Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 7.9e-258 893.3 452 100.0
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.1e-250 868.6 441 99.3
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 6.9e-246 853.6 452 95.1
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 2.8e-210 735.3 454 81.5
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 3.3e-195 685.3 458 76.2
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.9e-191 672.2 452 76.1
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 4.9e-191 671.4 452 76.5
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 2.7e-141 506.1 447 62.0
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 4.6e-141 505.4 460 60.2
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 5.3e-137 491.9 451 57.9
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 1.5e-136 490.3 444 59.9
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.6e-136 489.6 453 58.5
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 1.2e-133 480.7 456 57.9
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 1.0e-132 477.6 459 58.8
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 1.8e-132 476.9 443 57.1
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 8.8e-132 474.6 452 56.4
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 8.8e-132 474.6 452 56.2
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.7e-131 471.9 457 57.1
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.4e-131 471.5 457 56.2
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 1.7e-130 470.3 457 56.0
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 2.8e-130 469.5 453 57.2
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 6.3e-130 468.4 457 56.5
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 6.3e-130 468.4 456 56.8
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 6.3e-130 468.4 462 57.4
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 1.4e-129 467.2 417 58.8
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.4e-129 467.2 457 55.8
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 4.1e-129 465.7 453 55.6
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 3.4e-128 462.6 462 56.1
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 4.5e-128 462.2 462 55.4
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 7.7e-128 461.5 463 57.0
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 1.0e-127 461.1 459 57.7
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 1.0e-127 461.1 462 55.0
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 1.0e-127 461.1 456 56.1
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 1.3e-127 460.7 445 54.8
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 2.9e-127 459.5 463 56.8
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.8e-127 459.1 387 61.0
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 3.2e-126 456.1 395 59.7
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 5.5e-126 455.3 413 58.6
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.6e-125 453.8 459 55.6
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 2.1e-125 453.4 457 56.2
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 2.7e-125 453.0 454 56.2
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 6.7e-124 448.4 462 55.2
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.5e-123 447.2 464 53.4
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 3.3e-123 446.0 446 54.0
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 9.7e-123 444.5 469 54.6
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 2.2e-122 443.4 459 53.6
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 3.7e-122 442.6 456 56.6
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 4.1e-121 439.1 436 55.3
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 7.0e-121 438.3 458 55.5
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 1.5e-120 437.2 460 54.3
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 1.5e-120 437.2 459 55.1
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 1.5e-120 437.2 453 55.0
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 5.9e-120 435.3 476 52.5
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 6.5e-119 431.8 448 55.4
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 1.1e-118 431.0 443 54.0
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 3.2e-118 429.5 396 56.3
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 2.1e-117 426.8 459 52.7
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 2.1e-117 426.8 389 58.1
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 2.7e-117 426.4 459 52.5
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 6.1e-117 425.2 464 50.6
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 8.0e-117 424.9 459 52.3
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 8.0e-117 424.9 459 52.3
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 1.0e-116 424.5 459 52.3
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 1.8e-116 423.7 445 50.3
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 2.3e-116 423.3 445 50.3
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 5.2e-116 422.2 400 56.5
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 6.7e-116 421.8 436 52.5
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 6.7e-116 421.8 456 50.7
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 4.8e-114 415.6 455 51.4
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 9.1e-113 411.4 423 53.9
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 9.1e-113 411.4 460 50.9
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.2e-112 411.0 404 55.9
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 3.5e-112 409.5 458 51.7
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.0e-111 407.9 437 51.7
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 6.5e-111 405.2 430 52.1
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.2e-110 402.9 455 51.0
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.1e-109 400.2 458 49.6
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 6.1e-109 398.7 454 50.0
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 6.1e-109 398.7 457 49.9
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 1.0e-108 397.9 415 52.5
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 4.0e-108 396.0 416 52.6
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 4.4e-107 392.5 462 49.4
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 9.7e-107 391.3 464 50.0
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.7e-106 390.6 457 50.3
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.2e-106 390.2 457 50.3
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 3.7e-106 389.4 455 49.5
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 6.3e-106 388.7 463 50.1
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.1e-105 387.9 450 49.6
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.4e-105 387.5 457 49.0
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 4.1e-105 386.0 468 49.1
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 7.0e-105 385.2 458 47.8
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 2.5e-102 376.7 458 48.0
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 2.5e-102 376.7 458 48.0
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 7.2e-102 375.2 400 51.5
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 7.2e-102 375.2 451 47.2
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.4e-100 370.9 373 58.4
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.0e-99 367.1 389 52.7
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 5.7e-99 365.5 455 49.5
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 9.1e-97 358.2 342 57.0
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 1.2e-96 357.8 343 54.8
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 1.2e-96 357.8 329 56.8
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 5.7e-91 339.0 342 53.5
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.8e-89 334.0 369 49.6
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 2.4e-89 333.6 423 47.0
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 4.0e-84 316.2 458 44.8
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 4.0e-84 316.2 333 54.4
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 1.1e-78 298.1 411 46.2
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.8e-76 290.8 366 47.3
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 1.2e-72 278.1 336 50.3
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 1.7e-71 274.2 449 40.1
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.8e-68 264.2 463 42.5
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 3.1e-68 263.5 404 38.6
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 4.1e-65 253.1 255 53.7
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 3.3e-62 243.4 228 55.3
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 5.4e-57 226.1 206 57.8
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 7.1e-57 225.7 408 37.3
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 5.6e-54 216.1 299 46.8
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.6e-53 214.5 384 37.2
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 5.3e-52 209.5 420 35.0
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 5.8e-51 206.1 237 47.3
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 1.3e-47 194.9 466 33.9
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 6.5e-26 122.9 420 29.0
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 2.4e-20 104.4 262 33.2
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 2.0e-19 101.3 108 53.7
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 4.5e-19 100.1 390 25.9
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 2.9e-18 97.4 407 27.3
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 1.4e-17 95.1 169 37.3
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 2.3e-15 87.8 163 32.5
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.4e-12 78.6 225 28.0
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 7.2e-09 66.2 79 43.0


User provided reference genes

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