Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 2.2e-74 282.3 155 100.0
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 1.8e-68 262.7 152 94.7
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 7.8e-64 247.3 158 88.6
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 5.4e-57 224.6 131 87.8
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 1.3e-50 203.4 151 77.5
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.2e-42 176.0 158 68.4
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 7.8e-40 167.5 164 67.1
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 5.1e-39 164.9 141 68.8
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 1.0e-15 87.4 112 44.6
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.3e-15 87.0 113 45.1
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 3.9e-15 85.5 105 50.5
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 6.7e-15 84.7 122 41.8
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.9e-14 83.2 105 49.5
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 2.5e-14 82.8 111 45.0
Nitab4.5_0001850g0030 Nicotiana tabacum HOM05D009634 ORTHO05D009650 7.4e-14 81.3 67 65.7
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 7.4e-14 81.3 105 44.8
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 7.4e-14 81.3 105 44.8
SGA_v2.0_scaffold13G06494 Striga asiatica HOM05D009634 ORTHO05D009650 9.7e-14 80.9 114 43.0
Migut.F00890 Erythranthe guttata HOM05D009634 ORTHO05D009650 3.7e-13 79.0 107 44.9
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 1.1e-12 77.4 131 40.5
Migut.F00892 Erythranthe guttata HOM05D009634 ORTHO05D009650 6.9e-12 74.7 106 44.3
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 6.9e-12 74.7 118 39.0
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 3.4e-11 72.4 124 37.9
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 1.0e-10 70.9 106 41.5
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 2.9e-10 69.3 130 38.5
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 2.9e-10 69.3 117 38.5
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 3.8e-10 68.9 135 38.5
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 1.1e-09 67.4 114 39.5
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 1.4e-09 67.0 133 36.1
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 3.2e-09 65.9 116 35.3
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 4.2e-09 65.5 137 32.1
Migut.F00891 Erythranthe guttata HOM05D009634 ORTHO05D009650 5.5e-09 65.1 126 37.3
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 5.5e-09 65.1 112 36.6
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 2.1e-08 63.2 112 35.7
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 3.6e-08 62.4 113 33.6
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.0e-07 60.8 119 33.6
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 1.4e-07 60.5 155 35.5
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.8e-07 60.1 106 37.7
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 1.8e-07 60.1 142 34.5
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 2.3e-07 59.7 162 32.1
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 3.9e-07 58.9 121 35.5
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 5.1e-07 58.5 113 32.7
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 5.1e-07 58.5 113 32.7
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 5.1e-07 58.5 106 37.7
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 6.7e-07 58.2 106 37.7
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 6.7e-07 58.2 107 39.3
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 6.7e-07 58.2 105 35.2
Ah.04g163690 Amaranthus hybridus HOM05D009634 ORTHO05D009650 8.8e-07 57.8 90 38.9
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 8.8e-07 57.8 113 31.9
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 1.5e-06 57.0 104 33.7
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.0e-06 56.6 113 31.9
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 4.3e-06 55.5 115 32.2
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 9.7e-06 54.3 99 37.4


User provided reference genes

Program Settings