Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g003730 Solanum pennellii HOM05D021137 ORTHO05D004438 6.4e-51 203.8 100 100.0
Solyc11g007870.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 4.6e-49 197.6 100 97.0
Solyc11g007880.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 1.6e-38 162.5 100 82.0
PGSC0003DMG400027332 Solanum tuberosum HOM05D021137 ORTHO05D004438 2.1e-38 162.2 100 81.0
Sopen11g003740 Solanum pennellii HOM05D021137 ORTHO05D004438 1.1e-37 159.8 100 81.0
CAN.G135.30 Capsicum annuum HOM05D021137 ORTHO05D004438 2.0e-20 102.4 101 57.4
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 4.6e-09 64.7 92 45.7
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 1.0e-08 63.5 93 44.1
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 2.3e-08 62.4 93 43.0
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 3.0e-08 62.0 110 37.3
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 1.5e-07 59.7 90 42.2
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 3.3e-07 58.5 112 37.5
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 3.3e-07 58.5 112 37.5
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 5.7e-07 57.8 69 47.8
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 9.6e-07 57.0 84 44.0
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 2.1e-06 55.8 76 39.5
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 2.1e-06 55.8 116 35.3
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 2.8e-06 55.5 95 38.9
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 3.7e-06 55.1 103 32.0
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 6.2e-06 54.3 71 43.7
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.2e-06 54.3 77 39.0
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.2e-06 54.3 77 39.0
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.2e-06 54.3 62 41.9
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 6.2e-06 54.3 66 50.0
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 8.2e-06 53.9 57 50.9
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 8.2e-06 53.9 78 41.0


User provided reference genes

Program Settings