Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g033180 Solanum pennellii HOM05D001312 ORTHO05D008018 2.7e-103 378.6 188 100.0
Solyc10g083710.2 Solanum lycopersicum HOM05D001312 ORTHO05D008018 1.4e-99 366.3 188 96.3
PGSC0003DMG400028176 Solanum tuberosum HOM05D001312 ORTHO05D008018 2.9e-97 358.6 188 93.6
Nitab4.5_0000132g0320 Nicotiana tabacum HOM05D001312 ORTHO05D008018 1.4e-83 313.2 181 86.2
Nitab4.5_0004490g0050 Nicotiana tabacum HOM05D001312 ORTHO05D008018 1.8e-83 312.8 184 84.8
Peaxi162Scf00110g01214 Petunia axillaris HOM05D001312 ORTHO05D008018 9.7e-77 290.4 191 78.5
CSS0027895 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 1.3e-68 263.5 183 71.0
CSS0009438 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 6.3e-68 261.2 183 70.5
Haze_19515 Corylus avellana HOM05D001312 ORTHO05D008018 1.1e-64 250.4 182 69.2
vmacro07336 Vaccinium macrocarpon HOM05D001312 ORTHO05D008018 7.2e-64 247.7 183 66.7
Potri.016G095900 Populus trichocarpa HOM05D001312 ORTHO05D008018 9.5e-64 247.3 182 67.6
Thecc.05G079000 Theobroma cacao HOM05D001312 ORTHO05D008018 2.8e-63 245.7 179 66.5
Prupe.7G120300 Prunus persica HOM05D001312 ORTHO05D008018 8.0e-63 244.2 183 66.1
RcHm_v2.0_Chr3g0471781 Rosa chinensis HOM05D001312 ORTHO05D008018 8.0e-63 244.2 189 66.7
Cc06_g05050 Coffea canephora HOM05D001312 ORTHO05D008018 1.8e-62 243.0 176 67.6
Gorai.009G409200 Gossypium raimondii HOM05D001312 ORTHO05D008018 1.2e-61 240.4 179 63.7
Gohir.D04G105500 Gossypium hirsutum HOM05D001312 ORTHO05D008018 2.6e-61 239.2 179 63.7
FAN09G2766 Fragaria x ananassa HOM05D001312 ORTHO05D008018 3.4e-61 238.8 186 65.6
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 3.4e-61 238.8 179 65.9
FAN05G3053 Fragaria x ananassa HOM05D001312 ORTHO05D008018 4.4e-61 238.4 186 65.6
FvH4_6g17520 Fragaria vesca HOM05D001312 ORTHO05D008018 5.7e-61 238.0 186 66.1
FAN14G3191 Fragaria x ananassa HOM05D001312 ORTHO05D008018 5.7e-61 238.0 186 66.1
FAN05G0775 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.3e-60 236.9 186 65.1
Hma1.2p1_0651F.1_g195720 Hydrangea macrophylla HOM05D001312 ORTHO05D008018 2.2e-60 236.1 162 71.6
CiPaw.10G004200 Carya illinoinensis HOM05D001312 ORTHO05D008018 2.8e-60 235.7 182 63.2
Migut.J00495 Erythranthe guttata HOM05D001312 ORTHO05D008018 3.7e-60 235.3 176 64.2
MSTRG.5801 Avicennia marina HOM05D001312 ORTHO05D008018 6.3e-60 234.6 185 63.2
TWI53G1380 Tripterygium wilfordii HOM05D001312 ORTHO05D008018 1.1e-59 233.8 183 63.4
CiPaw.09G007400 Carya illinoinensis HOM05D001312 ORTHO05D008018 1.4e-59 233.4 183 66.7
Actinidia39872 Actinidia chinensis HOM05D001312 ORTHO05D008018 1.8e-59 233.0 186 64.0
Eucgr.A01566 Eucalyptus grandis HOM05D001312 ORTHO05D008018 2.4e-59 232.6 182 62.1
COL.COLO4_22294 Corchorus olitorius HOM05D001312 ORTHO05D008018 3.1e-59 232.3 183 62.8
MD14G1093900 Malus domestica HOM05D001312 ORTHO05D008018 2.0e-58 229.6 183 63.4
Cpa.g.sc5.99 Carica papaya HOM05D001312 ORTHO05D008018 2.7e-58 229.2 186 64.0
