Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 4.3e-97 358.2 211 100.0
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 8.1e-72 274.2 156 98.1
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 5.3e-71 271.6 162 93.8
Nitab4.5_0001509g0010 Nicotiana tabacum HOM05D015445 ORTHO05D025892 1.3e-29 134.0 150 61.3
Nitab4.5_0004587g0040 Nicotiana tabacum HOM05D015445 ORTHO05D025892 1.3e-29 134.0 150 61.3
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 1.3e-29 134.0 178 51.1
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 1.1e-28 131.0 177 49.7
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 1.0e-26 124.4 171 48.0
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 3.0e-26 122.9 176 50.6
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 7.7e-22 108.2 182 46.2
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 1.0e-21 107.8 182 44.5
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 1.1e-20 104.4 184 43.5
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.5e-20 104.0 188 43.6
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 4.2e-20 102.4 154 44.8
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 5.5e-20 102.1 189 40.7
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 3.6e-19 99.4 183 41.5
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 6.1e-19 98.6 173 39.9
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 8.0e-19 98.2 187 41.7
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 1.0e-18 97.8 187 39.0
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 2.3e-18 96.7 180 39.4
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 3.0e-18 96.3 187 39.0
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 6.7e-18 95.1 205 42.4
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 2.6e-17 93.2 187 40.1
PGSC0003DMG400023723 Solanum tuberosum HOM05D015445 ORTHO05D025892 7.5e-17 91.7 81 66.7
Peaxi162Scf00354g00210 Petunia axillaris HOM05D015445 ORTHO05D008750 9.7e-17 91.3 144 47.2
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 1.7e-16 90.5 166 39.8
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 1.7e-16 90.5 168 39.9
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 2.2e-16 90.1 189 41.3
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 2.8e-16 89.7 190 39.5
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 2.8e-16 89.7 150 42.7
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 4.8e-16 89.0 181 38.7
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 4.8e-16 89.0 154 41.6
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 6.3e-16 88.6 188 37.8
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 6.3e-16 88.6 187 38.0
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 6.3e-16 88.6 165 40.6
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 1.4e-15 87.4 194 38.1
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.4e-15 86.7 152 42.8
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.4e-15 86.7 63 71.4
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.4e-15 86.7 63 71.4
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 2.4e-15 86.7 189 38.1
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 3.1e-15 86.3 162 40.1
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 5.3e-15 85.5 192 39.1
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 1.2e-14 84.3 154 42.2
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 1.2e-14 84.3 117 47.9
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 1.2e-14 84.3 154 39.6
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 2.0e-14 83.6 181 38.1
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 2.6e-14 83.2 120 47.5
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 3.5e-14 82.8 68 63.2
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 4.5e-14 82.4 168 39.9
Sopen10g030780 Solanum pennellii HOM05D015445 ORTHO05D025892 4.5e-14 82.4 70 67.1
Solyc10g080170.1 Solanum lycopersicum HOM05D015445 ORTHO05D025892 7.7e-14 81.6 92 58.7
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.7e-13 80.5 63 63.5
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 2.2e-13 80.1 63 61.9
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 5.0e-13 79.0 158 36.7
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 6.5e-13 78.6 189 38.6
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 6.5e-13 78.6 165 41.2
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 8.5e-13 78.2 195 34.9
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 1.1e-12 77.8 188 37.2
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 1.5e-12 77.4 168 38.7
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 3.2e-12 76.3 187 36.9
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 5.5e-12 75.5 125 42.4
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 7.2e-12 75.1 125 40.8
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 9.4e-12 74.7 161 36.6
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 9.4e-12 74.7 132 43.2
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 9.4e-12 74.7 169 40.2
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 2.1e-11 73.6 160 38.8
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 3.6e-11 72.8 151 37.7
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 6.1e-11 72.0 139 43.2
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 8.0e-11 71.6 161 38.5
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.8e-10 70.5 160 33.1
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 2.3e-10 70.1 183 35.5
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 4.0e-10 69.3 150 35.3
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 5.2e-10 68.9 161 35.4
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 5.2e-10 68.9 169 37.3
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 6.8e-10 68.6 60 58.3
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 6.8e-10 68.6 172 37.8
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 6.8e-10 68.6 162 37.0
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 1.2e-09 67.8 112 41.1
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.2e-09 67.8 151 35.8
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 2.0e-09 67.0 160 37.5
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 2.0e-09 67.0 162 37.7
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 2.6e-09 66.6 147 39.5
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 4.4e-09 65.9 164 39.0
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 7.5e-09 65.1 161 40.4
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 7.5e-09 65.1 109 38.5
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 9.8e-09 64.7 158 31.0
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 1.7e-08 63.9 150 38.0
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.7e-08 63.9 101 40.6
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.7e-08 63.9 101 40.6
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 2.8e-08 63.2 158 30.4
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 3.7e-08 62.8 138 37.7
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 6.3e-08 62.0 162 29.0
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 6.3e-08 62.0 162 29.0
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 8.3e-08 61.6 159 40.9
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.4e-07 60.8 80 42.5
AagrBONN_evm.TU.Sc2ySwM_228.5650 Anthoceros agrestis HOM05D017655 ORTHO05D008750 4.1e-07 59.3 113 38.1
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 4.1e-07 59.3 43 60.5
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.6e-06 57.4 161 34.8
Cre11.g467641 Chlamydomonas reinhardtii HOM05D017655 ORTHO05D008750 2.0e-06 57.0 52 48.1
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 2.0e-06 57.0 133 38.3
Pp3c1_16980 Physcomitrium patens HOM05D017655 ORTHO05D008750 3.5e-06 56.2 86 39.5


User provided reference genes

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