Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 4.2e-212 741.1 379 100.0
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 6.7e-210 733.8 379 98.7
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 9.4e-196 686.8 379 91.6
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 1.5e-193 679.5 379 90.2
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 4.4e-193 677.9 379 89.7
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 1.2e-163 580.1 379 74.7
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 4.7e-163 578.2 379 73.4
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 8.3e-160 567.4 379 76.8
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 7.8e-158 560.8 376 72.1
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 1.6e-155 553.1 375 70.4
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 1.1e-154 550.4 379 70.2
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 1.4e-154 550.1 361 72.9
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 1.4e-154 550.1 375 70.9
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 2.3e-154 549.3 376 71.0
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 4.0e-154 548.5 376 70.2
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 8.9e-154 547.4 376 70.7
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 1.3e-152 543.5 376 70.2
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 3.7e-152 542.0 376 69.4
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 4.9e-152 541.6 376 70.5
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 6.4e-152 541.2 376 71.5
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 1.4e-151 540.0 376 68.4
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 2.4e-151 539.3 375 69.3
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 2.4e-151 539.3 379 69.9
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 5.4e-151 538.1 375 68.3
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 5.4e-151 538.1 376 68.6
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 9.2e-151 537.3 379 69.1
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 1.2e-150 537.0 375 70.1
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 2.1e-150 536.2 376 68.6
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 2.7e-150 535.8 378 66.9
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 2.7e-150 535.8 377 68.2
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 2.7e-150 535.8 375 68.0
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 5.1e-149 531.6 375 67.2
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 5.1e-149 531.6 375 67.5
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 1.1e-148 530.4 376 68.4
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 1.2e-147 526.9 375 67.7
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 1.6e-147 526.6 379 67.0
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 1.8e-146 523.1 429 62.2
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 3.1e-146 522.3 376 68.4
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 1.3e-144 516.9 379 63.9
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 2.2e-144 516.2 376 68.4
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 2.9e-144 515.8 375 66.1
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 4.9e-144 515.0 379 67.8
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.1e-143 513.8 385 64.4
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 1.4e-143 513.5 380 64.7
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 1.4e-143 513.5 380 66.3
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 4.1e-143 511.9 376 65.4
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 1.2e-142 510.4 380 65.5
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 1.6e-142 510.0 375 66.9
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 1.0e-141 507.3 375 65.1
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 1.3e-141 506.9 375 66.9
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 2.3e-141 506.1 380 62.4
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 1.9e-140 503.1 375 66.4
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 5.6e-140 501.5 379 62.8
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 5.6e-140 501.5 380 64.5
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 7.3e-140 501.1 380 62.4
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 1.2e-139 500.4 375 65.6
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 2.1e-139 499.6 379 62.0
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 2.8e-139 499.2 380 62.1
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 2.8e-139 499.2 379 62.8
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 2.8e-139 499.2 373 65.1
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 2.8e-139 499.2 376 65.4
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 3.6e-139 498.8 380 61.8
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 8.1e-139 497.7 380 61.8
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 8.1e-139 497.7 380 61.8
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 8.1e-139 497.7 379 61.7
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 8.1e-139 497.7 379 62.8
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 1.1e-138 497.3 379 62.5
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 1.4e-138 496.9 375 63.2
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 3.1e-138 495.7 378 64.0
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 9.0e-138 494.2 379 62.5
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 1.5e-137 493.4 381 62.7
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 1.5e-137 493.4 373 65.1
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 4.4e-137 491.9 379 61.2
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 4.4e-137 491.9 375 64.0
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 1.3e-136 490.3 375 63.7
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 2.4e-135 486.1 406 60.1
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 2.1e-134 483.0 379 62.0
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 2.1e-134 483.0 380 61.6
