Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 2.3e-131 472.2 236 100.0
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 5.6e-130 467.6 236 98.7
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 1.3e-123 446.4 240 94.2
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.6e-105 386.3 238 84.0
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.1e-101 373.6 246 81.7
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 1.4e-96 356.7 236 79.2
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 1.6e-81 306.6 242 65.7
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 4.5e-79 298.5 244 65.2
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 1.3e-78 297.0 251 61.4
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 2.5e-77 292.7 240 62.5
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 4.2e-77 292.0 239 65.3
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 3.0e-75 285.8 241 60.2
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 8.8e-75 284.3 247 64.0
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 3.3e-74 282.3 242 60.3
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 4.3e-74 282.0 252 61.9
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 4.3e-74 282.0 243 61.7
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 2.2e-73 279.6 249 61.0
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 2.8e-73 279.3 240 60.4
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 3.7e-73 278.9 247 61.9
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 6.3e-73 278.1 202 67.8
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 4.1e-72 275.4 244 59.0
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 4.1e-72 275.4 247 60.7
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 5.3e-72 275.0 241 61.8
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 6.9e-72 274.6 237 60.3
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 9.1e-72 274.2 206 65.5
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.6e-71 272.7 257 59.9
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.3e-70 270.4 241 60.2
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 2.9e-70 269.2 239 63.2
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 8.5e-70 267.7 270 57.0
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 1.1e-69 267.3 241 58.1
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.1e-69 267.3 247 59.9
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.4e-69 266.9 237 61.6
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 5.5e-69 265.0 238 58.0
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 9.4e-69 264.2 237 61.6
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 1.2e-68 263.8 238 60.5
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 1.6e-68 263.5 237 57.8
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.6e-68 262.3 240 58.8
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 4.7e-68 261.9 237 57.0
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 4.7e-68 261.9 238 60.5
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 7.9e-68 261.2 201 65.7
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 7.9e-68 261.2 240 60.0
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 3.0e-67 259.2 211 64.0
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 3.0e-67 259.2 245 54.3
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 3.9e-67 258.8 239 56.9
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 5.1e-67 258.5 208 63.0
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 1.1e-66 257.3 240 57.9
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 4.4e-66 255.4 243 57.6
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 5.7e-66 255.0 239 58.2
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 5.7e-66 255.0 237 56.1
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 9.7e-66 254.2 239 57.3
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.7e-65 253.4 196 63.3
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 2.2e-65 253.1 211 61.6
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 2.8e-65 252.7 240 57.1
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 2.8e-65 252.7 238 56.7
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 3.7e-65 252.3 240 57.1
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 3.7e-65 252.3 240 57.1
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 4.8e-65 251.9 243 56.4
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 1.1e-64 250.8 247 53.0
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 1.8e-64 250.0 212 60.4
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 2.4e-64 249.6 245 55.9
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 3.1e-64 249.2 247 55.9
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 3.1e-64 249.2 247 55.9
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 3.1e-64 249.2 208 61.5
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 7.0e-64 248.1 246 57.3
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 1.5e-63 246.9 245 54.7
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 2.0e-63 246.5 207 61.8
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 2.6e-63 246.1 242 55.0
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 3.5e-63 245.7 247 55.9
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 7.7e-63 244.6 207 60.9
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 7.7e-63 244.6 199 63.8
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 1.7e-62 243.4 203 63.1
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 1.7e-62 243.4 244 51.6
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 3.8e-62 242.3 193 62.7
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 6.5e-62 241.5 203 62.6
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 2.5e-61 239.6 237 57.4
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 9.4e-61 237.7 204 60.8
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 4.7e-60 235.3 233 54.5
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 1.0e-59 234.2 193 59.6
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 6.7e-59 231.5 240 54.6
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 3.3e-58 229.2 244 52.9
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.7e-57 225.7 205 57.6
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 1.4e-56 223.8 227 51.5
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 1.4e-56 223.8 239 51.9
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 1.2e-55 220.7 236 51.7
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 6.5e-54 214.9 155 67.7
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 8.5e-54 214.5 195 56.9
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 7.2e-53 211.5 211 55.0
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 2.1e-52 209.9 130 71.5
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 2.3e-51 206.5 315 44.8
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 1.7e-49 200.3 255 46.7
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 1.7e-49 200.3 171 59.6
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.2e-44 184.1 108 76.9
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 2.1e-44 183.3 110 73.6
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 8.0e-44 181.4 110 73.6
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 7.5e-42 174.9 134 56.0
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.8e-41 172.9 108 69.4
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 6.3e-41 171.8 109 70.6
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 1.4e-40 170.6 170 57.6
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 2.0e-34 150.2 87 77.0
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 3.4e-34 149.4 183 43.7
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 1.7e-33 147.1 96 72.9
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 4.6e-31 139.0 127 56.7
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 2.0e-23 113.6 136 52.9
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 3.0e-22 109.8 77 70.1
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 3.0e-22 109.8 65 75.4
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 3.0e-22 109.8 65 75.4
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 1.1e-21 107.8 177 36.2
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 3.3e-21 106.3 71 70.4
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 5.6e-21 105.5 76 68.4
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 7.3e-21 105.1 122 42.6
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 1.4e-19 100.9 151 43.7
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 4.0e-19 99.4 60 76.7
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 1.5e-13 80.9 172 31.4
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 2.8e-12 76.6 58 69.0
Oeu013881.1 Olea europaea HOM05D006876 ORTHO05D008708 4.0e-11 72.8 94 51.1
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 1.3e-09 67.8 44 63.6
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 3.7e-09 66.2 53 66.0
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 8.4e-09 65.1 53 64.2
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 2.4e-08 63.5 140 34.3


User provided reference genes

Program Settings