Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g027130 Solanum pennellii HOM05D000092 ORTHO05D000042 1.8e-81 305.8 154 100.0
Solyc10g074640.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.5e-70 269.6 153 89.5
CAN.G641.10 Capsicum annuum HOM05D000092 ORTHO05D000042 2.6e-43 179.1 155 63.2
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 2.2e-42 176.0 155 61.3
CAN.G1161.51 Capsicum annuum HOM05D000092 ORTHO05D000042 6.4e-42 174.5 121 75.2
CAN.G641.2 Capsicum annuum HOM05D000092 ORTHO05D000042 1.6e-40 169.9 146 62.3
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 2.7e-40 169.1 150 60.7
Sopen04g001580 Solanum pennellii HOM05D000092 ORTHO05D000042 4.6e-40 168.3 155 60.6
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 7.8e-40 167.5 155 61.3
PGSC0003DMG401016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.1e-39 164.9 156 62.8
CAN.G1161.13 Capsicum annuum HOM05D000092 ORTHO05D000042 2.5e-38 162.5 153 58.2
Sopen12g022450 Solanum pennellii HOM05D000092 ORTHO05D000042 4.3e-38 161.8 151 62.3
PGSC0003DMG400021948 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.6e-38 161.4 155 60.6
Solyc12g044190.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 7.3e-38 161.0 111 73.9
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 7.3e-38 161.0 121 70.2
Solyc04g005550.2 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.2e-37 160.2 146 61.0
CAN.G1161.16 Capsicum annuum HOM05D000092 ORTHO05D000042 2.1e-37 159.5 151 60.9
CAN.G960.38 Capsicum annuum HOM05D000092 ORTHO05D000042 6.2e-37 157.9 148 60.8
PGSC0003DMG402017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.1e-36 155.6 155 57.4
Solyc02g036280.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.3e-34 150.2 150 57.3
CAN.G641.7 Capsicum annuum HOM05D000092 ORTHO05D000042 2.2e-34 149.4 145 57.2
Sopen02g011670 Solanum pennellii HOM05D000092 ORTHO05D000042 2.2e-34 149.4 150 56.7
PGSC0003DMG400010953 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.4e-33 146.7 150 58.0
Peaxi162Scf00253g00314 Petunia axillaris HOM05D000092 ORTHO05D000042 3.2e-33 145.6 156 53.8
Solyc10g055080.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 4.1e-33 145.2 121 64.5
Peaxi162Scf00000g00843 Petunia axillaris HOM05D000092 ORTHO05D001673 5.4e-33 144.8 161 52.8
Sopen01g028960 Solanum pennellii HOM05D000092 ORTHO05D000042 7.1e-33 144.4 111 66.7
PGSC0003DMG400021477 Solanum tuberosum HOM05D000092 ORTHO05D000042 7.1e-33 144.4 150 56.0
PGSC0003DMG402011427 Solanum tuberosum HOM05D000092 ORTHO05D000042 9.2e-33 144.1 103 73.8
Solyc12g016220.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.7e-32 142.5 116 66.4
Solyc10g055060.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.3e-31 139.4 121 63.6
Sopen04g025680 Solanum pennellii HOM05D000092 ORTHO05D000042 3.3e-30 135.6 102 70.6
CAN.G1161.52 Capsicum annuum HOM05D000092 ORTHO05D000042 7.3e-30 134.4 127 59.8
CAN.G641.6 Capsicum annuum HOM05D000092 ORTHO05D000042 7.3e-30 134.4 121 61.2
Peaxi162Scf00003g04738 Petunia axillaris HOM05D000092 ORTHO05D000042 1.4e-28 130.2 120 61.7
CAN.G638.66 Capsicum annuum HOM05D000092 ORTHO05D000042 1.8e-28 129.8 94 72.3
PGSC0003DMG402016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.8e-28 129.8 121 62.0
CAN.G638.65 Capsicum annuum HOM05D000092 ORTHO05D000042 5.2e-28 128.3 97 67.0
Peaxi162Scf00007g00431 Petunia axillaris HOM05D000092 ORTHO05D000042 6.8e-28 127.9 129 57.4
Solyc04g057840.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.5e-27 126.7 102 65.7
CAN.G1161.11 Capsicum annuum HOM05D000092 ORTHO05D000042 4.4e-27 125.2 121 59.5
PGSC0003DMG403000927 Solanum tuberosum HOM05D000092 ORTHO05D000042 7.6e-27 124.4 95 68.4
CAN.G641.5 Capsicum annuum HOM05D000092 ORTHO05D000042 1.3e-26 123.6 100 68.0
Sopen10g029660 Solanum pennellii HOM05D000092 ORTHO05D000042 4.9e-26 121.7 155 54.2
PGSC0003DMG400019094 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.4e-26 121.3 152 53.3
CAN.G1117.2 Capsicum annuum HOM05D000092 ORTHO05D000042 1.4e-25 120.2 93 68.8
Sopen10g029640 Solanum pennellii HOM05D000092 ORTHO05D000042 3.2e-25 119.0 116 61.2
