Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 7.4e-81 303.9 164 100.0
Sopen10g030070 Solanum pennellii HOM05D004531 ORTHO05D005484 7.4e-81 303.9 164 100.0
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 1.5e-78 296.2 164 97.6
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 3.6e-75 285.0 164 92.7
Nitab4.5_0002805g0150 Nicotiana tabacum HOM05D004531 ORTHO05D005484 8.0e-75 283.9 164 92.1
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.0e-74 283.5 164 92.1
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 3.1e-71 271.9 164 89.0
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 2.0e-70 269.2 164 88.4
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 4.0e-66 255.0 197 72.6
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 3.1e-63 245.4 164 76.2
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 2.7e-62 242.3 164 78.0
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 2.7e-62 242.3 164 78.0
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 2.7e-62 242.3 164 77.4
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 1.7e-61 239.6 164 76.8
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 2.9e-61 238.8 164 73.8
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 6.5e-61 237.7 164 76.2
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 1.1e-60 236.9 164 74.4
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 5.5e-60 234.6 164 73.2
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 2.7e-59 232.3 164 73.2
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 4.7e-59 231.5 163 74.2
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 6.1e-59 231.1 164 73.2
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 8.0e-59 230.7 164 74.4
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 1.0e-58 230.3 164 72.6
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.0e-58 230.3 164 72.6
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 1.4e-58 229.9 164 72.6
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 4.0e-58 228.4 164 72.0
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 5.2e-58 228.0 164 72.0
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 8.8e-58 227.3 164 73.2
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 8.8e-58 227.3 164 73.2
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.2e-57 226.9 164 72.0
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 1.5e-57 226.5 164 72.0
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 1.5e-57 226.5 164 72.6
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 1.5e-57 226.5 164 72.6
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 1.5e-57 226.5 164 72.0
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.5e-57 226.5 164 73.8
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 2.6e-57 225.7 164 71.3
FAN16G0044 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.4e-57 225.3 164 71.3
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 5.7e-57 224.6 164 73.2
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 9.8e-57 223.8 164 70.1
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 1.3e-56 223.4 164 70.7
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 2.2e-56 222.6 164 69.5
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 3.7e-56 221.9 164 70.7
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 6.3e-56 221.1 166 70.5
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 6.3e-56 221.1 164 69.5
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 1.1e-55 220.3 164 71.3
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 1.8e-55 219.5 164 67.1
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 1.8e-55 219.5 164 65.9
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 3.1e-55 218.8 164 71.3
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 1.2e-54 216.9 184 65.2
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 1.6e-54 216.5 166 71.1
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 2.0e-54 216.1 164 65.2
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 2.0e-54 216.1 164 67.7
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 2.7e-54 215.7 164 68.9
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 3.5e-54 215.3 164 67.7
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 3.5e-54 215.3 166 70.5
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 4.5e-54 214.9 164 68.3
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 4.5e-54 214.9 164 67.1
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 1.3e-53 213.4 164 65.9
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 2.9e-53 212.2 173 65.9
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 3.8e-53 211.8 164 67.1
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 3.8e-53 211.8 164 67.7
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 6.5e-53 211.1 164 65.9
FAN21G3808 Fragaria x ananassa HOM05D004531 ORTHO05D005484 8.6e-53 210.7 149 73.2
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 8.6e-53 210.7 164 68.3
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 1.1e-52 210.3 164 67.1
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 1.5e-52 209.9 165 68.5
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 1.9e-52 209.5 164 65.9
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 4.2e-52 208.4 154 69.5
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 5.5e-52 208.0 150 74.0
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 5.5e-52 208.0 164 68.3
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 7.2e-52 207.6 164 65.9
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 7.2e-52 207.6 164 63.4
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 1.2e-51 206.8 164 64.0
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 1.6e-51 206.5 164 64.6
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.6e-51 206.5 166 67.5
