Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002970 Solanum pennellii HOM05D009680 ORTHO05D000653 9.0e-53 209.9 101 100.0
Solyc11g007050.1 Solanum lycopersicum HOM05D009680 ORTHO05D000653 1.1e-47 193.0 101 91.1
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 1.1e-18 96.7 85 50.6
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 1.1e-18 96.7 99 49.5
CAN.G1513.6 Capsicum annuum HOM05D009680 ORTHO05D010443 3.2e-18 95.1 109 50.5
CAN.G630.1 Capsicum annuum HOM05D009680 ORTHO05D010443 1.2e-17 93.2 107 46.7
Peaxi162Scf01517g00130 Petunia axillaris HOM05D009680 ORTHO05D010443 1.6e-17 92.8 96 41.7
CAN.G630.2 Capsicum annuum HOM05D009680 ORTHO05D000653 2.1e-17 92.4 86 52.3
Peaxi162Scf00620g00517 Petunia axillaris HOM05D009680 ORTHO05D010443 1.8e-16 89.4 109 40.4
PGSC0003DMG400005142 Solanum tuberosum HOM05D009680 ORTHO05D010443 3.0e-16 88.6 85 48.2
PGSC0003DMG400026953 Solanum tuberosum HOM05D009680 ORTHO05D010443 3.0e-16 88.6 89 50.6
CAN.G630.3 Capsicum annuum HOM05D009680 ORTHO05D010443 6.7e-16 87.4 92 47.8
Nitab4.5_0006484g0030 Nicotiana tabacum HOM05D009680 ORTHO05D000653 6.7e-16 87.4 89 44.9
Peaxi162Scf00620g00054 Petunia axillaris HOM05D009680 ORTHO05D010443 6.7e-16 87.4 110 40.0
Sopen08g028370 Solanum pennellii HOM05D000015 ORTHO05D000803 8.8e-16 87.0 91 45.1
Solyc08g080020.1 Solanum lycopersicum HOM05D009680 ORTHO05D010443 3.3e-15 85.1 102 41.2
CAN.G630.4 Capsicum annuum HOM05D009680 ORTHO05D010443 7.4e-15 84.0 91 46.2
PGSC0003DMG400026952 Solanum tuberosum HOM05D009680 ORTHO05D010443 2.8e-14 82.0 92 43.5
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 1.6e-12 76.3 85 44.7
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 7.7e-12 73.9 84 46.4
Gorai.009G297300 Gossypium raimondii HOM05D001004 ORTHO05D000653 1.0e-11 73.6 85 43.5
Cfa010162 Carpinus fangiana HOM05D009680 ORTHO05D000653 1.3e-11 73.2 84 44.0
CAN.G630.38 Capsicum annuum HOM05D009680 ORTHO05D010443 2.2e-11 72.4 89 42.7
Oeu017852.1 Olea europaea HOM05D001004 ORTHO05D000653 2.2e-11 72.4 88 44.3
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 2.9e-11 72.0 88 43.2
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 3.8e-11 71.6 85 41.2
Carub.0003s2826 Capsella rubella HOM05D001004 ORTHO05D000653 5.0e-11 71.2 88 43.2
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 6.5e-11 70.9 88 43.2
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 6.5e-11 70.9 88 42.0
Oeu017850.1 Olea europaea HOM05D001004 ORTHO05D000653 8.5e-11 70.5 85 45.9
CAN.G630.39 Capsicum annuum HOM05D009680 ORTHO05D010443 1.1e-10 70.1 89 41.6
TAR376G0093 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.1e-10 70.1 85 43.5
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 5.5e-10 67.8 89 43.8
Eucgr.H05126 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.2e-10 67.4 65 47.7
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 9.4e-10 67.0 85 42.4
Migut.L00816 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.2e-09 66.6 88 43.2
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 1.2e-09 66.6 89 44.9
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 1.2e-09 66.6 89 44.9
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.2e-09 66.6 87 36.8
Migut.D01298 Erythranthe guttata HOM05D009680 ORTHO05D000653 1.6e-09 66.2 80 48.8
