Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 4.3e-57 224.6 122 100.0
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 6.1e-56 220.7 122 98.4
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 3.4e-54 214.9 122 95.1
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 1.3e-53 213.0 122 94.3
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 4.9e-53 211.1 122 93.4
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.4e-52 209.5 122 92.6
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 1.6e-51 206.1 122 90.2
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 2.3e-47 192.2 120 83.3
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 5.2e-47 191.0 122 81.1
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 6.8e-47 190.7 122 82.0
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 8.9e-47 190.3 122 82.0
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.5e-46 189.5 122 81.1
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.0e-46 189.1 122 81.1
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 2.0e-46 189.1 122 77.9
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 2.6e-46 188.7 120 81.7
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 2.6e-46 188.7 122 78.7
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 3.4e-46 188.3 122 81.1
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 5.8e-46 187.6 122 78.7
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 5.8e-46 187.6 122 77.9
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 5.8e-46 187.6 122 77.9
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 7.5e-46 187.2 122 79.5
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 7.5e-46 187.2 120 80.8
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 9.8e-46 186.8 122 80.3
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 9.8e-46 186.8 122 80.3
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 9.8e-46 186.8 122 80.3
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 1.3e-45 186.4 122 79.5
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.7e-45 186.0 122 77.0
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 1.7e-45 186.0 122 79.5
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 2.2e-45 185.7 122 79.5
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 2.2e-45 185.7 120 79.2
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 2.9e-45 185.3 122 79.5
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 2.9e-45 185.3 122 78.7
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 3.7e-45 184.9 122 78.7
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 3.7e-45 184.9 122 78.7
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 3.7e-45 184.9 122 79.5
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 3.7e-45 184.9 120 79.2
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 8.3e-45 183.7 122 79.5
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 1.1e-44 183.3 120 80.0
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 1.1e-44 183.3 122 77.0
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 1.4e-44 183.0 122 77.9
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 1.4e-44 183.0 122 77.9
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 1.9e-44 182.6 120 78.3
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 2.4e-44 182.2 122 77.9
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 2.4e-44 182.2 120 79.2
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.2e-44 181.8 122 77.0
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 4.1e-44 181.4 120 77.5
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 4.1e-44 181.4 115 79.1
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 4.1e-44 181.4 121 77.7
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 5.4e-44 181.0 120 80.0
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 5.4e-44 181.0 120 77.5
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 7.1e-44 180.6 119 78.2
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 7.1e-44 180.6 122 76.2
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 7.1e-44 180.6 122 75.4
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 9.2e-44 180.3 120 79.2
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 1.2e-43 179.9 122 78.7
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.6e-43 179.5 122 76.2
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 2.1e-43 179.1 122 75.4
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 2.1e-43 179.1 120 78.3
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 2.1e-43 179.1 120 78.3
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 4.6e-43 177.9 120 79.2
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 6.0e-43 177.6 122 75.4
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 6.0e-43 177.6 122 74.6
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 2.3e-42 175.6 122 73.0
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 3.0e-42 175.3 122 77.0
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 3.0e-42 175.3 120 76.7
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 3.9e-42 174.9 122 72.1
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 3.9e-42 174.9 122 73.0
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 3.9e-42 174.9 120 78.3
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 6.6e-42 174.1 122 73.0
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 8.6e-42 173.7 109 81.7
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 1.5e-41 172.9 121 74.4
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 1.9e-41 172.6 122 72.1
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 2.5e-41 172.2 122 73.0
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 2.5e-41 172.2 122 72.1
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 3.3e-41 171.8 122 71.3
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 3.3e-41 171.8 122 72.1
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 4.3e-41 171.4 123 72.4
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 4.3e-41 171.4 123 74.0
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 4.3e-41 171.4 123 74.0
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 4.3e-41 171.4 115 77.4
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 7.3e-41 170.6 122 71.3
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 7.3e-41 170.6 122 70.5
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 9.5e-41 170.2 122 72.1
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 9.5e-41 170.2 121 72.7
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 1.6e-40 169.5 122 71.3
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 2.1e-40 169.1 122 71.3
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 2.1e-40 169.1 122 71.3
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 4.7e-40 167.9 122 71.3
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 8.1e-40 167.2 123 72.4
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 6.8e-39 164.1 122 69.7
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 6.8e-39 164.1 172 57.0
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 8.9e-39 163.7 122 70.5
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 8.9e-39 163.7 122 68.9
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 3.4e-38 161.8 121 70.2
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 3.4e-38 161.8 121 70.2
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 5.8e-38 161.0 121 70.2
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 5.8e-38 161.0 121 70.2
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 7.6e-38 160.6 122 69.7
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 9.9e-38 160.2 120 70.0
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.7e-37 159.5 122 68.0
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 6.4e-37 157.5 148 60.8
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 6.4e-37 157.5 122 68.9
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 1.1e-36 156.8 118 67.8
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 1.2e-35 153.3 122 68.0
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 3.5e-35 151.8 135 63.0
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 1.3e-34 149.8 131 61.8
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 3.0e-34 148.7 119 62.2
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 4.3e-33 144.8 122 63.9
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 7.3e-33 144.1 121 61.2
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 6.2e-32 141.0 94 78.7
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 8.1e-32 140.6 91 76.9
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.8e-31 139.4 91 79.1
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 3.1e-31 138.7 91 79.1
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 2.6e-30 135.6 104 65.4
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 3.8e-29 131.7 101 66.3
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 1.9e-28 129.4 91 72.5
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 1.6e-24 116.3 125 56.0
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 5.3e-23 111.3 69 78.3
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 3.8e-21 105.1 70 74.3
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 1.1e-17 93.6 62 75.8
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.5e-14 83.2 46 80.4
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 2.6e-14 82.4 58 72.4
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 2.6e-14 82.4 52 82.7
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 6.7e-10 67.8 52 71.2
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.4e-07 60.1 34 79.4
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 1.5e-06 56.6 51 60.8


User provided reference genes

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