Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 5.3e-173 610.9 306 100.0
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 5.0e-171 604.4 306 98.7
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 6.7e-160 567.4 306 92.2
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 2.1e-153 545.8 307 89.3
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.8e-144 516.2 341 77.7
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.8e-131 471.9 265 88.7
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 2.5e-130 469.2 302 76.2
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 3.7e-126 455.3 306 74.2
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.4e-125 453.4 306 72.2
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.0e-123 447.2 296 73.3
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.7e-123 446.4 294 73.5
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.7e-123 446.4 309 71.5
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 5.0e-123 444.9 293 74.1
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.5e-122 443.4 302 70.5
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.5e-122 443.4 312 72.1
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 4.3e-122 441.8 291 73.2
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 9.5e-122 440.7 306 71.6
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 2.8e-121 439.1 315 71.4
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 6.1e-121 438.0 306 69.9
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.0e-120 437.2 293 73.0
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.4e-120 436.8 304 72.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.8e-120 436.4 289 72.0
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 2.3e-120 436.0 293 72.4
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 4.0e-120 435.3 295 70.8
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 6.8e-120 434.5 300 70.3
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.0e-119 433.0 289 71.3
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 4.4e-119 431.8 294 71.4
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 4.4e-119 431.8 292 71.2
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 5.8e-119 431.4 289 71.3
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 5.8e-119 431.4 290 72.4
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 7.5e-119 431.0 290 71.7
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.2e-118 429.5 295 71.2
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 2.9e-118 429.1 290 70.3
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.9e-118 429.1 289 71.3
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 3.7e-118 428.7 289 71.3
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 4.9e-118 428.3 291 70.4
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 2.4e-117 426.0 296 69.3
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.2e-116 423.7 292 70.5
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.6e-116 423.3 305 68.2
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 2.0e-116 422.9 294 69.7
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.0e-116 422.9 274 75.2
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 2.7e-116 422.5 294 69.0
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 2.7e-116 422.5 293 69.6
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 3.5e-116 422.2 295 69.8
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.0e-115 420.6 294 68.7
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.3e-115 420.2 289 70.2
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.7e-115 419.9 289 70.6
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 2.3e-115 419.5 289 70.6
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 2.3e-115 419.5 324 64.2
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 5.0e-115 418.3 305 67.2
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.3e-114 415.6 290 69.0
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 7.3e-114 414.5 296 69.6
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 2.8e-113 412.5 298 67.4
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 3.6e-113 412.1 282 70.9
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.8e-112 409.8 298 67.4
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 4.0e-112 408.7 289 69.2
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 5.2e-112 408.3 290 68.3
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 8.9e-112 407.5 306 67.6
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.2e-111 407.1 295 67.1
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.2e-111 407.1 295 67.1
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.5e-111 406.8 363 60.6
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.5e-111 406.8 331 61.6
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 2.0e-111 406.4 299 67.9
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 2.0e-111 406.4 287 68.6
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 3.4e-111 405.6 307 65.8
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 4.4e-111 405.2 305 65.2
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 9.8e-111 404.1 289 69.6
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 2.9e-110 402.5 299 65.9
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.9e-110 402.5 208 96.6
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 4.9e-110 401.7 295 66.1
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 4.1e-109 398.7 308 67.5
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 6.0e-108 394.8 305 64.9
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.0e-107 394.0 297 65.0
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 2.3e-107 392.9 287 66.2
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 3.9e-107 392.1 300 64.3
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 4.3e-106 388.7 298 64.4
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 5.6e-106 388.3 303 65.0
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 7.3e-106 387.9 301 64.5
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.6e-105 386.7 297 65.0
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.1e-105 386.3 290 64.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 4.0e-104 382.1 301 64.1
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 4.0e-104 382.1 288 67.0
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 3.5e-100 369.0 271 66.4
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 3.6e-97 359.0 268 66.8
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 6.2e-97 358.2 287 62.4
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 8.1e-97 357.8 290 61.0
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.8e-96 356.7 275 66.2
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.4e-96 356.3 291 62.5
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-95 354.0 283 63.6
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.6e-92 342.0 300 60.3
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 4.6e-92 342.0 221 73.8
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.9e-91 339.0 195 87.7
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.7e-89 332.0 272 63.2
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.4e-88 330.5 266 59.8
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 6.0e-84 315.1 293 58.0
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 7.1e-77 291.6 389 42.2
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.2e-76 290.8 253 61.3
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 4.6e-60 235.7 160 71.2
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.1e-56 224.6 266 48.5
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 3.1e-56 223.0 146 74.0
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 4.2e-53 212.6 150 69.3
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 7.9e-52 208.4 142 68.3
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.2e-45 186.0 253 45.5
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.8e-43 180.6 135 65.2
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 9.1e-40 168.3 108 72.2
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.0e-38 164.9 107 71.0
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.0e-38 162.5 183 51.4
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.5e-38 162.2 183 51.4
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 4.1e-32 142.9 89 76.4
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.2e-30 137.1 82 78.0
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 2.3e-27 127.1 89 66.3
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.3e-22 111.3 66 77.3
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 6.8e-19 99.0 57 80.7
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.6e-18 97.1 144 42.4
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.1e-16 90.1 81 56.8
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.0e-11 75.1 63 58.7
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.0e-11 73.2 56 62.5
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 2.2e-09 67.4 41 73.2
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.6e-07 61.2 45 68.9
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.0e-07 60.8 81 40.7
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.3e-06 58.2 44 63.6


User provided reference genes

Program Settings