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 1.1e-132 477.2 378 60.8
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 2.5e-132 476.1 376 61.2
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 8.1e-131 471.1 365 64.4
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 2.4e-130 469.5 427 56.2
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 4.0e-130 468.8 377 61.8
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 2.6e-129 466.1 398 59.3
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 7.1e-127 458.0 375 61.3
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 6.0e-126 454.9 376 58.0
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 2.8e-123 446.0 316 67.1
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 2.0e-121 439.9 375 58.4
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 4.5e-121 438.7 379 58.3
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 2.4e-119 433.0 368 56.5
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 1.2e-118 430.6 375 57.3
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 2.6e-113 412.9 385 56.1
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 3.4e-105 386.0 266 68.4
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 2.3e-101 373.2 376 48.7
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 8.8e-101 371.3 272 66.2
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 6.3e-99 365.2 372 50.3
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 1.8e-90 337.0 406 47.8
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 2.2e-88 330.1 276 60.5
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 2.6e-81 306.6 191 75.4
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 1.7e-80 303.9 371 43.4
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 6.3e-75 285.4 263 57.0
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 8.3e-67 258.5 368 38.9
Aqoxy3G01225 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 2.2e-51 207.2 166 63.3
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 1.1e-50 204.9 222 49.1
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 1.1e-50 204.9 222 49.1
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 3.9e-48 196.4 169 53.8
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 1.2e-46 191.4 379 39.6
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 2.3e-45 187.2 124 66.9
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 6.8e-45 185.7 138 62.3
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 7.0e-42 175.6 112 68.8
Cc02_g21910 Coffea canephora HOM05D005972 ORTHO05D007548 7.0e-42 175.6 135 65.9
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 6.6e-40 169.1 124 65.3
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 6.0e-33 146.0 371 30.5
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 2.3e-32 144.1 109 71.6
HanXRQChr15g0481161 Helianthus annuus HOM05D005972 ORTHO05D007548 3.3e-31 140.2 119 57.1
CSS0032497 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D007548 1.8e-21 107.8 82 70.7
CBR_g51824 Chara braunii HOM05D005972 ORTHO05D007548 1.7e-19 101.3 355 25.9
CAN.G1940.2 Capsicum annuum HOM05D005972 ORTHO05D007548 1.3e-16 91.7 51 82.4
COL.COLO4_10012 Corchorus olitorius HOM05D005972 ORTHO05D007548 8.7e-16 89.0 74 63.5
CSS0030864 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 7.3e-15 85.9 73 67.1
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 1.3e-14 85.1 50 86.0
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 1.4e-13 81.6 52 80.8
A05p16910 Brassica napus HOM05D005972 ORTHO05D007548 2.0e-12 77.8 54 68.5
Zm00001eb076720 Zea mays HOM05D005972 ORTHO05D007548 2.0e-12 77.8 114 45.6
CAN.G730.13 Capsicum annuum HOM05D005972 ORTHO05D007548 7.1e-10 69.3 36 91.7
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 4.6e-09 66.6 44 75.0
CAN.G2846.2 Capsicum annuum HOM05D005972 ORTHO05D007548 4.6e-09 66.6 50 70.0
arahy.Tifrunner.gnm1.ann1.YJH68W Arachis hypogaea HOM05D005972 ORTHO05D083016 3.0e-08 63.9 48 66.7
arahy.Tifrunner.gnm1.ann1.03MD5J Arachis hypogaea HOM05D000575 ORTHO05D011349 5.1e-08 63.2 62 56.5
Gohir.D12G253500 Gossypium hirsutum HOM05D002314 ORTHO05D002538 1.1e-07 62.0 161 34.8
Gorai.008G271000 Gossypium raimondii HOM05D002314 ORTHO05D002538 1.1e-07 62.0 161 34.8
Gohir.A12G252000 Gossypium hirsutum HOM05D002314 ORTHO05D002538 1.5e-07 61.6 161 34.8
MD07G1284500 Malus domestica HOM05D002314 ORTHO05D002538 2.5e-07 60.8 378 26.5
COL.COLO4_35660 Corchorus olitorius HOM05D002314 ORTHO05D002538 4.3e-07 60.1 220 28.6
MD01G1214800 Malus domestica HOM05D002314 ORTHO05D002538 5.6e-07 59.7 378 26.2
arahy.Tifrunner.gnm1.ann1.9A5XZY Arachis hypogaea HOM05D005972 ORTHO05D031493 7.4e-07 59.3 39 74.4
Prupe.2G306700 Prunus persica HOM05D002314 ORTHO05D002538 7.4e-07 59.3 378 26.2
Thecc.03G192300 Theobroma cacao HOM05D002314 ORTHO05D002538 7.4e-07 59.3 161 33.5
MCO11G815 Micromonas commoda HOM05D000406 ORTHO05D002714 9.6e-07 58.9 282 26.6
A07p45510 Brassica napus HOM05D001142 ORTHO05D004628 1.6e-06 58.2 278 26.6
C06p54340 Brassica napus HOM05D001142 ORTHO05D004628 1.6e-06 58.2 278 26.3
BolC6t40445H Brassica oleracea HOM05D001142 ORTHO05D004628 1.6e-06 58.2 278 26.3
BraA07t32053Z Brassica rapa HOM05D001142 ORTHO05D004628 1.6e-06 58.2 278 26.6
DCAR_020299 Daucus carota HOM05D002314 ORTHO05D002538 1.6e-06 58.2 175 30.3
COL.COLO4_29892 Corchorus olitorius HOM05D005972 ORTHO05D007548 2.1e-06 57.8 53 52.8
ATR1100G004 Amborella trichopoda HOM05D002314 ORTHO05D002538 2.8e-06 57.4 161 31.7
Duzib205G0270 Durio zibethinus HOM05D002314 ORTHO05D002538 2.8e-06 57.4 160 30.0
BcaB04g18277 Brassica carinata HOM05D001003 ORTHO05D002734 3.7e-06 57.0 39 69.2
BcaC08g47559 Brassica carinata HOM05D001142 ORTHO05D004628 3.7e-06 57.0 271 26.6
Cpa.g.c40727 Carica papaya HOM05D005972 ORTHO05D007548 4.8e-06 56.6 46 58.7
Thhalv10018951m.g Eutrema salsugineum HOM05D001142 ORTHO05D004628 4.8e-06 56.6 272 26.8
Migut.F00246 Erythranthe guttata HOM05D002314 ORTHO05D002538 8.1e-06 55.8 150 33.3
Gorai.006G098000 Gossypium raimondii HOM05D001142 ORTHO05D004628 8.1e-06 55.8 283 21.6


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