Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g028320 Solanum pennellii HOM05D000252 ORTHO05D393476 8.7e-34 146.4 72 100.0
Nitab4.5_0001284g0110 Nicotiana tabacum HOM05D000252 ORTHO05D000307 1.8e-07 58.9 38 76.3
Nitab4.5_0011992g0020 Nicotiana tabacum HOM05D000252 ORTHO05D000307 3.1e-07 58.2 38 76.3
Rhsim08G0175400 Rhododendron simsii HOM05D000252 ORTHO05D000307 3.1e-07 58.2 49 63.3
CsaV3_1G001280 Cucumis sativus L. HOM05D000252 ORTHO05D000307 4.1e-07 57.8 37 75.7
Duzib205G1688 Durio zibethinus HOM05D000252 ORTHO05D000307 4.1e-07 57.8 49 61.2
Migut.O00132 Erythranthe guttata HOM05D000252 ORTHO05D000307 5.3e-07 57.4 35 80.0
Peaxi162Scf00089g01623 Petunia axillaris HOM05D000252 ORTHO05D000307 5.3e-07 57.4 38 73.7
Sopen06g027900 Solanum pennellii HOM05D000252 ORTHO05D000307 5.3e-07 57.4 38 78.9
PGSC0003DMG401026994 Solanum tuberosum HOM05D000252 ORTHO05D000307 5.3e-07 57.4 35 82.9
CAN.G993.36 Capsicum annuum HOM05D000252 ORTHO05D000307 6.9e-07 57.0 31 90.3
Cc04_g12570 Coffea canephora HOM05D000252 ORTHO05D000307 6.9e-07 57.0 38 71.1
MELO3C026276.2 Cucumis melo HOM05D000252 ORTHO05D000307 6.9e-07 57.0 37 75.7
SalBow5G2237 Salvia bowleyana HOM05D000252 ORTHO05D000307 6.9e-07 57.0 31 90.3
SalBow5G3395 Salvia bowleyana HOM05D000252 ORTHO05D000307 6.9e-07 57.0 31 90.3
MSTRG.23155 Avicennia marina HOM05D000252 ORTHO05D000307 9.1e-07 56.6 31 87.1
Haze_07553 Corylus avellana HOM05D000252 ORTHO05D000307 9.1e-07 56.6 48 56.2
Lj5A127T57 Lonicera japonica HOM05D000252 ORTHO05D000307 9.1e-07 56.6 31 87.1
Solyc06g071610.3 Solanum lycopersicum HOM05D000252 ORTHO05D000307 9.1e-07 56.6 35 82.9
Cpa.g.sc153.21 Carica papaya HOM05D000252 ORTHO05D000307 1.2e-06 56.2 30 83.3
MD06G1170000 Malus domestica HOM05D000252 ORTHO05D000307 1.2e-06 56.2 38 71.1
ClCG06G017210 Citrullus lanatus HOM05D000252 ORTHO05D000307 1.5e-06 55.8 37 70.3
GSVIVG01007686001 Vitis vinifera HOM05D000252 ORTHO05D000307 1.5e-06 55.8 31 87.1
Sed0014216 Sechium edule HOM05D000252 ORTHO05D000307 2.0e-06 55.5 36 75.0
Dinv20619 Davidia involucrata HOM05D000252 ORTHO05D000307 2.6e-06 55.1 31 83.9
Gohir.D07G068800 Gossypium hirsutum HOM05D000252 ORTHO05D000307 2.6e-06 55.1 49 59.2
Gorai.001G072300 Gossypium raimondii HOM05D000252 ORTHO05D000307 2.6e-06 55.1 49 59.2
Manes.06G108100 Manihot esculenta HOM05D000252 ORTHO05D000307 2.6e-06 55.1 29 86.2
Manes.14G062800 Manihot esculenta HOM05D000252 ORTHO05D000307 2.6e-06 55.1 31 83.9
Oeu001680.1 Olea europaea HOM05D000252 ORTHO05D000307 2.6e-06 55.1 35 80.0
SGA_v2.0_scaffold90G27876 Striga asiatica HOM05D000252 ORTHO05D000307 2.6e-06 55.1 31 83.9
vmacro23267 Vaccinium macrocarpon HOM05D000252 ORTHO05D000307 2.6e-06 55.1 31 83.9
Atru.chr9.2540_Atru.chr9.2541 Acer truncatum HOM05D000252 ORTHO05D000307 3.4e-06 54.7 38 71.1
CAN.G338.5 Capsicum annuum HOM05D000252 ORTHO05D000307 3.4e-06 54.7 39 76.9
ClCG01G013360 Citrullus lanatus HOM05D000252 ORTHO05D000307 3.4e-06 54.7 32 81.2
MD14G1175600 Malus domestica HOM05D000252 ORTHO05D000307 3.4e-06 54.7 38 68.4
Thecc.03G024000 Theobroma cacao HOM05D000252 ORTHO05D000307 3.4e-06 54.7 35 77.1
vmacro19324 Vaccinium macrocarpon HOM05D000252 ORTHO05D000307 3.4e-06 54.7 27 92.6
CSS0011596 Camellia sinensis var. sinensis HOM05D000252 ORTHO05D000307 4.5e-06 54.3 35 74.3
CSS0043931 Camellia sinensis var. sinensis HOM05D000252 ORTHO05D000307 4.5e-06 54.3 35 74.3
Gohir.A07G064000 Gossypium hirsutum HOM05D000252 ORTHO05D000307 4.5e-06 54.3 36 72.2
Hund02769 Selenicereus undatus HOM05D000252 ORTHO05D000307 4.5e-06 54.3 31 80.6
Sc12g0005170 Simmondsia chinensis HOM05D000252 ORTHO05D000307 4.5e-06 54.3 38 65.8
Solyc03g112540.4 Solanum lycopersicum HOM05D000252 ORTHO05D000307 4.5e-06 54.3 26 100.0
Sopen03g031600 Solanum pennellii HOM05D000252 ORTHO05D000307 4.5e-06 54.3 26 100.0
PGSC0003DMG400018174 Solanum tuberosum HOM05D000252 ORTHO05D000307 4.5e-06 54.3 26 100.0
THA.LOC104809250 Tarenaya hassleriana HOM05D000252 ORTHO05D000307 4.5e-06 54.3 36 77.8
CANSAT80G0801 Cannabis sativa HOM05D000252 ORTHO05D000307 5.9e-06 53.9 49 57.1
PGR044G2483 Punica granatum HOM05D000252 ORTHO05D000307 5.9e-06 53.9 31 83.9


User provided reference genes

Program Settings