Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.5e-99 366.3 199 100.0
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 3.1e-73 278.9 168 89.9
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 9.3e-70 267.3 168 87.5
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 1.9e-54 216.5 169 76.3
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 4.7e-53 211.8 145 81.4
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 3.9e-52 208.8 117 98.3
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 1.1e-51 207.2 123 91.1
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.4e-41 173.7 176 58.5
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 3.1e-41 172.6 173 56.1
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 3.1e-41 172.6 173 57.8
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 1.2e-40 170.6 174 54.0
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.7e-40 169.5 176 57.4
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.3e-39 167.2 173 55.5
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 1.7e-39 166.8 175 57.7
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 5.0e-39 165.2 172 54.7
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 9.4e-38 161.0 173 53.2
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 2.7e-37 159.5 173 54.9
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 8.0e-37 157.9 175 50.9
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 8.0e-37 157.9 175 55.4
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.0e-36 157.5 173 54.3
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 2.3e-36 156.4 174 54.0
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 3.0e-36 156.0 175 50.3
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 4.0e-36 155.6 173 53.2
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 6.8e-36 154.8 173 52.0
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 1.5e-35 153.7 173 51.4
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.5e-35 153.7 173 51.4
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 2.0e-35 153.3 172 53.5
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 2.0e-35 153.3 179 50.3
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 2.0e-35 153.3 173 51.4
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 2.6e-35 152.9 173 49.7
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 2.6e-35 152.9 170 52.4
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 2.6e-35 152.9 171 51.5
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 3.4e-35 152.5 173 52.0
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 3.4e-35 152.5 175 52.6
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 3.4e-35 152.5 173 51.4
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 4.4e-35 152.1 173 49.7
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 7.5e-35 151.4 173 53.2
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 1.3e-34 150.6 171 52.0
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.3e-34 150.6 173 49.1
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 3.7e-34 149.1 173 52.6
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 1.4e-33 147.1 173 45.1
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 5.4e-33 145.2 175 47.4
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 7.0e-33 144.8 171 53.2
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 2.7e-32 142.9 164 49.4
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 5.9e-32 141.7 168 49.4
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 7.7e-32 141.4 171 48.5
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.0e-31 141.0 173 46.8
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 1.3e-31 140.6 178 47.2
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.7e-31 140.2 164 48.8
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 3.8e-31 139.0 173 46.2
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 2.5e-30 136.3 172 46.5
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 3.2e-30 136.0 168 49.4
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 4.2e-30 135.6 178 45.5
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 9.5e-30 134.4 179 48.0
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 1.6e-29 133.7 192 43.8
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 2.1e-29 133.3 170 46.5
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 8.0e-29 131.3 175 45.7
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 1.0e-28 131.0 175 47.4
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 1.4e-28 130.6 175 45.7
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 4.0e-28 129.0 167 47.3
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 6.8e-28 128.3 142 50.0
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 4.4e-27 125.6 171 44.4
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 3.7e-26 122.5 171 43.9
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 4.9e-26 122.1 171 43.3
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 4.9e-26 122.1 174 44.3
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 4.9e-26 122.1 173 42.2
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.4e-25 120.6 171 42.7
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 1.4e-25 120.6 177 42.9
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 1.4e-25 120.6 174 43.1
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 1.4e-25 120.6 171 44.4
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.8e-25 120.2 173 43.9
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 2.4e-25 119.8 173 42.2
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 3.1e-25 119.4 171 41.5
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 1.2e-24 117.5 171 41.5
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.2e-24 117.5 194 38.1
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 2.7e-24 116.3 174 42.5
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 5.9e-24 115.2 173 46.8
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 2.3e-23 113.2 169 40.8
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 2.3e-23 113.2 169 40.8
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 2.3e-23 113.2 169 40.8
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 5.0e-23 112.1 139 46.0
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 6.6e-23 111.7 121 52.1
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 1.1e-22 110.9 181 40.3
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 1.5e-22 110.5 179 40.8
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.5e-22 110.5 74 79.7
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 3.3e-22 109.4 169 39.6
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 3.3e-22 109.4 180 40.0
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 4.3e-22 109.0 201 38.8
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 4.3e-22 109.0 180 40.0
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 9.5e-22 107.8 180 39.4
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 2.1e-21 106.7 120 47.5
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 2.8e-21 106.3 117 47.0
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 1.4e-20 104.0 181 39.2
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.8e-20 103.6 124 45.2
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 3.0e-20 102.8 178 39.3
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 5.2e-20 102.1 180 38.3
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 5.2e-20 102.1 181 39.2
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 5.2e-20 102.1 180 36.1
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 1.5e-19 100.5 127 44.9
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 2.0e-19 100.1 128 45.3
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 8.3e-18 94.7 138 47.8
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 1.6e-16 90.5 145 42.1
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 1.2e-13 80.9 137 37.2
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.8e-13 79.7 165 37.0
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 3.1e-12 76.3 110 40.0
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 4.0e-12 75.9 170 33.5
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 6.8e-12 75.1 167 31.7
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 2.6e-11 73.2 126 38.1
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 3.4e-11 72.8 84 51.2
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 7.5e-11 71.6 103 41.7
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 1.3e-10 70.9 168 30.4
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 6.4e-10 68.6 43 83.7
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 8.3e-10 68.2 173 30.1
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 2.7e-08 63.2 73 49.3
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 2.3e-07 60.1 71 54.9
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 2.3e-07 60.1 119 36.1
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 7.3e-06 55.1 160 31.9


User provided reference genes

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