Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g031510 Solanum pennellii HOM05D011074 ORTHO05D012130 5.5e-75 284.3 148 100.0
Solyc10g081000.1 Solanum lycopersicum HOM05D011074 ORTHO05D012130 7.4e-72 273.9 151 96.0
PGSC0003DMG400028103 Solanum tuberosum HOM05D011074 ORTHO05D012130 1.1e-64 250.0 155 87.1
Nitab4.5_0001314g0020 Nicotiana tabacum HOM05D011074 ORTHO05D012130 4.5e-45 184.9 151 71.5
Nitab4.5_0000062g0200 Nicotiana tabacum HOM05D011074 ORTHO05D012130 3.3e-43 178.7 156 68.6
Peaxi162Scf00601g00022 Petunia axillaris HOM05D011074 ORTHO05D012130 1.4e-22 110.2 148 51.4
CsaV3_4G029260 Cucumis sativus L. HOM05D011074 ORTHO05D012130 6.0e-13 78.2 108 45.4
ClCG04G005870 Citrullus lanatus HOM05D011074 ORTHO05D012130 8.6e-12 74.3 125 42.4
Dinv03164 Davidia involucrata HOM05D011074 ORTHO05D012130 8.6e-12 74.3 131 45.0
Cc02_g33500 Coffea canephora HOM05D011074 ORTHO05D012130 3.6e-10 68.9 112 45.5
Sed0022691 Sechium edule HOM05D011074 ORTHO05D012130 6.2e-10 68.2 150 38.7
TAR623G0333 Trochodendron aralioides HOM05D011074 ORTHO05D012130 4.0e-09 65.5 116 42.2
Peaxi162Scf00272g00010 Petunia axillaris HOM05D011074 ORTHO05D012130 2.6e-08 62.8 74 52.7
QL07p013687 Quercus lobata HOM05D011074 ORTHO05D012130 2.6e-08 62.8 150 41.3
CiPaw.09G051700 Carya illinoinensis HOM05D011074 ORTHO05D012130 1.3e-07 60.5 150 37.3
Atru.chr1.1365 Acer truncatum HOM05D011074 ORTHO05D012130 2.9e-07 59.3 93 44.1
Potri.016G028800 Populus trichocarpa HOM05D020855 ORTHO05D012130 6.4e-07 58.2 149 39.6
CSS0004109 Camellia sinensis var. sinensis HOM05D011074 ORTHO05D012130 1.1e-06 57.4 157 33.1
Manes.08G162000 Manihot esculenta HOM05D020855 ORTHO05D012130 1.4e-06 57.0 106 44.3
Potri.006G031500 Populus trichocarpa HOM05D020855 ORTHO05D012130 4.2e-06 55.5 103 40.8


User provided reference genes

Program Settings