Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g030520 Solanum pennellii HOM05D029882 ORTHO05D037717 3.8e-153 545.8 555 100.0
PGSC0003DMG400029827 Solanum tuberosum HOM05D029882 ORTHO05D037717 2.4e-83 313.9 514 43.6
Solyc10g079900.3 Solanum lycopersicum HOM05D029882 ORTHO05D037717 1.2e-82 311.6 169 95.3
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 2.6e-29 134.4 173 49.1
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 2.3e-17 94.7 140 42.1
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 4.4e-16 90.5 138 42.8
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 4.8e-15 87.0 136 44.1
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 1.8e-14 85.1 168 34.5
PGSC0003DMG400012697 Solanum tuberosum HOM05D017238 ORTHO05D009536 1.6e-13 82.0 136 39.7
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 2.0e-13 81.6 136 39.0
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 5.9e-13 80.1 136 39.0
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 8.0e-10 69.7 110 38.2
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 3.0e-09 67.8 80 46.2
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 2.6e-08 64.7 77 44.2
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 3.7e-07 60.8 82 41.5
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 4.8e-07 60.5 83 42.2
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 4.8e-07 60.5 75 40.0
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 4.8e-07 60.5 75 40.0
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 8.3e-07 59.7 80 43.8
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 1.1e-06 59.3 83 42.2
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 1.4e-06 58.9 109 35.8
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 2.4e-06 58.2 76 39.5
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 3.1e-06 57.8 113 38.9
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 4.1e-06 57.4 110 33.6
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 5.3e-06 57.0 78 41.0
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 5.3e-06 57.0 78 41.0
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 5.3e-06 57.0 84 40.5
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 5.3e-06 57.0 77 41.6
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 7.0e-06 56.6 107 35.5
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 7.0e-06 56.6 77 40.3
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 7.0e-06 56.6 77 40.3
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 9.1e-06 56.2 88 39.8


User provided reference genes

Program Settings