Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g024010 Solanum pennellii HOM05D002907 ORTHO05D005554 8.7e-57 223.4 112 100.0
PGSC0003DMG400039849 Solanum tuberosum HOM05D002907 ORTHO05D005554 8.5e-44 180.3 109 81.7
PGSC0003DMG400042496 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.0e-41 173.3 110 78.2
Solyc08g028810.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.9e-36 155.2 105 69.5
Solyc10g054270.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.9e-36 155.2 106 80.2
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 5.1e-33 144.4 109 63.3
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 5.1e-33 144.4 109 63.3
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.9e-30 134.0 109 60.6
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.5e-29 132.9 109 56.9
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.5e-29 132.9 103 61.2
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 7.7e-29 130.6 109 58.7
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.7e-28 129.4 106 63.2
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 2.2e-28 129.0 106 59.4
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 6.5e-28 127.5 106 59.4
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-27 126.7 106 57.5
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-27 126.3 106 60.4
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-27 126.3 106 60.4
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 1.4e-27 126.3 97 62.9
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 1.2e-26 123.2 109 55.0
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 1.6e-26 122.9 106 57.5
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 1.6e-26 122.9 106 57.5
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.7e-26 122.1 109 55.0
Solyc09g150120.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.6e-26 121.7 110 53.6
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 3.6e-26 121.7 109 54.1
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 1.4e-25 119.8 110 53.6
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-25 119.8 106 57.5
Sopen10g024080 Solanum pennellii HOM05D028602 ORTHO05D005554 1.8e-25 119.4 61 91.8
Sopen10g024140 Solanum pennellii HOM05D028602 ORTHO05D005554 8.8e-25 117.1 61 90.2
Solyc02g014410.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.5e-24 116.3 110 62.7
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.4e-24 114.0 100 57.0
Peaxi162Scf00297g00049 Petunia axillaris HOM05D002907 ORTHO05D005554 9.7e-24 113.6 100 55.0
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 9.7e-24 113.6 97 57.7
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 1.7e-23 112.8 109 53.2
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.1e-22 108.2 109 49.5
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 4.1e-22 108.2 106 50.9
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 5.3e-22 107.8 110 50.0
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 1.6e-21 106.3 104 49.0
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 2.0e-21 105.9 104 49.0
CAN.G25.7 Capsicum annuum HOM05D002907 ORTHO05D005554 5.9e-21 104.4 105 51.4
CAN.G183.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.0e-20 103.6 102 51.0
CAN.G865.8 Capsicum annuum HOM05D002907 ORTHO05D005554 3.8e-20 101.7 97 51.5
CANSAT25G3758 Cannabis sativa HOM05D002907 ORTHO05D005554 5.0e-20 101.3 109 45.0
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.0e-20 101.3 128 46.1
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 8.5e-20 100.5 105 53.3
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 8.5e-20 100.5 105 53.3
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 1.6e-18 96.3 109 42.2
DCAR_015940 Daucus carota HOM05D002907 ORTHO05D005554 2.1e-18 95.9 107 42.1
Nitab4.5_0000359g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.7e-18 95.5 106 49.1
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 8.0e-18 94.0 109 41.3
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 1.8e-17 92.8 106 39.6
DCAR_029864 Daucus carota HOM05D002907 ORTHO05D005554 2.3e-17 92.4 106 38.7
DCAR_009226 Daucus carota HOM05D000033 ORTHO05D000913 6.7e-17 90.9 107 41.1
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 3.3e-16 88.6 106 39.6
Solyc05g018860.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 9.7e-16 87.0 105 45.7
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 1.7e-15 86.3 92 50.0
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 2.2e-15 85.9 89 47.2
Nitab4.5_0000037g0120 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.8e-15 85.5 72 63.9
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 3.1e-14 82.0 93 47.3
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 7.0e-14 80.9 78 53.8
Nitab4.5_0000051g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.2e-13 80.1 105 41.0
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.6e-13 79.7 104 44.2
Sopen01g015020 Solanum pennellii HOM05D002907 ORTHO05D005554 2.0e-13 79.3 66 59.1
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.5e-13 78.6 108 42.6
TWI79G1688 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 1.7e-12 76.3 107 32.7
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 1.5e-11 73.2 107 37.4
Sopen05g018840 Solanum pennellii HOM05D002907 ORTHO05D005554 1.5e-11 73.2 66 54.5
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 4.2e-11 71.6 45 68.9
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.7e-10 68.9 68 52.9
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.0e-10 67.4 87 46.0
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.0e-10 67.4 68 54.4
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.8e-09 66.2 70 47.1
CAN.G1342.3 Capsicum annuum HOM05D001433 ORTHO05D005554 4.0e-09 65.1 67 49.3
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.0e-09 65.1 107 34.6
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.0e-09 65.1 107 34.6
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 6.8e-09 64.3 106 29.2
QL07p005779 Quercus lobata HOM05D002907 ORTHO05D005554 1.5e-08 63.2 66 45.5
QL07p006362 Quercus lobata HOM05D002907 ORTHO05D005554 1.5e-08 63.2 66 45.5
Nitab4.5_0005521g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.7e-08 61.2 66 51.5
Sopen04g009160 Solanum pennellii HOM05D045494 ORTHO05D026150 5.7e-08 61.2 48 62.5
Solyc04g018050.1 Solanum lycopersicum HOM05D045494 ORTHO05D026150 9.8e-08 60.5 48 62.5
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.7e-07 59.7 66 42.4
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 1.7e-07 59.7 111 29.7
Nitab4.5_0000488g0190 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.2e-07 59.3 105 35.2
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 2.2e-07 59.3 109 29.4
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 2.2e-07 59.3 109 29.4
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 4.8e-07 58.2 103 35.0
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 4.8e-07 58.2 103 35.0
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 4.8e-07 58.2 102 27.5
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.3e-07 57.8 62 48.4
Aqoxy3G02886 Aquilegia oxysepala HOM05D003414 ORTHO05D003913 1.1e-06 57.0 100 35.0
Solyc10g054200.1 Solanum lycopersicum HOM05D028602 ORTHO05D005554 1.1e-06 57.0 41 70.7
TWI32G0194 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.4e-06 55.8 98 32.7
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.4e-06 55.8 98 32.7
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 9.1e-06 53.9 102 29.4


User provided reference genes

Program Settings