Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.1e-208 728.8 363 100.0
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.1e-205 718.8 363 98.3
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.2e-200 703.0 363 96.4
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 5.5e-177 624.4 359 87.2
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 6.1e-176 620.9 365 86.0
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.0e-175 620.2 369 85.4
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 6.0e-131 471.5 367 67.0
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.2e-126 457.2 367 64.3
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.3e-125 453.8 367 64.6
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 4.1e-124 448.7 367 64.0
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.0e-122 444.1 370 64.1
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 2.3e-122 443.0 374 60.7
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 3.9e-122 442.2 383 61.4
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 8.6e-122 441.0 368 61.4
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 1.1e-121 440.7 368 61.4
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 2.5e-121 439.5 372 62.1
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 3.3e-121 439.1 355 63.4
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 5.6e-121 438.3 362 63.5
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 9.5e-121 437.6 379 62.3
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 9.5e-121 437.6 364 64.0
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 3.6e-120 435.6 375 61.6
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.8e-119 433.3 366 62.8
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 6.8e-119 431.4 371 60.9
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.5e-118 430.3 371 60.4
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 9.9e-118 427.6 377 61.0
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.3e-117 427.2 371 62.8
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.7e-117 426.8 371 61.2
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.2e-117 426.4 368 60.3
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 2.2e-117 426.4 373 60.9
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.9e-117 426.0 361 63.4
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.9e-117 425.2 371 60.9
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 4.9e-117 425.2 368 60.3
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.9e-116 423.3 364 62.1
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 2.4e-116 422.9 360 61.4
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 4.1e-116 422.2 361 61.5
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 9.2e-116 421.0 374 57.8
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.0e-114 417.5 370 60.5
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.3e-114 417.2 353 62.3
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 3.9e-114 415.6 398 55.8
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 5.1e-114 415.2 379 58.8
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 6.6e-114 414.8 355 60.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 8.6e-114 414.5 366 56.6
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 8.6e-114 414.5 356 62.4
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 8.6e-114 414.5 366 58.7
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.1e-113 414.1 351 59.8
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 4.3e-113 412.1 370 58.9
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.2e-112 410.6 366 58.5
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 4.7e-112 408.7 387 58.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 8.1e-112 407.9 375 58.7
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.1e-111 407.5 365 58.6
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 4.0e-111 405.6 438 53.4
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 5.2e-111 405.2 374 57.2
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.5e-110 403.7 370 57.6
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 5.8e-110 401.7 364 56.9
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 9.9e-110 401.0 331 61.3
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 2.9e-109 399.4 376 57.7
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 2.4e-108 396.4 345 60.6
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 5.4e-108 395.2 365 58.4
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 5.4e-108 395.2 355 57.2
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 9.2e-108 394.4 337 58.8
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 1.2e-107 394.0 324 63.6
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 2.1e-107 393.3 387 57.9
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 2.7e-107 392.9 336 58.9
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.7e-107 392.9 325 60.9
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 7.8e-107 391.3 350 58.6
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 8.7e-106 387.9 362 55.2
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.1e-105 387.5 357 57.1
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.5e-105 387.1 345 58.0
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.5e-105 387.1 373 57.6
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.9e-105 386.7 348 58.0
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.5e-105 386.3 367 55.0
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 2.5e-105 386.3 348 58.6
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 9.6e-105 384.4 367 55.3
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.2e-104 384.0 357 56.9
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.2e-104 384.0 357 56.6
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 2.1e-104 383.3 371 56.6
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 3.6e-104 382.5 323 60.7
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 4.7e-104 382.1 339 57.8
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 4.7e-104 382.1 348 57.2
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.1e-103 380.9 339 57.5
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.8e-103 380.2 339 57.5
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.4e-103 379.8 354 57.1
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.2e-101 373.2 343 56.0
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 3.8e-101 372.5 287 63.8
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.6e-99 367.1 289 63.3
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.3e-98 363.2 269 67.7
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.8e-96 356.3 337 58.8
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 4.5e-94 349.0 275 62.9
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.3e-93 347.4 371 54.2
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.7e-93 347.1 371 54.4
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 3.9e-90 335.9 263 63.5
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 9.6e-89 331.3 238 69.3
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 2.4e-87 326.6 393 47.1
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 9.0e-87 324.7 339 52.5
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.4e-86 322.8 341 51.9
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 2.9e-85 319.7 235 68.5
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 5.5e-84 315.5 315 53.0
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 7.1e-84 315.1 280 54.6
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 9.3e-84 314.7 334 51.2
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.6e-83 313.9 181 79.0
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.1e-83 313.5 258 64.3
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 6.9e-79 298.5 167 80.8
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 7.6e-78 295.0 359 49.0
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 2.3e-74 283.5 320 46.9
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 3.0e-74 283.1 300 55.0
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 2.8e-72 276.6 279 52.0
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.2e-54 218.0 227 50.7
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 8.8e-50 201.8 204 55.9
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.6e-43 181.0 113 69.0
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.3e-42 177.2 246 41.1
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 2.7e-38 163.7 203 46.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 9.4e-36 155.2 140 55.7
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 4.7e-35 152.9 197 43.1
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.3e-32 144.8 183 45.9
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.5e-25 121.3 71 81.7
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 5.6e-12 76.3 100 48.0
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 9.5e-12 75.5 63 54.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.4e-10 71.6 78 46.2
Medtr4g025750 Medicago truncatula HOM05D006491 ORTHO05D008317 2.7e-06 57.4 70 45.7
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 2.7e-06 57.4 63 57.1


User provided reference genes

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