ECA248G1880 Erigeron canadensis HOM05D001312 ORTHO05D008018 2.7e-58 229.2 182 64.3
Oeu039841.2 Olea europaea HOM05D001312 ORTHO05D008018 2.7e-58 229.2 214 56.5
Sabra16G0101200 Salix brachista HOM05D001312 ORTHO05D008018 4.5e-58 228.4 221 56.1
Lj5g0006635 Lotus japonicus HOM05D001312 ORTHO05D008018 7.8e-58 227.6 178 63.5
Lj3A1005G38 Lonicera japonica HOM05D001312 ORTHO05D008018 1.7e-57 226.5 234 54.7
Glyma.10G065300 Glycine max HOM05D001312 ORTHO05D008018 2.9e-57 225.7 178 63.5
HanXRQChr01g0028401 Helianthus annuus HOM05D001312 ORTHO05D008018 2.9e-57 225.7 179 63.1
Medtr1g061560 Medicago truncatula HOM05D001312 ORTHO05D008018 5.0e-57 224.9 185 60.0
arahy.Tifrunner.gnm1.ann1.42C0B0 Arachis hypogaea HOM05D001312 ORTHO05D008018 1.5e-56 223.4 178 64.0
arahy.Tifrunner.gnm1.ann1.C1UQYX Arachis hypogaea HOM05D001312 ORTHO05D008018 1.5e-56 223.4 178 64.0
CANSAT80G2114 Cannabis sativa HOM05D001312 ORTHO05D008018 1.5e-56 223.4 183 62.3
Sed0012062 Sechium edule HOM05D001312 ORTHO05D008018 3.3e-56 222.2 181 61.9
TPR.G5684 Trifolium pratense HOM05D001312 ORTHO05D008018 3.3e-56 222.2 178 60.7
Phvul.007G224100 Phaseolus vulgaris HOM05D001312 ORTHO05D008018 4.3e-56 221.9 178 62.4
Lsat_1_v5_gn_1_50640 Lactuca sativa HOM05D001312 ORTHO05D008018 9.5e-56 220.7 179 62.0
SalBow3G2703 Salvia bowleyana HOM05D001312 ORTHO05D008018 1.6e-55 219.9 181 59.1
VMungo0720G0477 Vigna mungo HOM05D001312 ORTHO05D008018 1.6e-55 219.9 178 62.4
Rhsim03G0083100 Rhododendron simsii HOM05D001312 ORTHO05D008018 2.8e-55 219.2 173 63.6
PSO339G3022 Papaver somniferum HOM05D001312 ORTHO05D008018 1.0e-54 217.2 181 59.1
Aqoxy1G00967 Aquilegia oxysepala HOM05D001312 ORTHO05D008018 4.0e-54 215.3 184 61.4
BcaC06g32083 Brassica carinata HOM05D001312 ORTHO05D008018 8.9e-54 214.2 180 60.0
DCAR_015029 Daucus carota HOM05D001312 ORTHO05D008018 2.6e-53 212.6 165 64.2
FAN02G1263 Fragaria x ananassa HOM05D001312 ORTHO05D008018 3.4e-53 212.2 186 61.8
Thhalv10013569m.g Eutrema salsugineum HOM05D001312 ORTHO05D008018 4.4e-53 211.8 180 60.6
CsaV3_6G040350 Cucumis sativus L. HOM05D001312 ORTHO05D008018 7.5e-53 211.1 181 58.0
Psat6g076240 Pisum sativum HOM05D001312 ORTHO05D008018 7.5e-53 211.1 157 66.9
ClCG04G009690 Citrullus lanatus HOM05D001312 ORTHO05D008018 6.4e-52 208.0 182 58.2
AT5G03770 Arabidopsis thaliana HOM05D001312 ORTHO05D008018 8.3e-52 207.6 180 58.3
Sp6g38960 Schrenkiella parvula HOM05D001312 ORTHO05D008018 1.1e-51 207.2 180 58.9
SGA_v2.0_scaffold40G15429 Striga asiatica HOM05D001312 ORTHO05D008018 1.4e-51 206.8 173 60.7
PSO063G2793 Papaver somniferum HOM05D001312 ORTHO05D008018 1.8e-51 206.5 211 51.2
C09p73160 Brassica napus HOM05D001312 ORTHO05D008018 2.4e-51 206.1 180 58.9
QL07p040881 Quercus lobata HOM05D001312 ORTHO05D008018 2.4e-51 206.1 255 47.5
EL10Ac7g16768 Beta vulgaris HOM05D001312 ORTHO05D008018 3.2e-51 205.7 178 58.4
A10p32330 Brassica napus HOM05D001312 ORTHO05D008018 3.2e-51 205.7 180 58.9
BraA10t45274Z Brassica rapa HOM05D001312 ORTHO05D008018 3.2e-51 205.7 180 58.9
