587 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 5.6e-40 167.5 148 60.8
FAN09G2574 Fragaria x ananassa HOM05D004884 ORTHO05D005873 5.6e-40 167.5 148 62.2
CAN.G407.94 Capsicum annuum HOM05D004884 ORTHO05D005873 7.3e-40 167.2 148 61.5
Cfa013154 Carpinus fangiana HOM05D004884 ORTHO05D005873 7.3e-40 167.2 148 60.1
COL.COLO4_12946 Corchorus olitorius HOM05D004884 ORTHO05D005873 7.3e-40 167.2 148 60.1
Glyma.15G008700 Glycine max HOM05D004884 ORTHO05D005873 7.3e-40 167.2 104 76.9
THA.LOC104812503 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 7.3e-40 167.2 148 58.8
Manes.04G114100 Manihot esculenta HOM05D004884 ORTHO05D005873 9.5e-40 166.8 148 60.1
GSVIVG01017313001 Vitis vinifera HOM05D004884 ORTHO05D005873 9.5e-40 166.8 148 61.5
AUR62012381 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.2e-39 166.4 148 58.1
FAN02G1988 Fragaria x ananassa HOM05D004884 ORTHO05D005873 1.2e-39 166.4 148 62.2
Gohir.D06G099800 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.2e-39 166.4 145 60.7
QL05p029075 Quercus lobata HOM05D004884 ORTHO05D005873 1.2e-39 166.4 146 61.6
TAR636G0424 Trochodendron aralioides HOM05D004884 ORTHO05D005873 1.2e-39 166.4 148 58.8
CiPaw.08G011500 Carya illinoinensis HOM05D004884 ORTHO05D005873 1.6e-39 166.0 146 60.3
Medtr2g103690 Medicago truncatula HOM05D004884 ORTHO05D005873 1.6e-39 166.0 148 60.8
Nn2g12037 Nelumbo nucifera HOM05D004884 ORTHO05D005873 2.1e-39 165.6 148 60.8
Sopen03g035510 Solanum pennellii HOM05D004884 ORTHO05D005873 2.1e-39 165.6 148 60.1
unitig_747.g21296 Utricularia gibba HOM05D004884 ORTHO05D005873 2.1e-39 165.6 148 58.8
Gohir.D10G076700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.8e-39 165.2 148 59.5
Gorai.010G114700 Gossypium raimondii HOM05D004884 ORTHO05D005873 3.6e-39 164.9 145 60.0
QL02p021869 Quercus lobata HOM05D004884 ORTHO05D005873 3.6e-39 164.9 146 60.3
PGSC0003DMG400000635 Solanum tuberosum HOM05D004884 ORTHO05D005873 3.6e-39 164.9 148 60.1
Solyc03g116600.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 4.7e-39 164.5 148 59.5
Solyc06g068080.4 Solanum lycopersicum HOM05D004884 ORTHO05D005873 4.7e-39 164.5 148 60.8
Sopen06g025360 Solanum pennellii HOM05D004884 ORTHO05D005873 4.7e-39 164.5 148 60.8
PGSC0003DMG400028511 Solanum tuberosum HOM05D004884 ORTHO05D005873 4.7e-39 164.5 148 60.8
Thecc.06G021400 Theobroma cacao HOM05D004884 ORTHO05D005873 4.7e-39 164.5 148 58.8
AL1G27470 Arabidopsis lyrata HOM05D004884 ORTHO05D005873 8.0e-39 163.7 148 57.4
AT1G15370 Arabidopsis thaliana HOM05D004884 ORTHO05D005873 8.0e-39 163.7 148 57.4
CSS0011163 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 8.0e-39 163.7 104 73.1
Aa31LG4G430 Aethionema arabicum HOM05D004884 ORTHO05D005873 1.4e-38 162.9 104 72.1
CAN.G321.60 Capsicum annuum HOM05D004884 ORTHO05D005873 1.4e-38 162.9 104 77.9
Potri.001G193100 Populus trichocarpa HOM05D004884 ORTHO05D005873 2.3e-38 162.2 148 57.4
Sabra01G0135700 Salix brachista HOM05D004884 ORTHO05D005873 2.3e-38 162.2 148 57.4
Carub.0001s1514 Capsella rubella HOM05D004884 ORTHO05D005873 3.1e-38 161.8 146 57.5
Duzib235G0621 Durio zibethinus HOM05D004884 ORTHO05D005873 4.0e-38 161.4 148 58.8
CARHR015900 Cardamine hirsuta HOM05D004884 ORTHO05D005873 5.2e-38 161.0 148 56.1
Sp1g13700 Schrenkiella parvula HOM05D004884 ORTHO05D005873 6.8e-38 160.6 148 56.8
BcaB03g14545 Brassica carinata HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
BcaC05g25475 Brassica carinata HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
BcaC05g25490 Brassica carinata HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
A06p11400 Brassica napus HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
A09p61460 Brassica napus HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
C05p13510 Brassica napus HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
C08p45030 Brassica napus HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
BolC5t30088H Brassica oleracea HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
BraA06t24317Z Brassica rapa HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
BraA09t41517Z Brassica rapa HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
Thhalv10009024m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 8.9e-38 160.2 148 56.8
