Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g033930 Solanum pennellii HOM05D004061 ORTHO05D004693 2.8e-131 471.9 224 100.0
Solyc10g084500.1 Solanum lycopersicum HOM05D004061 ORTHO05D004693 6.5e-128 460.7 224 96.9
PGSC0003DMG400011053 Solanum tuberosum HOM05D004061 ORTHO05D004693 1.1e-124 449.9 224 95.1
Nitab4.5_0000202g0310 Nicotiana tabacum HOM05D004061 ORTHO05D004693 1.7e-96 356.3 219 79.0
CAN.G435.5 Capsicum annuum HOM05D004061 ORTHO05D004693 2.5e-95 352.4 212 79.7
Peaxi162Scf00604g00010 Petunia axillaris HOM05D004061 ORTHO05D004693 1.0e-93 347.1 210 79.0
Nitab4.5_0000643g0160 Nicotiana tabacum HOM05D004061 ORTHO05D004693 6.6e-80 301.2 220 66.8
Nitab4.5_0006252g0020 Nicotiana tabacum HOM05D004061 ORTHO05D004693 2.5e-79 299.3 220 65.9
Sopen09g001820 Solanum pennellii HOM05D004061 ORTHO05D004693 1.4e-77 293.5 221 63.8
Solyc09g005960.4 Solanum lycopersicum HOM05D004061 ORTHO05D004693 8.9e-77 290.8 221 62.9
Peaxi162Scf00597g00310 Petunia axillaris HOM05D004061 ORTHO05D004693 2.0e-76 289.7 243 58.8
Lj3A975G70 Lonicera japonica HOM05D004061 ORTHO05D004693 4.9e-75 285.0 223 61.4
Cc06_g03260 Coffea canephora HOM05D004061 ORTHO05D004693 3.9e-72 275.4 218 60.6
Migut.L01642 Erythranthe guttata HOM05D004061 ORTHO05D004693 3.9e-72 275.4 222 60.8
Rhsim05G0184700 Rhododendron simsii HOM05D004061 ORTHO05D004693 4.3e-71 271.9 216 59.3
vmacro20095 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 7.3e-71 271.2 208 61.5
MSTRG.19117 Avicennia marina HOM05D004061 ORTHO05D004693 2.0e-68 263.1 222 58.6
Actinidia05286 Actinidia chinensis HOM05D004061 ORTHO05D004693 3.4e-68 262.3 214 57.9
Oeu035162.1 Olea europaea HOM05D004061 ORTHO05D004693 3.4e-68 262.3 202 62.9
CiPaw.09G185500 Carya illinoinensis HOM05D004061 ORTHO05D004693 2.9e-67 259.2 214 60.7
TAR633G1989 Trochodendron aralioides HOM05D004061 ORTHO05D004693 2.9e-67 259.2 214 57.0
vmacro08681 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 2.4e-66 256.1 200 62.5
Medtr7g100150 Medicago truncatula HOM05D004061 ORTHO05D004693 4.1e-66 255.4 218 56.0
CiPaw.10G139500 Carya illinoinensis HOM05D004061 ORTHO05D004693 1.6e-65 253.4 216 57.4
Lj2C103T21 Lonicera japonica HOM05D004061 ORTHO05D004693 6.0e-65 251.5 207 59.9
Ca_08806_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 7.8e-65 251.1 217 55.3
ATR0594G174 Amborella trichopoda HOM05D004061 ORTHO05D004693 2.3e-64 249.6 222 58.6
Manes.08G000500 Manihot esculenta HOM05D004061 ORTHO05D004693 3.9e-64 248.8 205 59.0
Psat0s1952g0040 Pisum sativum HOM05D004061 ORTHO05D004693 5.1e-64 248.4 217 53.9
CANSAT80G1299 Cannabis sativa HOM05D004061 ORTHO05D004693 1.1e-63 247.3 218 58.3
Ciclev10012656m.g Citrus clementina HOM05D004061 ORTHO05D004693 1.5e-63 246.9 217 55.8
TPR.G21459 Trifolium pratense HOM05D004061 ORTHO05D004693 9.5e-63 244.2 217 53.5
QL07p045968 Quercus lobata HOM05D004061 ORTHO05D004693 1.2e-62 243.8 213 56.8
ClCG04G008650 Citrullus lanatus HOM05D004061 ORTHO05D004693 2.1e-62 243.0 209 56.0
