Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g024140 Solanum pennellii HOM05D028602 ORTHO05D005554 2.7e-61 238.4 117 100.0
Sopen10g024080 Solanum pennellii HOM05D028602 ORTHO05D005554 2.3e-60 235.3 117 99.1
Sopen10g024010 Solanum pennellii HOM05D002907 ORTHO05D005554 1.2e-24 116.7 61 90.2
PGSC0003DMG400039849 Solanum tuberosum HOM05D002907 ORTHO05D005554 9.5e-22 107.1 87 62.1
PGSC0003DMG400042496 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.1e-20 103.6 84 60.7
Solyc10g054170.3 Solanum lycopersicum HOM05D028602 ORTHO05D005554 7.5e-19 97.4 49 93.9
Solyc10g054200.1 Solanum lycopersicum HOM05D028602 ORTHO05D005554 2.4e-17 92.4 47 91.5
Solyc08g028810.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 7.0e-17 90.9 60 66.7
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 6.0e-16 87.8 61 65.6
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 6.0e-16 87.8 61 65.6
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.9e-15 85.1 61 63.9
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 8.6e-15 84.0 68 63.2
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 8.6e-15 84.0 68 63.2
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.6e-15 84.0 61 62.3
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 8.6e-15 84.0 68 63.2
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 8.6e-15 84.0 68 63.2
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.9e-14 82.8 68 63.2
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.9e-14 82.8 61 62.3
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.3e-14 82.0 57 63.2
Solyc09g150120.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.3e-14 81.6 75 57.3
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.3e-14 80.9 51 74.5
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 9.5e-14 80.5 56 64.3
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 1.2e-13 80.1 61 59.0
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 1.2e-13 80.1 61 59.0
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.7e-13 78.2 51 72.5
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 1.4e-12 76.6 52 69.2
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 2.3e-12 75.9 69 55.1
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.3e-12 75.9 51 70.6
Peaxi162Scf00297g00049 Petunia axillaris HOM05D002907 ORTHO05D005554 3.1e-12 75.5 60 55.0
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.5e-11 73.2 68 57.4
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 2.0e-11 72.8 52 61.5
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.6e-11 72.4 51 66.7
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 4.4e-11 71.6 49 67.3
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 5.8e-11 71.2 43 72.1
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 1.7e-10 69.7 68 54.4
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 3.7e-10 68.6 57 52.6
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 3.7e-10 68.6 57 52.6
Nitab4.5_0000037g0120 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.7e-10 68.6 63 60.3
CAN.G25.7 Capsicum annuum HOM05D002907 ORTHO05D005554 6.4e-10 67.8 56 57.1
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.4e-10 67.8 52 61.5
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 1.4e-09 66.6 68 54.4
DCAR_015940 Daucus carota HOM05D002907 ORTHO05D005554 7.1e-09 64.3 81 42.0
CAN.G183.9 Capsicum annuum HOM05D002907 ORTHO05D005554 2.7e-08 62.4 62 48.4
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 3.5e-08 62.0 43 65.1
Solyc10g054270.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.6e-08 61.6 55 61.8
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 1.0e-07 60.5 55 45.5
CANSAT25G3758 Cannabis sativa HOM05D002907 ORTHO05D005554 1.3e-07 60.1 56 48.2
DCAR_029864 Daucus carota HOM05D002907 ORTHO05D005554 1.3e-07 60.1 63 42.9
Nitab4.5_0000359g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.0e-07 58.9 64 48.4
CAN.G865.8 Capsicum annuum HOM05D002907 ORTHO05D005554 5.1e-07 58.2 56 53.6
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 6.6e-07 57.8 61 42.6
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 6.6e-07 57.8 63 46.0
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.6e-07 57.8 79 43.0
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-06 57.0 67 53.7
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-06 57.0 67 53.7
DCAR_009226 Daucus carota HOM05D000033 ORTHO05D000913 3.3e-06 55.5 63 44.4
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 4.3e-06 55.1 63 41.3
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.6e-06 54.7 36 66.7
TWI79G1688 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 7.3e-06 54.3 64 40.6


User provided reference genes

Program Settings