Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g034330 Solanum pennellii HOM05D007791 ORTHO05D028502 1.4e-43 179.1 85 100.0
PGSC0003DMG400011009 Solanum tuberosum HOM05D007791 ORTHO05D028502 2.5e-40 168.3 85 94.1
CAN.G324.21 Capsicum annuum HOM05D007791 ORTHO05D028502 7.1e-35 150.2 85 78.8
Hma1.2p1_0766F.1_g215310 Hydrangea macrophylla HOM05D007791 ORTHO05D028502 8.7e-17 90.1 64 64.1
Migut.J00302 Erythranthe guttata HOM05D007791 ORTHO05D000653 1.1e-08 63.2 64 42.2
Dinv37146 Davidia involucrata HOM05D007791 ORTHO05D000653 4.3e-08 61.2 74 39.2
Ciclev10013177m.g Citrus clementina HOM05D007791 ORTHO05D000653 9.7e-08 60.1 69 43.5
ClCG07G000770 Citrullus lanatus HOM05D001004 ORTHO05D000653 1.3e-07 59.7 63 46.0
Ciclev10022906m.g Citrus clementina HOM05D001004 ORTHO05D000653 1.7e-07 59.3 78 46.2
Cc04_g14510 Coffea canephora HOM05D007791 ORTHO05D000653 1.7e-07 59.3 64 45.3
CSS0008915 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 2.2e-07 58.9 63 42.9
Glyma.11G151000 Glycine max HOM05D007791 ORTHO05D000653 2.8e-07 58.5 69 42.0
Sed0020724 Sechium edule HOM05D001004 ORTHO05D000653 3.7e-07 58.2 61 50.8
Medtr3g020800 Medicago truncatula HOM05D007791 ORTHO05D000653 4.8e-07 57.8 74 40.5
CSS0023434 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 8.2e-07 57.0 63 42.9
CSS0036268 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 8.2e-07 57.0 63 42.9
Manes.09G094800 Manihot esculenta HOM05D007791 ORTHO05D000653 8.2e-07 57.0 63 44.4
Potri.006G088700 Populus trichocarpa HOM05D007791 ORTHO05D000653 8.2e-07 57.0 69 40.6
Rhsim05G0195200 Rhododendron simsii HOM05D007791 ORTHO05D000653 8.2e-07 57.0 62 45.2
PGR031G1849 Punica granatum HOM05D007791 ORTHO05D000653 1.1e-06 56.6 69 42.0
HPP92_019238 Vanilla planifolia HOM05D007791 ORTHO05D000653 1.1e-06 56.6 64 42.2
CBR_g37573 Chara braunii HOM05D007791 ORTHO05D000653 1.4e-06 56.2 70 44.3
ClCG07G000780 Citrullus lanatus HOM05D007791 ORTHO05D044567 1.4e-06 56.2 66 47.0
Ciclev10022909m.g Citrus clementina HOM05D001004 ORTHO05D000653 1.4e-06 56.2 78 44.9
COL.COLO4_14751 Corchorus olitorius HOM05D007791 ORTHO05D000653 1.4e-06 56.2 76 39.5
CsaV3_4G025200 Cucumis sativus L. HOM05D007791 ORTHO05D000653 1.4e-06 56.2 88 37.5
Duzib106G0108 Durio zibethinus HOM05D007791 ORTHO05D000653 1.4e-06 56.2 76 38.2
Phvul.005G032000 Phaseolus vulgaris HOM05D007791 ORTHO05D000653 1.4e-06 56.2 69 42.0
Potri.006G088500 Populus trichocarpa HOM05D007791 ORTHO05D000653 1.4e-06 56.2 69 40.6
Potri.006G088616 Populus trichocarpa HOM05D007791 ORTHO05D000653 1.4e-06 56.2 69 40.6
Nitab4.5_0007505g0030 Nicotiana tabacum HOM05D007791 ORTHO05D000653 1.8e-06 55.8 64 43.8
Peaxi162Scf00013g00738 Petunia axillaris HOM05D007791 ORTHO05D000653 1.8e-06 55.8 64 46.9
DCAR_010421 Daucus carota HOM05D007791 ORTHO05D000653 3.1e-06 55.1 75 34.7
DCAR_018459 Daucus carota HOM05D000077 ORTHO05D000552 3.1e-06 55.1 71 38.0
Rhsim05G0195100 Rhododendron simsii HOM05D007791 ORTHO05D000653 3.1e-06 55.1 67 46.3
Sed0018468 Sechium edule HOM05D001004 ORTHO05D000653 3.1e-06 55.1 64 43.8
TPR.G35313 Trifolium pratense HOM05D007791 ORTHO05D000653 3.1e-06 55.1 69 39.1
Sed0001135 Sechium edule HOM05D001004 ORTHO05D000653 4.1e-06 54.7 63 41.3
SEGI_12735 Sequoiadendron giganteum HOM05D007791 ORTHO05D000653 4.1e-06 54.7 76 42.1
Duzib106G0736 Durio zibethinus HOM05D007791 ORTHO05D000653 5.3e-06 54.3 76 35.5
Medtr3g020970 Medicago truncatula HOM05D007791 ORTHO05D000653 5.3e-06 54.3 69 40.6
Nitab4.5_0002449g0040 Nicotiana tabacum HOM05D002101 ORTHO05D002126 5.3e-06 54.3 63 47.6
GSVIVG01018137001 Vitis vinifera HOM05D001004 ORTHO05D000653 5.3e-06 54.3 77 40.3
Nitab4.5_0007505g0010 Nicotiana tabacum HOM05D002101 ORTHO05D002126 6.9e-06 53.9 63 46.0
arahy.Tifrunner.gnm1.ann1.0A2T8K Arachis hypogaea HOM05D007791 ORTHO05D000653 9.1e-06 53.5 83 38.6
arahy.Tifrunner.gnm1.ann1.NKRP5F Arachis hypogaea HOM05D007791 ORTHO05D000653 9.1e-06 53.5 69 42.0
Gohir.A04G084100 Gossypium hirsutum HOM05D007791 ORTHO05D000653 9.1e-06 53.5 62 40.3
Potri.006G088664 Populus trichocarpa HOM05D007791 ORTHO05D000653 9.1e-06 53.5 69 39.1
TPR.G3886 Trifolium pratense HOM05D007791 ORTHO05D000653 9.1e-06 53.5 69 39.1
GSVIVG01018139001 Vitis vinifera HOM05D001004 ORTHO05D000653 9.1e-06 53.5 63 41.3
GSVIVG01034125001 Vitis vinifera HOM05D007791 ORTHO05D000653 9.1e-06 53.5 69 42.0


User provided reference genes

Program Settings