Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 1.0e-165 586.6 289 100.0
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 1.3e-160 569.7 289 97.6
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 4.7e-147 524.6 266 98.5
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 4.4e-129 464.9 275 85.5
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.9e-127 459.5 270 86.7
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 2.7e-118 429.1 270 81.1
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.5e-100 370.2 256 73.8
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 2.0e-97 359.8 244 74.6
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 3.4e-97 359.0 266 68.4
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 5.8e-97 358.2 246 73.6
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.0e-96 357.5 265 69.4
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.3e-96 357.1 264 68.9
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 2.2e-96 356.3 264 69.7
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 2.9e-96 355.9 244 73.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 2.9e-96 355.9 199 84.4
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 8.4e-96 354.4 197 85.8
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 1.9e-95 353.2 264 67.8
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.9e-95 353.2 194 87.1
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.5e-95 352.8 234 76.1
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 2.5e-95 352.8 200 84.0
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 2.5e-95 352.8 197 85.3
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 2.5e-95 352.8 265 67.9
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 2.5e-95 352.8 264 69.3
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 5.5e-95 351.7 265 66.8
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 5.5e-95 351.7 199 83.9
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 5.5e-95 351.7 195 85.6
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 7.1e-95 351.3 214 79.9
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 1.2e-94 350.5 265 69.4
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 1.2e-94 350.5 265 69.4
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 2.7e-94 349.4 266 69.2
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 3.5e-94 349.0 198 84.8
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 3.5e-94 349.0 267 69.7
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 4.6e-94 348.6 268 67.2
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 6.0e-94 348.2 243 72.0
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.0e-93 347.4 266 66.2
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 1.0e-93 347.4 264 67.8
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 1.3e-93 347.1 268 67.5
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.8e-93 346.7 264 67.8
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 1.8e-93 346.7 275 65.5
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.3e-93 346.3 266 66.2
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 3.0e-93 345.9 248 71.0
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.9e-93 345.5 280 67.1
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.5e-92 343.6 247 70.0
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.5e-92 343.6 196 82.1
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.9e-92 343.2 258 68.2
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 1.6e-91 340.1 266 67.3
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 2.8e-91 339.3 266 67.3
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 2.8e-91 339.3 197 80.2
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 3.7e-91 339.0 201 81.1
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 3.7e-91 339.0 268 64.9
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.7e-91 339.0 265 66.0
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 4.8e-91 338.6 263 66.2
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 6.3e-91 338.2 268 66.4
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.1e-90 337.4 194 82.0
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 2.4e-90 336.3 198 80.3
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.1e-90 335.9 265 68.7
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 4.1e-90 335.5 270 64.8
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 4.1e-90 335.5 198 79.8
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 5.3e-90 335.1 263 65.4
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.5e-89 333.6 268 65.3
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 2.0e-89 333.2 269 64.7
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.4e-89 332.4 248 68.5
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 4.5e-89 332.0 255 67.1
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 2.9e-88 329.3 197 78.7
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 2.9e-88 329.3 212 75.0
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 3.8e-88 328.9 198 79.8
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 3.8e-88 328.9 273 64.1
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 6.5e-88 328.2 267 65.2
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.9e-87 326.6 198 78.8
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.9e-87 326.6 198 78.8
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.9e-87 326.6 271 63.8
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.9e-87 326.6 264 64.0
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 2.5e-87 326.2 240 70.0
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 1.6e-86 323.6 204 77.0
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 2.1e-86 323.2 225 69.3
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 1.8e-85 320.1 282 62.4
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 2.0e-84 316.6 242 66.1
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 7.4e-84 314.7 197 75.1
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 2.8e-83 312.8 195 73.3
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 2.4e-82 309.7 194 76.3
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 3.4e-81 305.8 194 73.7
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.0e-80 304.3 193 73.1
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 5.0e-80 302.0 256 58.2
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 5.0e-80 302.0 271 60.5
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 1.4e-79 300.4 271 60.1
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 4.2e-79 298.9 277 60.3
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 7.9e-78 294.7 245 62.9
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.4e-77 293.9 178 78.7
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 5.7e-76 288.5 166 80.7
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 7.4e-76 288.1 361 49.6
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 1.1e-74 284.3 259 56.8
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 1.3e-72 277.3 166 77.7
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 5.0e-72 275.4 286 58.4
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-70 270.8 235 59.1
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.9e-69 265.8 161 77.0
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 2.0e-65 253.4 197 67.5
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 3.0e-61 239.6 215 60.0
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.1e-54 216.9 196 60.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 6.1e-54 215.3 120 84.2
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 1.8e-53 213.8 164 67.7
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 4.0e-53 212.6 224 54.9
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 9.1e-50 201.4 121 77.7
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 2.8e-46 189.9 116 80.2
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 2.3e-45 186.8 264 45.5
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 4.0e-45 186.0 227 49.3
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.2e-44 184.5 96 89.6
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 2.8e-43 179.9 101 84.2
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.5e-41 172.9 170 57.1
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 1.2e-36 157.9 487 29.8
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 2.6e-36 156.8 216 45.4
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.7e-30 136.0 91 69.2
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 3.4e-28 129.8 72 80.6
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 1.4e-26 124.4 68 80.9
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.6e-17 92.8 96 53.1
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-10 69.7 45 75.6


User provided reference genes

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