Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 7.7e-129 463.8 226 100.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 5.2e-125 451.1 226 97.3
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 4.1e-122 441.4 219 97.3
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 6.3e-115 417.5 226 87.6
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 9.2e-114 413.7 226 88.1
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 7.3e-111 404.1 226 85.8
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.3e-96 356.7 223 72.2
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 1.5e-95 353.2 210 74.3
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.5e-95 353.2 217 75.1
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 2.8e-94 349.0 226 72.1
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.1e-93 347.1 209 73.7
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 1.4e-93 346.7 214 72.4
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 5.2e-93 344.7 217 72.8
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 1.5e-92 343.2 222 69.8
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 5.8e-92 341.3 210 73.8
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.3e-91 340.1 178 91.0
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.3e-91 340.1 217 71.9
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 1.3e-91 340.1 225 68.4
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 3.7e-91 338.6 212 74.5
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 4.9e-91 338.2 223 69.1
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 6.4e-91 337.8 223 68.2
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 8.3e-91 337.4 225 69.8
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.1e-90 337.0 221 69.7
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.4e-90 336.7 221 69.2
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 1.4e-90 336.7 227 69.6
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 2.4e-90 335.9 224 69.2
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.1e-90 335.1 216 71.3
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 5.4e-90 334.7 212 72.2
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 7.1e-90 334.3 217 72.4
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 7.1e-90 334.3 225 64.9
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 9.2e-90 334.0 221 68.8
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 6.0e-89 331.3 214 70.6
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.3e-88 330.1 216 69.0
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 2.3e-88 329.3 222 68.9
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 2.3e-88 329.3 221 65.6
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 3.0e-88 328.9 203 73.9
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 5.1e-88 328.2 221 66.5
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 8.6e-88 327.4 224 68.8
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 8.6e-88 327.4 222 68.5
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 8.6e-88 327.4 215 69.3
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 3.3e-87 325.5 221 65.2
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 5.6e-87 324.7 221 65.6
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 5.6e-87 324.7 210 69.0
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 9.6e-87 323.9 223 65.9
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 2.1e-86 322.8 215 68.4
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 3.6e-86 322.0 219 65.3
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.4e-85 320.1 225 66.7
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 1.8e-85 319.7 223 69.1
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 2.4e-85 319.3 221 64.7
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 5.2e-85 318.2 226 64.2
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 5.2e-85 318.2 219 67.1
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.2e-84 317.0 180 79.4
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 2.0e-84 316.2 214 68.7
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 2.6e-84 315.8 224 62.9
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 5.8e-84 314.7 216 66.2
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 7.6e-84 314.3 222 67.6
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 2.2e-83 312.8 213 66.2
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 2.9e-83 312.4 210 66.2
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 2.9e-83 312.4 222 63.1
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 3.8e-83 312.0 217 62.7
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 9.3e-82 307.4 214 64.5
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.6e-81 306.6 220 63.6
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.1e-81 306.2 213 65.3
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 3.5e-81 305.4 214 65.4
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 4.6e-81 305.1 214 63.6
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 4.6e-81 305.1 218 65.1
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 6.0e-81 304.7 276 53.6
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 7.8e-81 304.3 214 65.0
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.0e-80 303.9 220 62.7
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.7e-80 303.1 223 62.8
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 2.3e-80 302.8 214 64.0
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 2.3e-80 302.8 220 63.6
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 3.9e-80 302.0 214 63.6
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 5.1e-80 301.6 223 63.2
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 6.6e-80 301.2 219 62.6
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 8.7e-80 300.8 223 62.8
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 8.7e-80 300.8 223 62.8
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 8.7e-80 300.8 223 62.8
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.9e-79 299.7 205 66.8
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.5e-79 299.3 226 61.1
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 7.3e-79 297.7 212 63.2
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 3.6e-78 295.4 213 61.0
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 1.1e-77 293.9 216 61.6
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.1e-77 293.9 214 61.7
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 6.9e-77 291.2 209 63.6
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 2.6e-76 289.3 210 63.3
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 4.9e-75 285.0 209 63.6
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.7e-73 279.3 209 60.8
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 1.7e-72 276.6 207 60.4
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 3.9e-72 275.4 209 58.9
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 6.6e-72 274.6 217 58.5
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 1.9e-71 273.1 223 58.7
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 5.6e-71 271.6 213 58.2
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 2.1e-70 269.6 213 56.8
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 2.4e-69 266.2 181 68.0
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 2.0e-68 263.1 176 68.2
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.7e-67 260.0 224 55.4
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 8.4e-67 257.7 175 67.4
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 3.2e-66 255.8 211 57.3
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 2.5e-63 246.1 215 54.9
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 4.3e-63 245.4 244 48.8
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 7.4e-63 244.6 157 72.0
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 1.6e-62 243.4 224 50.4
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.1e-62 243.0 234 49.6
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.2e-60 237.3 175 60.0
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.5e-58 229.6 215 53.0
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.2e-57 227.3 215 49.3
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.3e-55 219.2 159 61.6
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 7.4e-55 218.0 213 48.4
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 1.6e-54 216.9 164 63.4
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 7.6e-52 208.0 221 43.4
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.0e-51 207.6 211 46.9
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 5.5e-50 201.8 177 55.9
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.5e-47 193.7 208 44.2
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 2.2e-46 189.9 136 61.0
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 5.0e-43 178.7 161 51.6
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.1e-42 177.6 113 70.8
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.2e-30 136.7 130 52.3
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.2e-28 131.0 82 72.0
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.3e-27 127.5 218 31.7
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 1.7e-22 110.5 94 52.1
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 1.7e-22 110.5 221 33.0
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 2.2e-14 83.6 56 64.3
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 2.2e-14 83.6 97 48.5
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 1.2e-12 77.8 44 70.5
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 5.9e-12 75.5 80 51.2
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 2.9e-11 73.2 115 34.8
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 4.9e-06 55.8 46 52.2


User provided reference genes

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