Gohir.A10G074700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.2e-37 159.8 148 58.1
BcaC07g41506 Brassica carinata HOM05D004884 ORTHO05D005873 3.4e-37 158.3 148 56.1
BolC8t52049H Brassica oleracea HOM05D004884 ORTHO05D005873 3.4e-37 158.3 148 56.1
FAN05G0038 Fragaria x ananassa HOM05D004884 ORTHO05D005873 3.4e-37 158.3 168 55.4
Thhalv10019295m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 4.4e-37 157.9 146 56.2
Peaxi162Scf00207g00728 Petunia axillaris HOM05D004884 ORTHO05D005873 7.5e-37 157.1 148 58.8
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 9.8e-37 156.8 102 70.6
Sed0022166 Sechium edule HOM05D004884 ORTHO05D005873 9.8e-37 156.8 140 60.7
Zm00001eb064920 Zea mays HOM05D004884 ORTHO05D005873 9.8e-37 156.8 146 56.8
Potri.006G253700 Populus trichocarpa HOM05D004884 ORTHO05D005873 1.3e-36 156.4 142 57.7
TWI75G0638 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 2.2e-36 155.6 148 54.7
TWI34G0752 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 2.9e-36 155.2 148 56.1
EL10Ac2g04219 Beta vulgaris HOM05D004884 ORTHO05D005873 3.7e-36 154.8 158 54.4
AUR62031521 Chenopodium quinoa HOM05D004884 ORTHO05D005873 6.4e-36 154.1 92 75.0
Peaxi162Scf00145g01210 Petunia axillaris HOM05D004884 ORTHO05D005873 1.2e-34 149.8 130 65.4
Nitab4.5_0013106g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.5e-34 148.3 139 59.0
EL10Ac9g22900 Beta vulgaris HOM05D004884 ORTHO05D005873 1.9e-32 142.5 148 52.7
AUR62012868 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.9e-32 142.5 146 53.4
Peaxi162Scf00332g00767 Petunia axillaris HOM05D004884 ORTHO05D005873 1.1e-30 136.7 104 66.3
Gohir.D13G076450 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.1e-30 135.2 84 73.8
SMO143G0054 Selaginella moellendorffii HOM05D004884 ORTHO05D005873 5.2e-30 134.4 146 50.0
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea HOM05D004884 ORTHO05D005873 5.8e-29 131.0 131 56.5
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea HOM05D004884 ORTHO05D005873 5.8e-29 131.0 131 56.5
Actinidia36285 Actinidia chinensis HOM05D004884 ORTHO05D005873 2.2e-28 129.0 124 57.3
Sc23g0006790 Simmondsia chinensis HOM05D004884 ORTHO05D005873 2.2e-28 129.0 124 57.3
Dinv38109 Davidia involucrata HOM05D000250 ORTHO05D002477 2.9e-28 128.6 124 58.1
Gorai.013G087100 Gossypium raimondii HOM05D004884 ORTHO05D005873 3.7e-28 128.3 89 68.5
Gorai.011G082800 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.1e-27 126.7 124 56.5
Mapoly0005s0226 Marchantia polymorpha HOM05D004884 ORTHO05D005873 1.1e-27 126.7 100 58.0
Sabra06G0198100 Salix brachista HOM05D004884 ORTHO05D005873 1.4e-27 126.3 126 55.6
SalBow6G6988 Salvia bowleyana HOM05D004884 ORTHO05D005873 2.4e-27 125.6 122 59.0
Nitab4.5_0001764g0110 Nicotiana tabacum HOM05D004884 ORTHO05D005873 5.4e-27 124.4 123 56.9
Pp3c18_11860 Physcomitrium patens HOM05D004884 ORTHO05D005873 1.2e-26 123.2 146 45.2
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis HOM05D004884 ORTHO05D005873 2.1e-26 122.5 89 62.9
Gohir.A13G076901 Gossypium hirsutum HOM05D004884 ORTHO05D005873 6.8e-22 107.5 90 62.2
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 2.0e-21 105.9 118 50.8
QL05p029040 Quercus lobata HOM05D004884 ORTHO05D005873 4.9e-20 101.3 59 78.0
Gohir.A06G098210 Gossypium hirsutum HOM05D004884 ORTHO05D005873 6.4e-20 100.9 58 77.6
Nitab4.5_0005235g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.4e-19 99.8 102 51.0
CBR_g8585 Chara braunii HOM05D004884 ORTHO05D005873 6.0e-18 94.4 88 50.0
Nitab4.5_0001450g0150 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.0e-17 92.0 78 62.8
BcaC07g41508 Brassica carinata HOM05D004884 ORTHO05D005873 9.6e-16 87.0 114 43.9
Gohir.D01G156500 Gossypium hirsutum HOM05D004884 ORTHO05D005873 8.1e-15 84.0 50 74.0
Cre12.g561200 Chlamydomonas reinhardtii HOM05D004884 ORTHO05D005873 2.4e-14 82.4 76 50.0
MCO11G456 Micromonas commoda HOM05D004884 ORTHO05D005873 1.7e-09 66.2 83 42.2
PRCOL_00001860 Prasinoderma coloniale HOM05D004884 ORTHO05D005873 2.5e-08 62.4 108 33.3
Oeu024660.1 Olea europaea HOM05D004884 ORTHO05D005873 2.4e-06 55.8 81 48.1


User provided reference genes

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