CAN.G360.7 Capsicum annuum HOM05D000092 ORTHO05D000042 7.1e-25 117.9 107 62.6
CAN.G1161.41 Capsicum annuum HOM05D000092 ORTHO05D000042 9.3e-25 117.5 94 67.0
CAN.G3331.2 Capsicum annuum HOM05D000092 ORTHO05D000042 1.2e-24 117.1 92 69.6
Sopen12g008040 Solanum pennellii HOM05D000092 ORTHO05D000042 1.2e-24 117.1 113 60.2
Nitab4.5_0000358g0090 Nicotiana tabacum HOM05D000092 ORTHO05D000042 3.5e-24 115.5 127 56.7
CAN.G1161.47 Capsicum annuum HOM05D000092 ORTHO05D000042 7.8e-24 114.4 105 55.2
PGSC0003DMG400018900 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.0e-23 114.0 91 69.2
Solyc12g044200.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.3e-23 113.6 134 53.0
PGSC0003DMG403008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.7e-23 113.2 127 55.1
Solyc07g044785.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.0e-23 112.5 95 63.2
Peaxi162Scf00003g04724 Petunia axillaris HOM05D000092 ORTHO05D000042 8.7e-23 110.9 192 43.8
Sopen04g019300 Solanum pennellii HOM05D000092 ORTHO05D000042 1.1e-22 110.5 87 66.7
Solyc01g067160.4 Solanum lycopersicum HOM05D000092 ORTHO05D000042 7.3e-22 107.8 81 69.1
Peaxi162Scf00739g00123 Petunia axillaris HOM05D000092 ORTHO05D000042 3.6e-21 105.5 134 49.3
Solyc12g044170.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 5.3e-20 101.7 102 56.9
CAN.G959.29 Capsicum annuum HOM05D000092 ORTHO05D000042 1.2e-19 100.5 75 72.0
PGSC0003DMG400010887 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.5e-19 100.1 123 52.0
Solyc04g048910.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 4.4e-19 98.6 108 53.7
Sopen10g029280 Solanum pennellii HOM05D000092 ORTHO05D000042 4.4e-19 98.6 116 53.4
PGSC0003DMG400011426 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.4e-17 92.8 91 62.6
Peaxi162Scf00003g00479 Petunia axillaris HOM05D000092 ORTHO05D000042 9.3e-17 90.9 101 53.5
CSS0020621 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.1e-12 75.9 122 36.9
Rhsim02G0094400 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.0e-12 75.5 133 36.8
Rhsim02G0093800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.2e-11 73.9 131 37.4
CSS0047500 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.5e-11 72.0 119 37.0
vmacro09387 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 4.5e-11 72.0 98 44.9
Dinv24998 Davidia involucrata HOM05D000092 ORTHO05D016246 7.6e-11 71.2 143 35.7
Rhsim02G0094600 Rhododendron simsii HOM05D000092 ORTHO05D000042 9.9e-11 70.9 128 35.9
Dinv25011 Davidia involucrata HOM05D000092 ORTHO05D000042 2.2e-10 69.7 111 41.4
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 2.9e-10 69.3 132 35.6
CAN.G960.28 Capsicum annuum HOM05D000092 ORTHO05D000042 3.8e-10 68.9 78 55.1
Dinv25018 Davidia involucrata HOM05D000092 ORTHO05D000042 3.8e-10 68.9 101 39.6
Dinv25008 Davidia involucrata HOM05D000092 ORTHO05D000042 1.4e-09 67.0 107 40.2
vmacro07802 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.9e-09 66.6 117 37.6
CANSAT11G0720 Cannabis sativa HOM05D000092 ORTHO05D000042 4.2e-09 65.5 127 34.6
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 7.1e-09 64.7 106 38.7
PGSC0003DMG400046580 Solanum tuberosum HOM05D000092 ORTHO05D000042 9.3e-09 64.3 73 52.1
Rhsim03G0040200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.2e-08 63.9 147 36.1
vmacro23053 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.6e-08 63.5 84 39.3
Dinv25005 Davidia involucrata HOM05D000092 ORTHO05D000042 2.1e-08 63.2 120 37.5
CANSAT11G1876 Cannabis sativa HOM05D000092 ORTHO05D000042 2.7e-08 62.8 137 32.1
arahy.Tifrunner.gnm1.ann1.0R956I Arachis hypogaea HOM05D000092 ORTHO05D000042 3.5e-08 62.4 112 32.1
CiPaw.08G170600 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.5e-08 62.4 142 33.1
Manes.03G060801 Manihot esculenta HOM05D000092 ORTHO05D000042 3.5e-08 62.4 124 32.3
vmacro23497 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 4.6e-08 62.0 133 33.1
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-08 61.6 119 38.7
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-08 61.6 119 38.7
Peaxi162Scf00406g01117 Petunia axillaris HOM05D000092 ORTHO05D000042 6.0e-08 61.6 90 41.1
