Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g003400 Solanum pennellii HOM05D007680 ORTHO05D009702 5.6e-67 257.7 151 100.0
PGSC0003DMG400027341 Solanum tuberosum HOM05D007680 ORTHO05D009702 1.9e-59 232.6 151 93.4
Oeu060261.1 Olea europaea HOM05D007680 ORTHO05D009702 6.9e-25 117.9 152 50.7
Hma1.2p1_0026F.1_g016760 Hydrangea macrophylla HOM05D007680 ORTHO05D009702 1.7e-23 113.2 152 53.3
vmacro10277 Vaccinium macrocarpon HOM05D007680 ORTHO05D009702 2.5e-22 109.4 142 49.3
SalBow6G1777 Salvia bowleyana HOM05D007680 ORTHO05D009702 3.2e-22 109.0 139 52.5
TAR636G0370 Trochodendron aralioides HOM05D007680 ORTHO05D009702 7.2e-22 107.8 147 54.4
Actinidia31090 Actinidia chinensis HOM05D007680 ORTHO05D009702 9.4e-22 107.5 71 84.5
Manes.05G202400 Manihot esculenta HOM05D007680 ORTHO05D009702 1.2e-21 107.1 146 50.7
Nn2g14013 Nelumbo nucifera HOM05D007680 ORTHO05D009702 2.7e-21 105.9 115 58.3
Migut.F01656 Erythranthe guttata HOM05D007680 ORTHO05D009702 3.6e-21 105.5 150 51.3
Lj2C27T21 Lonicera japonica HOM05D007680 ORTHO05D009702 3.6e-21 105.5 70 80.0
CSS0013494 Camellia sinensis var. sinensis HOM05D007680 ORTHO05D009702 4.7e-21 105.1 71 80.3
ClCG05G021580 Citrullus lanatus HOM05D007680 ORTHO05D009702 7.9e-21 104.4 125 55.2
FAN03G2755 Fragaria x ananassa HOM05D007680 ORTHO05D009702 1.0e-20 104.0 144 51.4
CsaV3_5G035650 Cucumis sativus L. HOM05D007680 ORTHO05D009702 1.4e-20 103.6 132 53.8
Prupe.2G086600 Prunus persica HOM05D007680 ORTHO05D009702 3.0e-20 102.4 157 46.5
HanXRQChr08g0217901 Helianthus annuus HOM05D007680 ORTHO05D009702 5.2e-20 101.7 152 58.6
Sed0005690 Sechium edule HOM05D007680 ORTHO05D009702 5.2e-20 101.7 127 52.8
Potri.010G234900 Populus trichocarpa HOM05D007680 ORTHO05D009702 8.8e-20 100.9 69 81.2
ATR0820G188 Amborella trichopoda HOM05D007680 ORTHO05D009702 2.0e-19 99.8 114 57.9
MELO3C012366.2 Cucumis melo HOM05D007680 ORTHO05D009702 2.0e-19 99.8 159 46.5
unitig_899.g15034 Utricularia gibba HOM05D007680 ORTHO05D009702 4.4e-19 98.6 144 52.1
EL10Ac2g03857 Beta vulgaris HOM05D007680 ORTHO05D009702 7.4e-19 97.8 127 50.4
QL04p041248 Quercus lobata HOM05D007680 ORTHO05D009702 1.3e-18 97.1 70 77.1
Potri.008G025700 Populus trichocarpa HOM05D007680 ORTHO05D009702 1.7e-18 96.7 147 52.4
MD07G1087200 Malus domestica HOM05D007680 ORTHO05D009702 2.8e-18 95.9 156 54.5
RcHm_v2.0_Chr1g0333251 Rosa chinensis HOM05D007680 ORTHO05D009702 3.7e-18 95.5 66 78.8
FAN06G0858 Fragaria x ananassa HOM05D007680 ORTHO05D009702 4.8e-18 95.1 141 49.6
Duzib128G1419 Durio zibethinus HOM05D007680 ORTHO05D009702 6.3e-18 94.7 157 50.3