GSVIVG01025578001 Vitis vinifera HOM05D004061 ORTHO05D004693 2.1e-62 243.0 214 54.7
Glyma.03G175700 Glycine max HOM05D004061 ORTHO05D004693 2.8e-62 242.7 221 52.9
Lsat_1_v5_gn_1_54740 Lactuca sativa HOM05D004061 ORTHO05D004693 2.8e-62 242.7 228 53.5
MBI05_g22082_MAGBIO Magnolia biondii HOM05D004061 ORTHO05D004693 2.8e-62 242.7 209 57.4
HanXRQChr13g0392181 Helianthus annuus HOM05D004061 ORTHO05D004693 4.7e-62 241.9 225 52.0
Cfa017465 Carpinus fangiana HOM05D004061 ORTHO05D004693 6.2e-62 241.5 185 62.2
Potri.016G081900 Populus trichocarpa HOM05D004061 ORTHO05D004693 6.2e-62 241.5 215 55.3
Sc20g0004290 Simmondsia chinensis HOM05D004061 ORTHO05D004693 1.1e-61 240.7 214 55.6
Lj1g0024664 Lotus japonicus HOM05D004061 ORTHO05D004693 1.8e-61 240.0 218 52.8
Duzib128G0701 Durio zibethinus HOM05D004061 ORTHO05D004693 2.3e-61 239.6 215 56.3
Glyma.13G134900 Glycine max HOM05D004061 ORTHO05D004693 2.3e-61 239.6 211 52.6
Lalb_Chr25g0289361 Lupinus albus HOM05D004061 ORTHO05D004693 3.1e-61 239.2 218 51.8
Aa31LG10G9640 Aethionema arabicum HOM05D004061 ORTHO05D004693 4.0e-61 238.8 209 58.4
Nn2g10562 Nelumbo nucifera HOM05D004061 ORTHO05D004693 4.0e-61 238.8 190 58.9
Glyma.19G176300 Glycine max HOM05D004061 ORTHO05D004693 5.2e-61 238.4 217 53.0
Sed0004085 Sechium edule HOM05D004061 ORTHO05D004693 5.2e-61 238.4 214 53.3
Haze_20694 Corylus avellana HOM05D004061 ORTHO05D004693 6.8e-61 238.0 226 53.5
Nn2g12823 Nelumbo nucifera HOM05D004061 ORTHO05D004693 8.9e-61 237.7 215 53.5
unitig_8.g4322 Utricularia gibba HOM05D004061 ORTHO05D004693 8.9e-61 237.7 201 53.7
arahy.Tifrunner.gnm1.ann1.Y28VT2 Arachis hypogaea HOM05D004061 ORTHO05D004693 2.6e-60 236.1 215 53.0
C06p21460 Brassica napus HOM05D004061 ORTHO05D004693 2.6e-60 236.1 204 59.3
HanXRQChr11g0349611 Helianthus annuus HOM05D004061 ORTHO05D004693 4.4e-60 235.3 230 49.6
Sp5g08850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 4.4e-60 235.3 204 57.8
BraA07t29848Z Brassica rapa HOM05D004061 ORTHO05D004693 7.6e-60 234.6 204 58.3
Thecc.05G049300 Theobroma cacao HOM05D004061 ORTHO05D004693 9.9e-60 234.2 204 57.8
VMungo1383G1764 Vigna mungo HOM05D004061 ORTHO05D004693 1.3e-59 233.8 217 51.6
Thhalv10010698m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 1.7e-59 233.4 209 56.9
MD12G1131500 Malus domestica HOM05D004061 ORTHO05D004693 1.7e-59 233.4 224 53.1
PSO699G0012 Papaver somniferum HOM05D004061 ORTHO05D004693 2.2e-59 233.0 213 50.7
BcaC08g44627 Brassica carinata HOM05D004061 ORTHO05D004693 3.7e-59 232.3 204 58.8
TWI74G1169 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 4.9e-59 231.9 195 56.9
A07p21670 Brassica napus HOM05D004061 ORTHO05D004693 8.4e-59 231.1 204 57.8
BolC6t37328H Brassica oleracea HOM05D004061 ORTHO05D004693 8.4e-59 231.1 204 58.3
CARHR163390 Cardamine hirsuta HOM05D004061 ORTHO05D004693 1.1e-58 230.7 209 56.0
AT3G53490 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 1.4e-58 230.3 204 56.4