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 1.6e-09 66.2 86 45.3
RcHm_v2.0_Chr2g0105871 Rosa chinensis HOM05D001004 ORTHO05D000653 1.6e-09 66.2 86 48.8
FAN28G2625 Fragaria x ananassa HOM05D001004 ORTHO05D000653 2.1e-09 65.9 68 54.4
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 2.7e-09 65.5 83 42.2
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 2.7e-09 65.5 83 42.2
Migut.C00659 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.7e-09 65.5 85 41.2
Migut.F00732 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.7e-09 65.5 84 46.4
Migut.H02350 Erythranthe guttata HOM05D009680 ORTHO05D000653 2.7e-09 65.5 87 43.7
PSO170G3861 Papaver somniferum HOM05D001004 ORTHO05D000653 4.7e-09 64.7 79 45.6
Eucgr.H02107 Eucalyptus grandis HOM05D001004 ORTHO05D000653 6.1e-09 64.3 65 50.8
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 8.0e-09 63.9 86 38.4
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.0e-08 63.5 83 44.6
Eucgr.H05137 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.0e-08 63.5 65 49.2
Nn1g02639 Nelumbo nucifera HOM05D001004 ORTHO05D000653 1.0e-08 63.5 73 49.3
CARHR155430 Cardamine hirsuta HOM05D001004 ORTHO05D000653 1.4e-08 63.2 84 39.3
Migut.C00655 Erythranthe guttata HOM05D009680 ORTHO05D000653 3.0e-08 62.0 86 39.5
AUR62010425 Chenopodium quinoa HOM05D001004 ORTHO05D000653 4.0e-08 61.6 68 51.5
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.0e-08 61.6 85 38.8
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 4.0e-08 61.6 72 45.8
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 6.7e-08 60.8 90 41.1
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 8.8e-08 60.5 88 37.5
Nn3g18474 Nelumbo nucifera HOM05D001004 ORTHO05D000653 8.8e-08 60.5 72 43.1
COL.COLO4_12152 Corchorus olitorius HOM05D001004 ORTHO05D000653 1.1e-07 60.1 75 48.0
COL.COLO4_12156 Corchorus olitorius HOM05D001004 ORTHO05D000653 1.1e-07 60.1 74 47.3
SEGI_07667 Sequoiadendron giganteum HOM05D001004 ORTHO05D000653 1.1e-07 60.1 78 46.2
FvH4_1g16190 Fragaria vesca HOM05D001004 ORTHO05D000653 1.5e-07 59.7 86 43.0
FAN26G2526 Fragaria x ananassa HOM05D001004 ORTHO05D000653 1.5e-07 59.7 86 43.0
Medtr1g070335 Medicago truncatula HOM05D001004 ORTHO05D000653 1.5e-07 59.7 71 42.3
Potri.010G075600 Populus trichocarpa HOM05D001004 ORTHO05D000653 1.5e-07 59.7 69 47.8
Cc07_g18340 Coffea canephora HOM05D001004 ORTHO05D000653 2.0e-07 59.3 85 38.8
Medtr1g075410 Medicago truncatula HOM05D001004 ORTHO05D000653 2.6e-07 58.9 69 47.8
Nn3g18475 Nelumbo nucifera HOM05D001004 ORTHO05D000653 2.6e-07 58.9 72 50.0
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 2.6e-07 58.9 67 47.8
Peaxi162Scf79264g00001 Petunia axillaris HOM05D008628 ORTHO05D010443 2.6e-07 58.9 67 47.8
COL.COLO4_38468 Corchorus olitorius HOM05D001004 ORTHO05D000653 3.3e-07 58.5 73 43.8
Glyma.09G103800 Glycine max HOM05D001004 ORTHO05D000653 3.3e-07 58.5 65 44.6
QL06p015886 Quercus lobata HOM05D001004 ORTHO05D000653 3.3e-07 58.5 68 45.6
COL.COLO4_12159 Corchorus olitorius HOM05D001004 ORTHO05D000653 4.4e-07 58.2 73 46.6
Eucgr.H00190 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.4e-07 58.2 69 47.8
Potri.010G075200 Populus trichocarpa HOM05D001004 ORTHO05D000653 4.4e-07 58.2 69 46.4
Potri.010G075800 Populus trichocarpa HOM05D001004 ORTHO05D000653 4.4e-07 58.2 74 45.9
