Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 4.7e-98 361.3 196 100.0
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.6e-77 293.1 162 92.6
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 2.9e-63 245.7 162 80.2
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 9.2e-62 240.7 169 74.6
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.0e-60 237.3 162 75.9
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 4.8e-42 175.3 169 62.7
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.1e-41 174.1 169 61.5
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 2.4e-41 172.9 162 58.0
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 5.3e-41 171.8 158 63.3
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.2e-40 170.6 166 61.4
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.5e-40 170.2 166 57.2
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 5.8e-40 168.3 163 58.3
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 9.9e-40 167.5 164 57.3
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 1.7e-39 166.8 160 58.8
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 1.7e-39 166.8 163 57.1
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.7e-39 166.8 164 61.0
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.2e-39 166.4 162 58.6
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 2.9e-39 166.0 158 60.8
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.4e-38 162.9 160 56.2
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 7.1e-38 161.4 161 58.4
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 7.1e-38 161.4 152 59.2
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 1.2e-37 160.6 175 53.7
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 2.1e-37 159.8 162 55.6
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 3.5e-37 159.1 146 61.6
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 4.6e-37 158.7 158 57.6
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 7.9e-37 157.9 155 57.4
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.8e-36 156.8 161 55.9
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 3.0e-36 156.0 158 56.3
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 6.7e-36 154.8 160 53.1
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 1.1e-35 154.1 163 52.1
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 1.5e-35 153.7 189 49.7
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.9e-35 153.3 160 51.9
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 2.5e-35 152.9 164 54.3
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 4.3e-35 152.1 161 55.3
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 4.3e-35 152.1 162 54.3
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 5.6e-35 151.8 161 54.7
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.6e-34 150.2 159 55.3
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 2.1e-34 149.8 159 56.6
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.1e-34 149.8 159 55.3
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 2.1e-34 149.8 158 55.1
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.8e-34 149.4 159 56.0
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 3.7e-34 149.1 163 55.8
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 4.8e-34 148.7 156 52.6
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 4.8e-34 148.7 159 54.1
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.8e-33 146.7 160 54.4
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.4e-33 146.4 149 55.7
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 3.1e-33 146.0 159 53.5
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 3.1e-33 146.0 165 53.3
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 6.9e-33 144.8 160 53.1
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 9.0e-33 144.4 160 55.0
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 1.5e-32 143.7 157 52.9
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 3.4e-32 142.5 159 54.7
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 5.8e-32 141.7 159 51.6
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 7.6e-32 141.4 168 48.8
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 9.9e-32 141.0 161 50.3
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.3e-31 140.6 157 51.6
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.3e-31 140.6 158 56.3
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 1.3e-31 140.6 160 53.1
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.7e-31 140.2 152 53.9
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 4.9e-31 138.7 166 51.2
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 4.9e-31 138.7 163 53.4
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 8.4e-31 137.9 122 60.7
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 2.5e-30 136.3 162 50.6
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 4.2e-30 135.6 160 49.4
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 4.2e-30 135.6 159 51.6
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 5.5e-30 135.2 154 50.6
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 7.1e-30 134.8 161 51.6
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.6e-29 133.7 158 52.5
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.1e-29 133.3 168 48.2
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 2.7e-29 132.9 158 50.6
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 2.7e-29 132.9 141 53.2
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 3.5e-29 132.5 158 50.6
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 4.6e-29 132.1 159 51.6
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 4.6e-29 132.1 160 50.0
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 7.9e-29 131.3 162 48.8
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.0e-28 131.0 147 51.0
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.0e-28 131.0 162 50.0
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.3e-28 130.6 146 54.8
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 1.8e-28 130.2 159 50.3
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 6.7e-28 128.3 156 51.3
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 6.7e-28 128.3 159 51.6
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 8.7e-28 127.9 162 49.4
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.5e-27 127.1 157 48.4
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 7.4e-27 124.8 138 50.7
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 1.3e-26 124.0 161 46.6
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 1.3e-26 124.0 161 46.6
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 2.1e-26 123.2 138 50.0
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.1e-26 123.2 138 51.4
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.8e-26 122.9 162 49.4
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 3.7e-26 122.5 190 43.7
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 4.8e-26 122.1 156 50.6
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 4.8e-26 122.1 162 46.9
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 1.1e-25 120.9 158 50.0
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 1.1e-25 120.9 152 47.4
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 9.0e-25 117.9 161 44.1
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 2.0e-24 116.7 158 46.8
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 2.6e-24 116.3 158 46.8
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 4.5e-24 115.5 161 42.9
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 4.5e-24 115.5 156 44.2
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 5.8e-24 115.2 146 44.5
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 7.6e-24 114.8 180 41.7
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 1.3e-23 114.0 159 43.4
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.3e-23 114.0 159 45.9
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 1.7e-23 113.6 162 43.8
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 1.7e-23 113.6 162 43.8
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 4.9e-23 112.1 157 43.9
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 4.9e-23 112.1 157 47.8
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 6.5e-23 111.7 160 45.0
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 8.4e-23 111.3 148 43.2
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 8.4e-23 111.3 165 44.8
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 8.4e-23 111.3 163 43.6
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 8.4e-23 111.3 165 44.8
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 4.2e-22 109.0 148 41.2
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 7.1e-22 108.2 148 41.2
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 7.1e-22 108.2 146 50.0
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 7.1e-22 108.2 146 50.0
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 7.1e-22 108.2 159 39.6
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.7e-21 106.3 146 49.3
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 4.6e-21 105.5 145 42.8
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 4.6e-21 105.5 159 42.8
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.3e-20 104.0 134 47.8
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 3.9e-20 102.4 149 41.6
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 3.9e-20 102.4 154 42.2
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 8.7e-20 101.3 145 40.7
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.1e-19 100.9 124 46.0
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.9e-19 100.1 92 59.8
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.9e-19 100.1 92 59.8
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 4.3e-19 99.0 140 43.6
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 9.7e-19 97.8 136 47.1
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-18 97.4 135 45.2
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 2.2e-18 96.7 131 42.7
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 2.8e-18 96.3 144 43.1
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 2.4e-17 93.2 154 39.6
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 9.0e-17 91.3 142 40.8
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 2.0e-16 90.1 159 37.7
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 5.0e-15 85.5 136 44.1
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 5.0e-15 85.5 161 36.0
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 8.5e-15 84.7 134 44.8
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 9.4e-14 81.3 137 42.3
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 2.1e-13 80.1 137 41.6
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 4.6e-13 79.0 164 31.7
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 7.9e-13 78.2 123 43.9
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.4e-12 77.4 90 47.8
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.3e-12 76.6 156 41.0
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 5.1e-12 75.5 88 51.1
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 6.7e-12 75.1 153 39.9
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 1.1e-11 74.3 76 53.9
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 2.0e-11 73.6 73 47.9
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 4.3e-11 72.4 156 39.7
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 5.7e-11 72.0 156 39.7
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 9.7e-11 71.2 110 39.1
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 1.7e-10 70.5 124 40.3
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.7e-10 69.3 156 39.1
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.7e-10 69.3 156 39.1
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 4.8e-10 68.9 88 47.7
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 6.3e-10 68.6 85 48.2
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.8e-09 67.0 141 32.6
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 2.4e-09 66.6 69 52.2
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 5.0e-07 58.9 64 48.4
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 6.5e-07 58.5 61 49.2
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 4.2e-06 55.8 55 49.1
Medtr8g011510 Medicago truncatula HOM05D004226 ORTHO05D004842 7.2e-06 55.1 132 32.6


User provided reference genes

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