AL6G13310 Arabidopsis lyrata HOM05D001312 ORTHO05D008018 4.1e-51 205.3 180 57.8
Aa31LG1G21490 Aethionema arabicum HOM05D001312 ORTHO05D008018 7.0e-51 204.5 178 57.3
Ca_11617_v3 Cicer arietinum L. HOM05D001312 ORTHO05D008018 9.2e-51 204.1 158 63.9
Carub.0006s0268 Capsella rubella HOM05D001312 ORTHO05D008018 2.7e-50 202.6 180 57.2
BolC9t60051H Brassica oleracea HOM05D001312 ORTHO05D008018 4.6e-50 201.8 180 58.3
Hund20444 Selenicereus undatus HOM05D001312 ORTHO05D008018 7.8e-50 201.1 182 59.9
unitig_744.g24689 Utricularia gibba HOM05D001312 ORTHO05D008018 8.6e-49 197.6 171 57.3
SEGI_32755 Sequoiadendron giganteum HOM05D001312 ORTHO05D008018 1.5e-48 196.8 188 52.1
GSVIVG01033751001 Vitis vinifera HOM05D001312 ORTHO05D008018 4.3e-48 195.3 126 72.2
Sc02g0001220 Simmondsia chinensis HOM05D001312 ORTHO05D008018 7.3e-48 194.5 128 70.3
ATR0820G168 Amborella trichopoda HOM05D001312 ORTHO05D008018 1.2e-47 193.7 181 55.2
Gohir.A04G066728 Gossypium hirsutum HOM05D001312 ORTHO05D008018 1.2e-47 193.7 126 70.6
MBI01_g48091_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 1.1e-46 190.7 150 62.0
MELO3C024510.2 Cucumis melo HOM05D001312 ORTHO05D008018 6.8e-46 188.0 128 65.6
Lalb_Chr21g0315421 Lupinus albus HOM05D001312 ORTHO05D008018 6.8e-46 188.0 160 61.2
THA.LOC104816378 Tarenaya hassleriana HOM05D001312 ORTHO05D008018 2.6e-45 186.0 178 53.4
Manes.08G018900 Manihot esculenta HOM05D001312 ORTHO05D008018 5.8e-45 184.9 126 69.0
Zm00001eb147410 Zea mays HOM05D001312 ORTHO05D008018 1.9e-43 179.9 169 52.1
Ciclev10013092m.g Citrus clementina HOM05D001312 ORTHO05D008018 4.1e-43 178.7 132 71.2
Dinv35859 Davidia involucrata HOM05D001312 ORTHO05D008018 4.1e-43 178.7 103 83.5
Nn6g35083 Nelumbo nucifera HOM05D001312 ORTHO05D008018 1.0e-41 174.1 146 60.3
Atru.BG.216.p Acer truncatum HOM05D001312 ORTHO05D008018 2.3e-41 172.9 178 55.6
Glyma.13G150200 Glycine max HOM05D001312 ORTHO05D008018 5.0e-41 171.8 141 61.0
Ah.15g091190 Amaranthus hybridus HOM05D001312 ORTHO05D008018 2.8e-39 166.0 133 60.2
SMO364G0357 Selaginella moellendorffii HOM05D001312 ORTHO05D008018 1.4e-38 163.7 175 46.9
AagrBONN_evm.TU.Sc2ySwM_344.3661 Anthoceros agrestis HOM05D001312 ORTHO05D008018 5.2e-38 161.8 173 45.7
Pp3c21_8090 Physcomitrium patens HOM05D001312 ORTHO05D008018 1.1e-35 154.1 181 41.4
AUR62037894 Chenopodium quinoa HOM05D001312 ORTHO05D008018 7.3e-32 141.4 133 54.9
Mapoly0002s0209 Marchantia polymorpha HOM05D001312 ORTHO05D008018 2.1e-31 139.8 183 41.0
AUR62033601 Chenopodium quinoa HOM05D001312 ORTHO05D008018 1.5e-29 133.7 118 59.3
CARHR208860 Cardamine hirsuta HOM05D001312 ORTHO05D008018 3.8e-28 129.0 97 64.9
CBR_g874 Chara braunii HOM05D001312 ORTHO05D008018 3.3e-24 115.9 109 51.4
Atru.chr8.1664 Acer truncatum HOM05D001312 ORTHO05D008018 7.8e-18 94.7 63 68.3
HPP92_006796 Vanilla planifolia HOM05D001312 ORTHO05D008018 9.6e-16 87.8 80 53.8


User provided reference genes

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