TAR636G2061 Trochodendron aralioides HOM05D007680 ORTHO05D009702 8.2e-18 94.4 70 77.1
Haze_02610 Corylus avellana HOM05D007680 ORTHO05D009702 1.1e-17 94.0 70 77.1
Dinv30655 Davidia involucrata HOM05D007680 ORTHO05D009702 1.1e-17 94.0 104 51.9
Thecc.10G109800 Theobroma cacao HOM05D007680 ORTHO05D009702 1.1e-17 94.0 142 50.7
Thecc.K0008600 Theobroma cacao HOM05D007680 ORTHO05D009702 1.1e-17 94.0 142 50.7
GSVIVG01034708001 Vitis vinifera HOM05D007680 ORTHO05D009702 1.1e-17 94.0 142 46.5
TAR636G3254 Trochodendron aralioides HOM05D007680 ORTHO05D009702 1.4e-17 93.6 116 55.2
Sc20g0001300 Simmondsia chinensis HOM05D007680 ORTHO05D009702 1.8e-17 93.2 67 71.6
Aqoxy2G01382 Aquilegia oxysepala HOM05D007680 ORTHO05D009702 2.4e-17 92.8 149 47.0
Cfa011226 Carpinus fangiana HOM05D007680 ORTHO05D009702 3.1e-17 92.4 70 75.7
Cpa.g.sc128.47 Carica papaya HOM05D007680 ORTHO05D009702 4.1e-17 92.0 143 51.7
COL.COLO4_33896 Corchorus olitorius HOM05D007680 ORTHO05D009702 4.1e-17 92.0 123 54.5
Gorai.009G304500 Gossypium raimondii HOM05D007680 ORTHO05D009702 4.1e-17 92.0 158 46.2
MBI17_g11658_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 1.6e-16 90.1 71 76.1
Gohir.A05G288200 Gossypium hirsutum HOM05D007680 ORTHO05D009702 2.0e-16 89.7 158 45.6
Gohir.D05G289400 Gossypium hirsutum HOM05D007680 ORTHO05D009702 2.0e-16 89.7 158 45.6
Ciclev10032885m.g Citrus clementina HOM05D007680 ORTHO05D009702 3.5e-16 89.0 66 80.3
Atru.chr12.970 Acer truncatum HOM05D007680 ORTHO05D009702 4.5e-16 88.6 99 58.6
Ah.10g034230 Amaranthus hybridus HOM05D007680 ORTHO05D009702 5.9e-16 88.2 132 44.7
Lalb_Chr01g0010321 Lupinus albus HOM05D007680 ORTHO05D009702 5.9e-16 88.2 70 72.9
Hund17353 Selenicereus undatus HOM05D007680 ORTHO05D009702 1.0e-15 87.4 63 69.8
CDE08G1572 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 1.7e-15 86.7 70 67.1
TWI38G2267 Tripterygium wilfordii HOM05D007680 ORTHO05D009702 1.7e-15 86.7 70 78.6
Medtr1g050700 Medicago truncatula HOM05D007680 ORTHO05D009702 3.8e-15 85.5 70 71.4
Glyma.02G165700 Glycine max HOM05D007680 ORTHO05D009702 5.0e-15 85.1 70 68.6
PSO384G1244 Papaver somniferum HOM05D007680 ORTHO05D009702 5.0e-15 85.1 143 46.2
Phvul.007G245300 Phaseolus vulgaris HOM05D007680 ORTHO05D009702 6.5e-15 84.7 147 46.3
THA.LOC104824894 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 6.5e-15 84.7 66 78.8
THA.LOC104824900 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 6.5e-15 84.7 66 78.8
arahy.Tifrunner.gnm1.ann1.VK4BH4 Arachis hypogaea HOM05D007680 ORTHO05D009702 8.5e-15 84.3 66 72.7
CiPaw.14G028600 Carya illinoinensis HOM05D007680 ORTHO05D009702 1.1e-14 84.0 160 41.9