MD13G1208300 Malus domestica HOM05D001004 ORTHO05D000653 5.7e-07 57.8 72 45.8
TPR.G31260 Trifolium pratense HOM05D001004 ORTHO05D000653 5.7e-07 57.8 70 50.0
Potri.010G075400 Populus trichocarpa HOM05D001004 ORTHO05D000653 7.5e-07 57.4 69 44.9
Sabra10G0033600 Salix brachista HOM05D001004 ORTHO05D000653 9.7e-07 57.0 69 46.4
Dinv44642 Davidia involucrata HOM05D001004 ORTHO05D000653 1.3e-06 56.6 72 45.8
Prupe.8G229400 Prunus persica HOM05D001004 ORTHO05D000653 1.3e-06 56.6 73 42.5
TPR.G31261 Trifolium pratense HOM05D001004 ORTHO05D000653 1.3e-06 56.6 69 47.8
C02p55360 Brassica napus HOM05D001004 ORTHO05D000653 1.7e-06 56.2 78 42.3
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.7e-06 56.2 73 46.6
Migut.B00982 Erythranthe guttata HOM05D009680 ORTHO05D000653 1.7e-06 56.2 86 39.5
Lj5g0010722 Lotus japonicus HOM05D001004 ORTHO05D000653 1.7e-06 56.2 69 46.4
Phvul.007G125500 Phaseolus vulgaris HOM05D001004 ORTHO05D000653 2.2e-06 55.8 69 46.4
Cc03_g04970 Coffea canephora HOM05D001004 ORTHO05D000653 2.8e-06 55.5 65 43.1
MELO3C018349.2 Cucumis melo HOM05D001004 ORTHO05D000653 2.8e-06 55.5 69 40.6
Lsat_1_v5_gn_1_35961 Lactuca sativa HOM05D001004 ORTHO05D000653 2.8e-06 55.5 87 40.2
Psat4g107840 Pisum sativum HOM05D001004 ORTHO05D000653 2.8e-06 55.5 69 44.9
Sed0019846 Sechium edule HOM05D001004 ORTHO05D000653 2.8e-06 55.5 73 46.6
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 2.8e-06 55.5 69 44.9
AUR62006912 Chenopodium quinoa HOM05D001004 ORTHO05D000653 3.7e-06 55.1 86 41.9
Glyma.13G120600 Glycine max HOM05D001004 ORTHO05D000653 3.7e-06 55.1 73 43.8
Manes.05G086328 Manihot esculenta HOM05D001004 ORTHO05D000653 3.7e-06 55.1 69 42.0
AL5G30140 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 4.8e-06 54.7 91 37.4
ClCG07G000780 Citrullus lanatus HOM05D007791 ORTHO05D044567 4.8e-06 54.7 67 43.3
CsaV3_5G013330 Cucumis sativus L. HOM05D001004 ORTHO05D000653 4.8e-06 54.7 69 40.6
Sopen09g032430 Solanum pennellii HOM05D001004 ORTHO05D000653 4.8e-06 54.7 70 44.3
TPR.G9059 Trifolium pratense HOM05D001004 ORTHO05D000653 4.8e-06 54.7 69 40.6
AT3G50020 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 6.3e-06 54.3 91 37.4
Cc03_g04980 Coffea canephora HOM05D001004 ORTHO05D000653 6.3e-06 54.3 69 40.6
COL.COLO4_38469 Corchorus olitorius HOM05D001004 ORTHO05D000653 6.3e-06 54.3 70 44.3
MELO3C031605.2 Cucumis melo HOM05D001004 ORTHO05D000653 6.3e-06 54.3 65 44.6
CsaV3_3G012540 Cucumis sativus L. HOM05D001004 ORTHO05D000653 6.3e-06 54.3 69 43.5
Glyma.10G184700 Glycine max HOM05D001004 ORTHO05D000653 6.3e-06 54.3 69 44.9
Manes.01G200000 Manihot esculenta HOM05D000077 ORTHO05D000552 6.3e-06 54.3 65 44.6
Potri.010G075300 Populus trichocarpa HOM05D001004 ORTHO05D000653 6.3e-06 54.3 72 43.1
Potri.010G075501 Populus trichocarpa HOM05D001004 ORTHO05D000653 6.3e-06 54.3 72 43.1
Sed0013106 Sechium edule HOM05D001004 ORTHO05D000653 6.3e-06 54.3 70 47.1
arahy.Tifrunner.gnm1.ann1.T5EZBY Arachis hypogaea HOM05D001004 ORTHO05D000653 8.2e-06 53.9 69 44.9
Haze_10651 Corylus avellana HOM05D001004 ORTHO05D000653 8.2e-06 53.9 61 41.0
Nitab4.5_0010303g0010 Nicotiana tabacum HOM05D009680 ORTHO05D010443 8.2e-06 53.9 76 38.2


User provided reference genes

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