Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 2.8e-58 228.4 116 100.0
Solyc08g067650.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.9e-31 138.7 89 76.4
Solyc02g032630.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.5e-27 126.3 95 71.6
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.3e-25 117.9 94 61.7
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 5.3e-25 117.9 96 59.4
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.5e-24 114.8 103 53.4
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.2e-22 107.5 99 53.5
Sopen08g021590 Solanum pennellii HOM05D007931 ORTHO05D010331 9.4e-22 107.1 72 73.6
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.7e-21 105.5 108 51.9
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.0e-21 104.0 101 47.5
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-19 100.1 99 50.5
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-19 98.2 98 50.0
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.7e-19 97.1 99 49.5
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.3e-18 96.7 77 58.4
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-18 96.3 87 52.9
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.8e-18 94.7 99 46.5
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.8e-18 94.7 85 56.5
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.3e-18 94.0 98 50.0
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-17 93.2 71 63.4
Sopen11g020420 Solanum pennellii HOM05D004800 ORTHO05D010331 7.0e-17 90.9 75 62.7
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.1e-17 90.5 82 54.9
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 3.5e-16 88.6 75 58.7
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 7.7e-16 87.4 74 58.1
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-15 86.3 78 55.1
PGSC0003DMG400014334 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.7e-15 86.3 92 50.0
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.5e-14 83.2 91 46.2
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.7e-13 79.0 81 51.9
Peaxi162Scf00457g00055 Petunia axillaris HOM05D007931 ORTHO05D010331 2.7e-13 79.0 98 42.9
Nitab4.5_0005933g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.7e-13 78.2 67 58.2
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-12 77.0 63 61.9
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-12 76.3 85 48.2
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.0e-12 75.1 63 61.9
Nitab4.5_0001238g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.6e-11 72.4 60 58.3
PGSC0003DMG400002205 Solanum tuberosum HOM05D000927 ORTHO05D000850 4.4e-11 71.6 42 83.3
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.8e-11 70.5 91 39.6
Nitab4.5_0003244g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.8e-10 68.9 77 44.2
Nitab4.5_0003434g0110 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.8e-10 68.2 103 35.9
Solyc04g063330.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 4.8e-10 68.2 59 52.5
Nitab4.5_0003727g0050 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-09 66.2 58 55.2
Nitab4.5_0004037g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.4e-09 65.9 79 43.0
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.1e-09 65.1 62 56.5
Nitab4.5_0006590g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.4e-09 64.7 84 41.7
Nitab4.5_0000760g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.5e-08 62.0 81 39.5
Nitab4.5_0002239g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.9e-08 61.2 99 34.3
PGSC0003DMG400040885 Solanum tuberosum HOM05D007931 ORTHO05D010331 5.9e-08 61.2 58 55.2
Nitab4.5_0005292g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.0e-07 58.2 67 49.3
Nitab4.5_0000132g0210 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.6e-07 57.8 55 49.1
Nitab4.5_0000016g0590 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-06 57.0 66 47.0
Nitab4.5_0000139g0190 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-06 57.0 54 48.1
Nitab4.5_0002698g0150 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.5e-06 56.6 116 32.8
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 1.5e-06 56.6 42 69.0
Nitab4.5_0000515g0140 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-06 56.2 45 64.4


User provided reference genes

Program Settings