Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 0.0e+00 1637.5 847 100.0
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 0.0e+00 1568.5 847 96.0
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 0.0e+00 1536.5 864 92.9
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 0.0e+00 1217.2 878 76.7
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1107.8 797 76.0
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1081.2 822 72.9
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 8.0e-288 993.8 947 61.6
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 2.7e-126 457.2 860 39.9
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 9.3e-119 432.2 923 36.5
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 3.0e-117 427.2 917 37.9
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 1.8e-114 417.9 599 44.1
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 5.9e-113 412.9 815 37.9
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 7.2e-111 406.0 851 36.4
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 1.6e-110 404.8 816 37.1
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 1.8e-109 401.4 832 37.0
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 1.7e-107 394.8 856 36.8
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 2.4e-106 391.0 852 36.2
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 2.6e-105 387.5 841 37.8
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 5.9e-105 386.3 836 36.5
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 8.5e-104 382.5 892 35.1
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.1e-103 382.1 858 36.4
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 2.1e-102 377.9 894 35.3
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.8e-101 374.8 859 35.6
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 3.0e-101 374.0 851 36.0
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 6.7e-101 372.9 851 35.7
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 3.7e-99 367.1 503 45.7
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 6.3e-99 366.3 870 33.4
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.1e-98 365.5 842 34.4
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 2.0e-97 361.3 843 35.0
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.1e-95 355.5 850 35.9
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 1.1e-95 355.5 546 43.6
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.9e-95 354.8 608 41.3
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 2.7e-94 350.9 861 34.5
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.7e-94 350.9 694 37.2
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 3.6e-94 350.5 669 36.8
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 1.4e-93 348.6 863 34.1
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.3e-93 347.8 846 35.0
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 3.9e-93 347.1 854 32.9
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 5.2e-93 346.7 846 34.3
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 6.7e-93 346.3 873 35.1
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 4.4e-92 343.6 858 34.4
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 2.8e-91 340.9 802 34.3
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 3.7e-91 340.5 854 34.0
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 4.1e-90 337.0 884 34.6
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 7.0e-90 336.3 642 37.7
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.2e-89 335.5 836 33.3
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 7.7e-89 332.8 915 33.4
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 3.8e-88 330.5 593 38.3
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 5.0e-88 330.1 790 34.7
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 5.0e-88 330.1 837 33.8
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 3.2e-87 327.4 903 33.8
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.2e-86 325.5 898 33.2
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 1.2e-86 325.5 787 33.5
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.6e-86 325.1 804 33.7
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 3.0e-85 320.9 602 39.9
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 5.2e-85 320.1 853 33.1
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 8.3e-83 312.8 883 31.6
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 1.1e-82 312.4 773 34.4
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 3.1e-82 310.8 829 31.7
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 9.1e-82 309.3 814 32.8
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 1.2e-81 308.9 814 32.6
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.6e-81 308.5 776 33.1
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 2.7e-81 307.8 821 34.2
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 2.7e-81 307.8 824 33.9
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 2.5e-79 301.2 848 31.4
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 2.5e-79 301.2 838 32.3
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 3.2e-79 300.8 789 32.8
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 3.2e-79 300.8 826 33.3
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 4.2e-79 300.4 875 32.0
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 3.6e-78 297.4 792 33.1
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 6.8e-77 293.1 798 32.7
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 5.7e-76 290.0 570 37.5
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 9.8e-76 289.3 913 30.3
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.7e-75 288.5 567 37.7
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 3.1e-74 284.3 868 30.6
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 6.1e-70 270.0 984 29.8
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 7.5e-68 263.1 959 30.2
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 9.8e-68 262.7 758 31.1
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 1.7e-67 261.9 293 51.9
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 2.2e-67 261.5 959 30.4
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.1e-63 249.2 849 30.0
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 2.8e-62 244.6 578 35.1
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 4.7e-62 243.8 886 30.8
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 8.0e-62 243.0 790 30.0
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 2.3e-61 241.5 835 29.8
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 2.6e-60 238.0 840 29.9
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 5.8e-60 236.9 672 34.4
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 8.3e-59 233.0 837 30.0
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 2.4e-58 231.5 809 28.3
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 7.8e-57 226.5 844 29.5
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 1.9e-55 221.9 832 28.7
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 1.9e-55 221.9 832 28.7
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 3.1e-53 214.5 829 27.9
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 1.2e-52 212.6 830 28.8
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.9e-51 208.0 803 28.9
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 9.2e-50 203.0 571 31.3
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.7e-48 198.7 571 31.0
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 2.3e-48 198.4 816 28.8
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 5.6e-47 193.7 522 32.6
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 9.5e-47 193.0 518 31.5
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 2.0e-44 185.3 662 29.8
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 9.9e-44 183.0 519 30.1
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 3.7e-43 181.0 548 28.6
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 5.4e-42 177.2 673 30.8
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 8.6e-40 169.9 646 29.1
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 1.5e-39 169.1 647 29.7
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 6.8e-37 160.2 159 55.3
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 4.6e-25 120.9 194 41.8
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.1e-15 89.7 137 39.4
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.6e-09 69.3 115 35.7
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 6.0e-09 67.4 427 24.1
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 6.0e-09 67.4 427 24.1
FvH4_5g06191 Fragaria vesca HOM05D001393 ORTHO05D007477 1.8e-08 65.9 73 52.1


User provided reference genes

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