Duzib093G0371 Durio zibethinus HOM05D004061 ORTHO05D004693 1.4e-58 230.3 203 53.7
Glyma.10G046900 Glycine max HOM05D004061 ORTHO05D004693 2.4e-58 229.6 211 50.2
arahy.Tifrunner.gnm1.ann1.9VFE0J Arachis hypogaea HOM05D004061 ORTHO05D004693 4.1e-58 228.8 229 49.8
PSO384G5009 Papaver somniferum HOM05D004061 ORTHO05D004693 4.1e-58 228.8 211 52.1
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 5.4e-58 228.4 192 55.2
ECA248G1662 Erigeron canadensis HOM05D004061 ORTHO05D004693 7.1e-58 228.0 217 53.0
TWI77G0888 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 7.1e-58 228.0 195 54.9
AL5G34410 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 1.2e-57 227.3 204 56.4
Carub.0005s2006 Capsella rubella HOM05D004061 ORTHO05D004693 1.2e-57 227.3 204 57.4
PSO339G1720 Papaver somniferum HOM05D004061 ORTHO05D004693 1.6e-57 226.9 211 51.7
THA.LOC104806513 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 1.6e-57 226.9 211 55.0
arahy.Tifrunner.gnm1.ann1.6R95LH Arachis hypogaea HOM05D004061 ORTHO05D004693 2.1e-57 226.5 229 49.3
SGA_v2.0_scaffold35G14186 Striga asiatica HOM05D004061 ORTHO05D004693 2.7e-57 226.1 218 52.8
Phvul.007G161100 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 4.6e-57 225.3 211 49.8
Sabra16G0089600 Salix brachista HOM05D004061 ORTHO05D004693 4.6e-57 225.3 264 45.5
SalBow4G2839 Salvia bowleyana HOM05D004061 ORTHO05D004693 7.8e-57 224.6 235 48.1
unitig_578.g16044 Utricularia gibba HOM05D004061 ORTHO05D004693 7.8e-57 224.6 211 53.1
arahy.Tifrunner.gnm1.ann1.H9GTJP Arachis hypogaea HOM05D004061 ORTHO05D004693 5.1e-56 221.9 239 47.7
CDE07G0262 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 5.1e-56 221.9 198 52.5
Lalb_Chr20g0113041 Lupinus albus HOM05D004061 ORTHO05D004693 6.6e-56 221.5 225 47.1
RcHm_v2.0_Chr3g0468021 Rosa chinensis HOM05D004061 ORTHO05D004693 6.6e-56 221.5 218 52.8
Sed0004679 Sechium edule HOM05D004061 ORTHO05D004693 6.6e-56 221.5 215 49.8
Aqoxy4G03101 Aquilegia oxysepala HOM05D004061 ORTHO05D004693 1.1e-55 220.7 213 50.7
FvH4_6g14800 Fragaria vesca HOM05D004061 ORTHO05D004693 3.3e-55 219.2 212 53.8
FAN14G1560 Fragaria x ananassa HOM05D004061 ORTHO05D004693 3.3e-55 219.2 212 53.8
Lj5g0017469 Lotus japonicus HOM05D004061 ORTHO05D004693 7.3e-55 218.0 211 47.9
FAN05G3362 Fragaria x ananassa HOM05D004061 ORTHO05D004693 9.6e-55 217.6 212 53.3
MD04G1110000 Malus domestica HOM05D004061 ORTHO05D004693 2.1e-54 216.5 220 50.9
Dinv35674 Davidia involucrata HOM05D004061 ORTHO05D004693 1.8e-53 213.4 178 57.3
HPP92_015408 Vanilla planifolia HOM05D004061 ORTHO05D004693 1.8e-53 213.4 214 48.1
MELO3C003083.2 Cucumis melo HOM05D004061 ORTHO05D004693 2.4e-53 213.0 216 50.5
FAN02G3315 Fragaria x ananassa HOM05D004061 ORTHO05D004693 3.1e-53 212.6 212 53.3
Phvul.001G172800 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 5.2e-53 211.8 217 48.4
PGR004G1528 Punica granatum HOM05D004061 ORTHO05D004693 8.9e-53 211.1 207 49.8
HPP92_006587 Vanilla planifolia HOM05D004061 ORTHO05D004693 1.2e-52 210.7 214 48.6
