Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 1.5e-50 202.6 105 100.0
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 4.1e-48 194.5 105 95.2
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 3.2e-45 184.9 107 92.5
CAN.G135.30 Capsicum annuum HOM05D021137 ORTHO05D004438 5.2e-19 97.8 105 52.4
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 2.8e-17 92.0 102 56.9
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 1.3e-14 83.2 109 49.5
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 2.5e-13 79.0 112 47.3
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 6.1e-12 74.3 107 47.7
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 1.0e-11 73.6 96 50.0
Solyc11g007880.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 1.4e-11 73.2 97 46.4
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 4.0e-11 71.6 100 49.0
Sopen11g003740 Solanum pennellii HOM05D021137 ORTHO05D004438 4.0e-11 71.6 97 46.4
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 8.8e-11 70.5 112 43.8
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 8.8e-11 70.5 107 43.9
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 2.0e-10 69.3 112 42.9
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 2.6e-10 68.9 102 46.1
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 2.6e-10 68.9 102 46.1
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 3.4e-10 68.6 120 42.5
Sopen05g033870 Solanum pennellii HOM05D005304 ORTHO05D004438 3.4e-10 68.6 103 45.6
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 7.5e-10 67.4 114 41.2
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 1.3e-09 66.6 106 42.5
PGSC0003DMG400027332 Solanum tuberosum HOM05D021137 ORTHO05D004438 1.3e-09 66.6 97 44.3
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 4.9e-09 64.7 114 43.9
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 4.9e-09 64.7 101 41.6
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 6.3e-09 64.3 106 44.3
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 8.3e-09 63.9 114 43.9
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 1.1e-08 63.5 111 42.3
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 1.1e-08 63.5 101 43.6
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 1.4e-08 63.2 97 44.3
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.4e-08 63.2 117 43.6
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 1.4e-08 63.2 111 40.5
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 1.4e-08 63.2 98 41.8
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 1.8e-08 62.8 113 38.9
Sopen11g003730 Solanum pennellii HOM05D021137 ORTHO05D004438 1.8e-08 62.8 93 44.1
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.4e-08 62.4 100 44.0
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 4.1e-08 61.6 111 41.4
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 5.4e-08 61.2 107 42.1
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 7.0e-08 60.8 111 39.6
Solyc11g007870.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 7.0e-08 60.8 93 44.1
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 9.2e-08 60.5 110 39.1
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 1.6e-07 59.7 71 49.3
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 1.6e-07 59.7 109 37.6
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.6e-07 59.7 110 39.1
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.6e-07 59.7 110 39.1
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.0e-07 59.3 102 44.1
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 2.0e-07 59.3 106 38.7
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 2.7e-07 58.9 101 41.6
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 3.5e-07 58.5 101 41.6
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 5.9e-07 57.8 71 47.9
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 5.9e-07 57.8 68 51.5
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 5.9e-07 57.8 99 40.4
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 7.7e-07 57.4 121 37.2
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.7e-07 57.4 68 51.5
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.7e-07 57.4 68 51.5
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 7.7e-07 57.4 68 51.5
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 7.7e-07 57.4 111 40.5
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 7.7e-07 57.4 53 52.8
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 7.7e-07 57.4 95 36.8
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 1.0e-06 57.0 103 40.8
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.0e-06 57.0 100 38.0
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.3e-06 56.6 105 40.0
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.3e-06 56.6 96 43.8
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 2.3e-06 55.8 107 43.0
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 2.9e-06 55.5 100 37.0
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.9e-06 55.5 100 37.0
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.9e-06 55.5 102 36.3
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.9e-06 55.5 100 37.0
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 2.9e-06 55.5 70 47.1
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.9e-06 55.5 92 42.4
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 6.6e-06 54.3 96 39.6


User provided reference genes

Program Settings