Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 5.7e-175 617.5 308 100.0
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 3.1e-173 611.7 308 99.0
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 7.5e-167 590.5 308 96.1
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 6.3e-158 560.8 308 89.6
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 5.4e-157 557.8 308 89.3
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 1.2e-151 540.0 308 87.3
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 8.3e-150 533.9 308 87.0
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.1e-136 488.8 309 77.0
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.1e-136 488.8 309 77.0
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 5.2e-136 488.0 309 76.4
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.2e-134 482.6 306 76.5
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 4.9e-134 481.5 310 74.5
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 1.9e-133 479.6 308 76.6
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 6.0e-132 474.6 306 74.2
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 6.0e-132 474.6 306 74.5
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 2.3e-131 472.6 304 75.0
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 5.0e-131 471.5 308 76.0
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 8.6e-131 470.7 306 72.2
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 1.1e-130 470.3 306 74.5
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 2.5e-130 469.2 303 74.9
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 2.5e-130 469.2 302 74.8
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 5.6e-130 468.0 306 75.2
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 5.6e-130 468.0 307 74.3
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 7.3e-130 467.6 306 73.9
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 7.3e-130 467.6 306 71.6
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 7.3e-130 467.6 306 74.8
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 1.6e-129 466.5 305 73.1
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 2.1e-129 466.1 306 74.5
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 2.1e-129 466.1 306 73.2
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 1.4e-128 463.4 307 74.3
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 5.2e-128 461.5 307 73.9
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 5.2e-128 461.5 310 73.5
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 8.9e-128 460.7 306 73.2
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 1.5e-127 459.9 307 75.2
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 2.0e-127 459.5 305 72.1
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 4.4e-127 458.4 306 71.9
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 5.8e-127 458.0 310 73.2
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 7.5e-127 457.6 306 72.2
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 9.9e-127 457.2 306 72.5
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 9.9e-127 457.2 306 73.5
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.3e-126 456.8 307 73.0
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 1.7e-126 456.4 307 73.0
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 1.7e-126 456.4 308 74.0
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 6.4e-126 454.5 309 73.5
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 8.3e-126 454.1 307 72.0
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 1.1e-125 453.8 319 69.9
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 1.9e-125 453.0 307 71.0
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 1.9e-125 453.0 305 72.1
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.9e-125 453.0 307 73.3
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 5.4e-125 451.4 303 71.0
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 5.4e-125 451.4 307 72.0
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 7.1e-125 451.1 309 74.1
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 7.1e-125 451.1 306 71.6
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 9.2e-125 450.7 306 71.2
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 4.6e-124 448.4 350 64.9
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 4.6e-124 448.4 305 71.5
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 6.0e-124 448.0 305 70.8
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 1.0e-123 447.2 317 72.2
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 1.0e-123 447.2 306 70.9
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 1.3e-123 446.8 305 71.5
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 6.6e-123 444.5 305 71.1
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 2.5e-122 442.6 307 69.4
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 3.3e-122 442.2 307 69.4
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 7.3e-122 441.0 307 69.1
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 7.3e-122 441.0 325 69.8
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 7.3e-122 441.0 307 69.1
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 1.6e-121 439.9 305 68.5
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 4.7e-121 438.3 309 68.6
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 4.7e-121 438.3 307 69.4
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 4.7e-121 438.3 307 69.4
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 8.1e-121 437.6 309 68.3
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 2.4e-120 436.0 304 68.4
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 2.4e-120 436.0 307 68.7
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 3.1e-120 435.6 309 68.0
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 5.2e-120 434.9 304 68.1
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 5.2e-120 434.9 305 69.5
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 8.9e-120 434.1 304 68.4
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 1.5e-119 433.3 305 68.2
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 3.4e-119 432.2 304 67.1
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 5.8e-119 431.4 305 66.2
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 9.9e-119 430.6 304 67.8
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 9.9e-119 430.6 304 67.8
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 1.3e-118 430.3 323 66.3
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 2.9e-118 429.1 328 61.6
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 2.9e-118 429.1 305 65.9
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 6.4e-118 427.9 307 68.7
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 6.4e-118 427.9 340 65.0
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.1e-117 427.2 309 69.3
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 1.4e-117 426.8 306 68.6
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 3.2e-117 425.6 381 59.6
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.2e-116 423.7 275 74.9
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 8.7e-115 417.5 271 72.3
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 2.8e-113 412.5 302 65.2
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 6.4e-110 401.4 304 66.4
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 1.9e-109 399.8 302 64.2
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.4e-109 399.4 285 69.8
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 1.2e-108 397.1 311 64.3
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 3.5e-108 395.6 287 68.3
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 3.0e-107 392.5 240 79.2
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 4.8e-105 385.2 245 77.6
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 4.8e-105 385.2 306 64.1
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 3.4e-103 379.0 245 76.3
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 1.3e-97 360.5 305 60.0
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 3.7e-97 359.0 306 61.1
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 4.5e-95 352.1 241 68.5
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 6.9e-88 328.2 209 76.1
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 1.3e-86 323.9 304 55.6
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 2.5e-85 319.7 302 53.3
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 1.1e-82 310.8 211 70.1
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 2.5e-82 309.7 301 53.8
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 4.5e-79 298.9 304 53.3
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 1.3e-70 270.8 291 47.4
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 5.7e-58 228.8 148 74.3
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 1.2e-55 221.1 319 42.3
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.0e-55 220.3 146 74.0
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 1.3e-54 217.6 180 55.6
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 7.2e-53 211.8 290 39.3
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 7.0e-48 195.3 156 60.3
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 8.3e-41 171.8 184 53.3
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.6e-39 167.5 149 58.4
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 8.6e-38 161.8 149 57.7
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 5.0e-30 136.0 95 68.4
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 9.5e-29 131.7 96 66.7
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 6.8e-27 125.6 100 63.0
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 6.2e-20 102.4 67 76.1
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 8.0e-20 102.1 69 69.6
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.1e-19 101.7 64 73.4
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 5.8e-18 95.9 70 57.1
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 9.8e-18 95.1 59 74.6
DCAR_021657 Daucus carota HOM05D000572 ORTHO05D002399 7.8e-07 58.9 76 51.3


User provided reference genes

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