PGR044G0006 Punica granatum HOM05D007680 ORTHO05D009702 1.5e-14 83.6 157 43.9
VMungo0720G1600 Vigna mungo HOM05D007680 ORTHO05D009702 1.9e-14 83.2 69 69.6
Thhalv10026523m.g Eutrema salsugineum HOM05D007680 ORTHO05D009702 2.5e-14 82.8 117 48.7
TPR.G305 Trifolium pratense HOM05D007680 ORTHO05D009702 2.5e-14 82.8 65 76.9
TPR.G7612 Trifolium pratense HOM05D007680 ORTHO05D009702 2.5e-14 82.8 65 76.9
Lsat_1_v5_gn_2_102521 Lactuca sativa HOM05D007680 ORTHO05D009702 3.2e-14 82.4 133 42.9
CDE02G0611 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 4.2e-14 82.0 129 45.0
Psat6g094320 Pisum sativum HOM05D007680 ORTHO05D009702 7.2e-14 81.3 70 68.6
Sabra10G0182100 Salix brachista HOM05D007680 ORTHO05D009702 7.2e-14 81.3 53 73.6
A01p00970 Brassica napus HOM05D007680 ORTHO05D009702 9.4e-14 80.9 141 48.9
BraA01t00095Z Brassica rapa HOM05D007680 ORTHO05D009702 9.4e-14 80.9 141 48.9
Lalb_Chr19g0129271 Lupinus albus HOM05D007680 ORTHO05D009702 3.6e-13 79.0 69 68.1
Sp7g35810 Schrenkiella parvula HOM05D007680 ORTHO05D009702 6.1e-13 78.2 66 71.2
CARHR246610 Cardamine hirsuta HOM05D007680 ORTHO05D009702 1.8e-12 76.6 108 51.9
AT4G40045 Arabidopsis thaliana HOM05D007680 ORTHO05D009702 4.0e-12 75.5 134 44.0
SEGI_03872 Sequoiadendron giganteum HOM05D007680 ORTHO05D009702 4.0e-12 75.5 59 71.2
AL7G12370 Arabidopsis lyrata HOM05D007680 ORTHO05D009702 5.2e-12 75.1 66 69.7
BolC1t00107H Brassica oleracea HOM05D007680 ORTHO05D009702 2.0e-11 73.2 59 76.3
Carub.0007s0203 Capsella rubella HOM05D007680 ORTHO05D009702 2.6e-11 72.8 66 68.2
C01p01090 Brassica napus HOM05D007680 ORTHO05D009702 4.4e-11 72.0 59 74.6
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 9.7e-11 70.9 35 88.6
AUR62043943 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.7e-10 70.1 119 40.3
SGA_v2.0_scaffold10G05320 Striga asiatica HOM05D007680 ORTHO05D009702 2.8e-10 69.3 108 43.5
MD07G1069500 Malus domestica HOM05D007680 ORTHO05D009702 1.4e-09 67.0 123 43.1
Zm00001eb411120 Zea mays HOM05D007680 ORTHO05D009702 3.5e-08 62.4 65 61.5
Lj6g0009049 Lotus japonicus HOM05D007680 ORTHO05D009702 1.3e-07 60.5 131 38.9
arahy.Tifrunner.gnm1.ann1.UIS3VC Arachis hypogaea HOM05D007680 ORTHO05D009702 2.2e-07 59.7 94 45.7
DCAR_006372 Daucus carota HOM05D007680 ORTHO05D009702 2.9e-07 59.3 107 37.4
Glyma.10G104651 Glycine max HOM05D007680 ORTHO05D009702 2.9e-07 59.3 64 54.7
Zm00001eb004510 Zea mays HOM05D007680 ORTHO05D009702 1.1e-06 57.4 59 62.7
Os12g0206700 Oryza sativa ssp. japonica HOM05D007680 ORTHO05D009702 2.5e-06 56.2 65 55.4


User provided reference genes

Program Settings