Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 5.1e-84 314.7 198 100.0
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 3.9e-76 288.5 185 95.1
PGSC0003DMG400017597 Solanum tuberosum HOM05D000217 ORTHO05D000121 1.5e-59 233.4 164 89.6
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 2.4e-41 172.9 200 68.5
Nitab4.5_0002073g0060 Nicotiana tabacum HOM05D000217 ORTHO05D000121 3.1e-33 146.0 183 67.2
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 1.6e-32 143.7 196 64.3
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 2.9e-31 139.4 198 63.6
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 1.1e-27 127.5 196 60.7
Peaxi162Scf00597g00826 Petunia axillaris HOM05D007476 ORTHO05D006998 4.1e-17 92.4 197 51.8
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 5.4e-17 92.0 130 60.8
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 5.4e-17 92.0 198 48.0
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 9.1e-17 91.3 196 47.4
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 7.7e-16 88.2 198 46.5
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 3.8e-15 85.9 193 46.6
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 5.0e-15 85.5 195 46.7
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 5.0e-15 85.5 183 44.8
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 9.4e-14 81.3 210 38.6
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 1.2e-13 80.9 132 48.5
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.1e-13 80.1 175 42.9
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 3.6e-13 79.3 195 48.2
Nitab4.5_0000643g0260 Nicotiana tabacum HOM05D007476 ORTHO05D006998 3.6e-13 79.3 197 50.8
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 1.4e-12 77.4 193 44.0
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 1.8e-12 77.0 140 53.6
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.8e-12 77.0 193 44.0
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 4.0e-12 75.9 222 41.4
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 8.8e-12 74.7 221 45.2
vmacro20080 Vaccinium macrocarpon HOM05D007476 ORTHO05D006998 2.6e-11 73.2 201 46.8
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 3.4e-11 72.8 188 47.3
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 1.3e-10 70.9 234 41.0
Nitab4.5_0008580g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 6.3e-10 68.6 164 51.8
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.8e-09 67.0 198 42.9
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.1e-09 66.2 176 42.0
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 3.1e-09 66.2 202 47.5
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 4.1e-09 65.9 199 48.7
PGR004G1949 Punica granatum HOM05D007476 ORTHO05D006998 1.2e-08 64.3 207 39.6
Atru.chr8.2515 Acer truncatum HOM05D007476 ORTHO05D006998 1.6e-08 63.9 219 37.4
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 2.0e-08 63.5 196 44.4
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 3.5e-08 62.8 219 37.0
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 3.5e-08 62.8 118 51.7
TAR375G0914 Trochodendron aralioides HOM05D000137 ORTHO05D000382 4.5e-08 62.4 51 64.7
BcaB05g21871 Brassica carinata HOM05D010138 ORTHO05D006998 5.9e-08 62.0 148 48.6
Migut.J00397 Erythranthe guttata HOM05D020465 ORTHO05D006998 5.9e-08 62.0 197 43.7
CANSAT80G1705 Cannabis sativa HOM05D007476 ORTHO05D006998 1.0e-07 61.2 215 33.0
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 1.3e-07 60.8 105 57.1
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 1.3e-07 60.8 202 46.0
GSVIVG01025570001 Vitis vinifera HOM05D007476 ORTHO05D006998 1.3e-07 60.8 116 54.3
Cc06_g03350 Coffea canephora HOM05D007476 ORTHO05D006998 2.3e-07 60.1 210 41.9
Oeu026075.1 Olea europaea HOM05D007476 ORTHO05D006998 2.3e-07 60.1 204 40.7
CSS0046323 Camellia sinensis var. sinensis HOM05D007476 ORTHO05D006998 3.8e-07 59.3 195 46.2
Potri.006G134000 Populus trichocarpa HOM05D007476 ORTHO05D006998 6.6e-07 58.5 161 50.3
Nn2g12939 Nelumbo nucifera HOM05D007476 ORTHO05D006998 8.6e-07 58.2 123 41.5
TWI74G1466 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 8.6e-07 58.2 210 43.8
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 1.1e-06 57.8 199 42.7
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 1.1e-06 57.8 77 61.0
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 1.1e-06 57.8 200 40.0
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 1.9e-06 57.0 177 45.2
BcaNung03275 Brassica carinata HOM05D010138 ORTHO05D006998 2.5e-06 56.6 168 44.6
Eucgr.K03190 Eucalyptus grandis HOM05D007476 ORTHO05D006998 4.3e-06 55.8 123 48.0
HanXRQChr07g0195971 Helianthus annuus HOM05D007476 ORTHO05D006998 9.5e-06 54.7 73 61.6
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 9.5e-06 54.7 243 37.9


User provided reference genes

Program Settings