Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 3.6e-85 318.2 154 100.0
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 1.4e-84 316.2 154 98.7
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 9.8e-75 283.5 151 92.1
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 4.9e-66 254.6 154 81.8
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.4e-65 252.3 141 84.4
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 9.2e-57 223.8 141 76.6
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 2.0e-56 222.6 143 74.8
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 3.3e-54 215.3 141 74.5
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 7.3e-54 214.2 137 72.3
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 7.3e-54 214.2 134 74.6
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 2.1e-53 212.6 143 69.2
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 6.1e-53 211.1 138 72.5
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 6.1e-53 211.1 138 72.5
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 1.4e-52 209.9 137 71.5
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.4e-52 209.9 134 75.4
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.8e-52 209.5 134 75.4
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.8e-52 209.5 135 74.1
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 2.3e-52 209.1 134 75.4
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 2.3e-52 209.1 134 75.4
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 2.3e-52 209.1 137 75.2
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 2.3e-52 209.1 134 76.9
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 3.1e-52 208.8 141 70.2
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 4.0e-52 208.4 134 74.6
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 5.2e-52 208.0 137 70.8
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 8.9e-52 207.2 134 71.6
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 8.9e-52 207.2 137 70.1
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 8.9e-52 207.2 134 71.6
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.2e-51 206.8 137 70.1
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.5e-51 206.5 137 70.1
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.0e-51 206.1 137 70.1
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 2.6e-51 205.7 137 68.6
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 2.6e-51 205.7 137 68.6
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 2.6e-51 205.7 137 68.6
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 2.6e-51 205.7 134 71.6
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 3.4e-51 205.3 134 73.9
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 3.4e-51 205.3 142 69.7
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 4.4e-51 204.9 133 72.9
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 5.8e-51 204.5 134 73.9
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 7.5e-51 204.1 143 67.1
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 9.8e-51 203.8 137 69.3
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 9.8e-51 203.8 137 70.8
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 1.3e-50 203.4 137 69.3
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 1.3e-50 203.4 137 69.3
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.7e-50 203.0 137 68.6
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 2.9e-50 202.2 149 66.4
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 2.9e-50 202.2 134 71.6
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 3.7e-50 201.8 137 74.5
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 3.7e-50 201.8 143 66.4
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 3.7e-50 201.8 149 67.1
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 4.9e-50 201.4 139 69.1
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 6.4e-50 201.1 140 69.3
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 6.4e-50 201.1 134 72.4
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 8.3e-50 200.7 134 72.4
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 8.3e-50 200.7 134 69.4
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 1.1e-49 200.3 137 67.9
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.4e-49 199.9 149 65.8
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.9e-49 199.5 134 70.9
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.9e-49 199.5 145 66.2
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 1.9e-49 199.5 134 70.9
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.9e-49 199.5 153 65.4
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 2.4e-49 199.1 134 73.1
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 2.4e-49 199.1 167 61.7
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 2.4e-49 199.1 134 67.2
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 3.2e-49 198.7 134 70.1
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 3.2e-49 198.7 134 72.4
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 4.1e-49 198.4 152 63.2
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 5.4e-49 198.0 138 66.7
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 9.2e-49 197.2 134 70.1
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 1.2e-48 196.8 134 71.6
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.6e-48 196.4 145 65.5
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 1.6e-48 196.4 137 67.2
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.6e-48 196.4 137 70.1
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 3.5e-48 195.3 143 62.9
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 4.6e-48 194.9 142 63.4
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 6.0e-48 194.5 134 70.9
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 6.0e-48 194.5 137 68.6
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 7.8e-48 194.1 137 65.7
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.0e-47 193.7 137 67.2
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 3.9e-47 191.8 137 65.0
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 6.6e-47 191.0 134 68.7
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 6.6e-47 191.0 137 65.7
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 1.5e-46 189.9 143 66.4
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 2.5e-46 189.1 137 64.2
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.8e-44 183.0 140 65.0
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.9e-42 174.9 138 61.6
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 6.4e-42 174.5 123 66.7
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 8.3e-42 174.1 138 61.6
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 7.1e-41 171.0 143 62.9
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 1.2e-40 170.2 137 60.6
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.2e-40 170.2 111 73.0
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.1e-40 169.5 134 59.7
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.5e-40 168.7 134 62.7
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 7.8e-40 167.5 143 59.4
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.9e-38 162.9 125 64.0
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.2e-37 160.2 108 71.3
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.8e-37 159.1 134 57.5
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 6.4e-34 147.9 140 55.0
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 6.4e-34 147.9 135 57.8
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 2.8e-29 132.5 103 63.1
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.8e-28 129.8 103 61.2
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 1.4e-20 103.6 118 51.7
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 9.9e-19 97.4 143 37.8
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.9e-18 95.9 84 58.3
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 5.4e-17 91.7 63 66.7
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 3.0e-15 85.9 63 69.8
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 3.4e-11 72.4 85 50.6
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 5.6e-06 55.1 34 73.5


User provided reference genes

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