AUR62044395 Chenopodium quinoa HOM05D004061 ORTHO05D004693 1.5e-52 210.3 208 50.5
CsaV3_4G024510 Cucumis sativus L. HOM05D004061 ORTHO05D004693 3.4e-52 209.1 207 50.7
Gohir.A01G218200 Gossypium hirsutum HOM05D004061 ORTHO05D004693 4.4e-52 208.8 204 49.0
Hund12072 Selenicereus undatus HOM05D004061 ORTHO05D004693 5.8e-52 208.4 217 52.5
Atru.chr8.2505 Acer truncatum HOM05D004061 ORTHO05D004693 7.6e-52 208.0 215 51.6
Cpa.g.sc114.23 Carica papaya HOM05D004061 ORTHO05D004693 9.9e-52 207.6 207 51.7
Medtr1g067320 Medicago truncatula HOM05D004061 ORTHO05D004693 1.7e-51 206.8 215 44.7
Os03g0282800 Oryza sativa ssp. japonica HOM05D004061 ORTHO05D004693 2.9e-51 206.1 217 49.8
Dinv35675 Davidia involucrata HOM05D004061 ORTHO05D004693 3.8e-51 205.7 154 62.3
Gorai.001G248900 Gossypium raimondii HOM05D004061 ORTHO05D004693 3.8e-51 205.7 206 50.5
EL10Ac7g17278 Beta vulgaris HOM05D004061 ORTHO05D004693 6.4e-51 204.9 211 51.2
Aa31LG10G9670 Aethionema arabicum HOM05D004061 ORTHO05D004693 1.1e-50 204.1 186 57.0
TPR.G7552 Trifolium pratense HOM05D004061 ORTHO05D004693 1.1e-50 204.1 193 48.2
Prupe.6G245800 Prunus persica HOM05D004061 ORTHO05D004693 1.4e-50 203.8 214 49.5
SHI12648 Sapria himalayana HOM05D004061 ORTHO05D004693 1.9e-50 203.4 202 49.0
Gohir.D13G097300 Gossypium hirsutum HOM05D004061 ORTHO05D004693 5.4e-50 201.8 206 50.0
Gohir.A13G095435 Gossypium hirsutum HOM05D004061 ORTHO05D004693 2.7e-49 199.5 204 50.5
Sp6g39850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 3.5e-49 199.1 219 47.9
Gohir.D01G207100 Gossypium hirsutum HOM05D004061 ORTHO05D004693 4.6e-49 198.7 232 44.8
Ca_11436_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 3.9e-48 195.7 217 43.3
Carub.0006s0148 Capsella rubella HOM05D004061 ORTHO05D004693 6.6e-48 194.9 216 46.3
Gorai.002G252200 Gossypium raimondii HOM05D004061 ORTHO05D004693 1.1e-47 194.1 232 44.0
AT5G02720 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 1.5e-47 193.7 215 44.7
VMungo0720G0415 Vigna mungo HOM05D004061 ORTHO05D004693 1.9e-47 193.4 259 38.6
Pp3c2_4500 Physcomitrium patens HOM05D004061 ORTHO05D004693 3.3e-47 192.6 196 49.5
Oeu049603.1 Olea europaea HOM05D004061 ORTHO05D004693 4.3e-47 192.2 135 67.4
Lalb_Chr01g0019101 Lupinus albus HOM05D004061 ORTHO05D004693 5.6e-47 191.8 223 44.4
A10p32990 Brassica napus HOM05D004061 ORTHO05D004693 1.6e-46 190.3 217 44.7
Psat6g069360 Pisum sativum HOM05D004061 ORTHO05D004693 4.8e-46 188.7 191 44.5
Dinv37231 Davidia involucrata HOM05D004061 ORTHO05D004693 6.2e-46 188.3 147 61.2
BolC4t25479H Brassica oleracea HOM05D004061 ORTHO05D004693 8.1e-46 188.0 205 48.8
BraA10t45336Z Brassica rapa HOM05D004061 ORTHO05D004693 1.4e-45 187.2 205 45.9
BcaNung03280 Brassica carinata HOM05D004061 ORTHO05D004693 1.8e-45 186.8 208 47.1
C04p39050 Brassica napus HOM05D004061 ORTHO05D004693 3.1e-45 186.0 205 48.8
BolC9t60131H Brassica oleracea HOM05D004061 ORTHO05D004693 9.0e-45 184.5 208 46.6
BcaC02g09159 Brassica carinata HOM05D004061 ORTHO05D004693 1.3e-43 180.6 204 47.1