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 3.6e-51 205.3 164 64.6
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 4.7e-51 204.9 164 62.8
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 8.0e-51 204.1 164 65.9
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 5.2e-50 201.4 166 66.3
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 8.9e-50 200.7 166 66.3
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 2.0e-49 199.5 164 64.6
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 2.8e-48 195.7 164 64.6
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 3.7e-48 195.3 154 65.6
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 8.3e-48 194.1 188 59.0
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 3.1e-47 192.2 164 59.8
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 4.1e-47 191.8 164 60.4
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 4.1e-47 191.8 164 60.4
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 4.1e-47 191.8 164 60.4
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 4.1e-47 191.8 164 60.4
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 4.1e-47 191.8 164 60.4
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 7.0e-47 191.0 164 59.8
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 7.0e-47 191.0 164 61.0
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 1.6e-46 189.9 167 58.7
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 2.0e-46 189.5 164 59.8
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 2.0e-46 189.5 164 59.8
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 2.7e-46 189.1 166 64.5
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 3.5e-46 188.7 164 59.8
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 7.8e-46 187.6 164 61.6
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 1.7e-45 186.4 135 73.3
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 2.3e-45 186.0 164 59.8
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 2.3e-45 186.0 241 48.5
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 5.0e-45 184.9 164 58.5
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 8.6e-45 184.1 170 58.2
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 8.6e-45 184.1 164 58.5
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 8.6e-45 184.1 164 58.5
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 7.3e-44 181.0 164 58.5
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 1.2e-43 180.3 154 61.0
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 1.6e-43 179.9 164 59.1
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 2.1e-43 179.5 164 57.9
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 1.0e-42 177.2 165 56.4
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 7.5e-41 171.0 221 49.8
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 1.4e-39 166.8 294 41.2
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 1.4e-39 166.8 133 65.4
FAN25G0149 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.5e-38 162.2 118 71.2
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 3.9e-37 158.7 139 60.4
CDE07G0548 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 5.0e-37 158.3 139 59.0
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 3.4e-33 145.6 164 47.0
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 4.6e-30 135.2 165 47.3
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 1.1e-28 130.6 113 58.4
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 1.2e-27 127.1 100 65.0
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 1.2e-27 127.1 164 46.3
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 1.8e-26 123.2 74 82.4
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 9.9e-25 117.5 75 76.0
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 2.4e-23 112.8 216 38.9
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 9.2e-23 110.9 164 42.7
Ah.13g077510 Amaranthus hybridus HOM05D004531 ORTHO05D005484 5.1e-21 105.1 163 42.3
MD11G1228400 Malus domestica HOM05D004531 ORTHO05D005484 2.8e-19 99.4 66 78.8
TWI38G0613 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 3.6e-19 99.0 124 48.4
CSS0027948 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 1.1e-18 97.4 97 55.7
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 6.8e-18 94.7 72 61.1
PRCOL_00003072 Prasinoderma coloniale HOM05D004531 ORTHO05D005484 2.0e-17 93.2 201 37.3
CDE07G1261 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 3.4e-17 92.4 66 69.7
Zm00001eb262530 Zea mays HOM05D000031 ORTHO05D445172 3.4e-17 92.4 105 47.6
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 4.4e-17 92.0 51 88.2
ATR1096G046 Amborella trichopoda HOM05D004531 ORTHO05D005484 1.4e-15 87.0 69 63.8
MCO16G699 Micromonas commoda HOM05D004531 ORTHO05D005484 1.4e-15 87.0 175 37.7
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 1.9e-15 86.7 172 38.4
ECA238G1549 Erigeron canadensis HOM05D004531 ORTHO05D005484 2.1e-14 83.2 58 70.7
SalBow8G3341 Salvia bowleyana HOM05D004531 ORTHO05D005484 6.6e-13 78.2 85 52.9
Carub.0007s2695 Capsella rubella HOM05D004531 ORTHO05D005484 6.2e-11 71.6 110 39.1
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 1.1e-10 70.9 85 44.7
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 5.2e-10 68.6 45 71.1
Ca_08745_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 3.4e-09 65.9 153 32.7
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 1.9e-07 60.1 46 58.7
MD03G1213700 Malus domestica HOM05D004531 ORTHO05D005484 1.6e-06 57.0 47 63.8
Zm00001eb180730 Zea mays HOM05D004531 ORTHO05D005484 1.6e-06 57.0 46 52.2
Cre13.g573050 Chlamydomonas reinhardtii HOM05D004531 ORTHO05D005484 6.0e-06 55.1 226 27.0
PSO210G7246 Papaver somniferum HOM05D000014 ORTHO05D000016 6.0e-06 55.1 40 65.0


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