Dinv02211 Davidia involucrata HOM05D000092 ORTHO05D000042 7.9e-08 61.2 130 30.8
vmacro23052 Vaccinium macrocarpon HOM05D000092 ORTHO05D013389 7.9e-08 61.2 84 38.1
VMungo1383G3284 Vigna mungo HOM05D000092 ORTHO05D000042 1.0e-07 60.8 144 31.2
Ciclev10003128m.g Citrus clementina HOM05D000092 ORTHO05D000042 1.3e-07 60.5 119 31.9
Rhsim02G0094000 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.3e-07 60.5 131 35.1
PGSC0003DMG400043863 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.8e-07 60.1 78 52.6
Manes.11G052130 Manihot esculenta HOM05D000092 ORTHO05D000042 2.3e-07 59.7 89 32.6
PGSC0003DMG403003025 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.3e-07 59.7 38 78.9
Hma1.2p1_0060F.1_g033260 Hydrangea macrophylla HOM05D000768 ORTHO05D000042 3.0e-07 59.3 133 30.1
Lj2C33T20 Lonicera japonica HOM05D000092 ORTHO05D000042 3.0e-07 59.3 107 33.6
Manes.11G052160 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-07 59.3 89 32.6
Nn5g28231 Nelumbo nucifera HOM05D000092 ORTHO05D000042 3.9e-07 58.9 103 33.0
arahy.Tifrunner.gnm1.ann1.FV5VRM Arachis hypogaea HOM05D000092 ORTHO05D000042 5.1e-07 58.5 109 33.0
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 5.1e-07 58.5 126 32.5
Dinv07585 Davidia involucrata HOM05D000092 ORTHO05D000042 5.1e-07 58.5 120 31.7
Manes.07G060708 Manihot esculenta HOM05D000092 ORTHO05D000042 5.1e-07 58.5 149 32.2
Manes.07G060866 Manihot esculenta HOM05D000092 ORTHO05D000042 6.7e-07 58.2 149 32.2
CSS0020293 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 8.7e-07 57.8 121 34.7
PGSC0003DMG402008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 8.7e-07 57.8 78 50.0
Gohir.A13G217800 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.1e-06 57.4 86 39.5
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 1.5e-06 57.0 126 30.2
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 1.5e-06 57.0 126 30.2
CiPaw.06G073300 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.9e-06 56.6 81 38.3
FvH4_6g02760 Fragaria vesca HOM05D000092 ORTHO05D000042 1.9e-06 56.6 97 39.2
arahy.Tifrunner.gnm1.ann1.RQU8DI Arachis hypogaea HOM05D000092 ORTHO05D000042 2.5e-06 56.2 110 32.7
CiPaw.08G169900 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.5e-06 56.2 136 30.9
Thecc.05G211500 Theobroma cacao HOM05D000092 ORTHO05D000042 2.5e-06 56.2 75 41.3
CiPaw.15G126100 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.3e-06 55.8 124 33.9
ClCG02G016170 Citrullus lanatus HOM05D000092 ORTHO05D000042 3.3e-06 55.8 111 32.4
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.3e-06 55.8 77 39.0
Rhsim04G0094600 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.3e-06 55.8 102 36.3
Sabra13G0028000 Salix brachista HOM05D000092 ORTHO05D000042 3.3e-06 55.8 77 39.0
PGSC0003DMG400008185 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.3e-06 55.8 73 49.3
CiPaw.08G134200 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.3e-06 55.5 136 30.1
Phvul.010G091751 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 4.3e-06 55.5 129 27.1
GSVIVG01023548001 Vitis vinifera HOM05D000092 ORTHO05D000042 4.3e-06 55.5 82 36.6
FAN14G1121 Fragaria x ananassa HOM05D000092 ORTHO05D000042 5.6e-06 55.1 96 34.4
RhsimUnG0090700 Rhododendron simsii HOM05D000046 ORTHO05D000042 5.6e-06 55.1 133 33.8
Sopen04g018240 Solanum pennellii HOM05D000092 ORTHO05D000042 5.6e-06 55.1 58 51.7
arahy.Tifrunner.gnm1.ann1.AJLP3G Arachis hypogaea HOM05D000092 ORTHO05D000042 7.4e-06 54.7 101 29.7
CANSAT11G1772 Cannabis sativa HOM05D000092 ORTHO05D000042 7.4e-06 54.7 123 33.3
Gohir.D13G221800 Gossypium hirsutum HOM05D000092 ORTHO05D000042 7.4e-06 54.7 87 36.8
Lj1A1085T44 Lonicera japonica HOM05D000092 ORTHO05D000042 7.4e-06 54.7 81 40.7
Manes.10G028501 Manihot esculenta HOM05D000092 ORTHO05D000042 7.4e-06 54.7 80 35.0
Phvul.004G048000 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 7.4e-06 54.7 62 45.2
PGSC0003DMG400018901 Solanum tuberosum HOM05D000092 ORTHO05D000042 7.4e-06 54.7 93 41.9
Gohir.A04G037500 Gossypium hirsutum HOM05D000092 ORTHO05D000042 9.6e-06 54.3 98 33.7


User provided reference genes

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