BraA04t16312Z Brassica rapa HOM05D004061 ORTHO05D004693 8.4e-43 177.9 204 46.6
HPP92_026988 Vanilla planifolia HOM05D004061 ORTHO05D004693 8.4e-43 177.9 190 45.3
SMO164G0167 Selaginella moellendorffii HOM05D004061 ORTHO05D004693 2.4e-42 176.4 194 45.4
THA.LOC104816298 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 4.2e-42 175.6 201 46.3
A04p06100 Brassica napus HOM05D004061 ORTHO05D004693 7.1e-42 174.9 204 46.1
Pp3c17_20730 Physcomitrium patens HOM05D004061 ORTHO05D004693 1.7e-40 170.2 219 42.9
Pp3c17_20731 Physcomitrium patens HOM05D004061 ORTHO05D004693 1.7e-40 170.2 219 42.9
Ah.08g212360 Amaranthus hybridus HOM05D004061 ORTHO05D004693 2.5e-39 166.4 192 47.4
AagrBONN_evm.TU.Sc2ySwM_117.2779 Anthoceros agrestis HOM05D004061 ORTHO05D004693 6.2e-38 161.8 220 39.5
PSO675G5312 Papaver somniferum HOM05D004061 ORTHO05D004693 2.4e-37 159.8 201 46.3
Mapoly0179s0007 Marchantia polymorpha HOM05D004061 ORTHO05D004693 4.0e-37 159.1 247 36.8
BcaB02g08525 Brassica carinata HOM05D004061 ORTHO05D004693 2.1e-33 146.7 159 49.1
Aqoxy4G03086 Aquilegia oxysepala HOM05D003496 ORTHO05D003909 3.5e-33 146.0 187 41.2
ATR0594G139 Amborella trichopoda HOM05D004061 ORTHO05D004693 1.0e-32 144.4 172 45.9
AUR62042140 Chenopodium quinoa HOM05D004061 ORTHO05D004693 4.3e-31 139.0 136 50.0
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 4.3e-31 139.0 141 48.9
BcaC06g32007 Brassica carinata HOM05D004061 ORTHO05D004693 1.1e-29 134.4 206 39.8
C09p73960 Brassica napus HOM05D004061 ORTHO05D004693 3.1e-29 132.9 205 38.5
COL.COLO4_10313 Corchorus olitorius HOM05D004061 ORTHO05D004693 2.0e-28 130.2 138 47.1
Thhalv10016063m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 3.9e-24 115.9 142 42.3
AL6G11960 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 3.7e-22 109.4 142 39.4
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 1.1e-21 107.8 142 43.0
ATR0594G136 Amborella trichopoda HOM05D004061 ORTHO05D004693 3.8e-19 99.4 149 38.9
BcaB02g07781 Brassica carinata HOM05D004061 ORTHO05D004693 1.8e-16 90.5 71 57.7
CARHR210670 Cardamine hirsuta HOM05D004061 ORTHO05D004693 1.6e-14 84.0 61 59.0
Zm00001eb397300 Zea mays HOM05D004061 ORTHO05D004693 1.1e-13 81.3 108 42.6
Zm00001eb012900 Zea mays HOM05D004061 ORTHO05D004693 1.4e-13 80.9 73 54.8
vmacro08682 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 9.0e-13 78.2 67 55.2
BolC3t12673H Brassica oleracea HOM05D004061 ORTHO05D004693 5.5e-10 68.9 110 36.4
AUR62041005 Chenopodium quinoa HOM05D004061 ORTHO05D004693 2.7e-09 66.6 51 58.8
C03p01140 Brassica napus HOM05D004061 ORTHO05D004693 3.9e-08 62.8 110 34.5
HPP92_026989 Vanilla planifolia HOM05D004061 ORTHO05D004693 7.4e-07 58.5 56 46.4
ClCG08G000420 Citrullus lanatus HOM05D004289 ORTHO05D005141 3.7e-06 56.2 77 37.7
TWI23G1156 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 4.8e-06 55.8 74 39.2


User provided reference genes

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