Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.3e-120 436.4 222 100.0
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 1.9e-116 422.5 222 96.8
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 6.2e-115 417.5 222 94.1
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 4.1e-90 335.1 222 76.1
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.6e-84 315.8 205 78.0
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 2.5e-63 246.1 225 56.4
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 1.2e-62 243.8 223 55.2
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 2.3e-61 239.6 225 55.6
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.2e-60 237.3 221 53.4
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 2.6e-60 236.1 218 55.0
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 3.7e-59 232.3 222 55.9
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 6.3e-59 231.5 222 54.1
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 5.4e-58 228.4 222 54.1
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 9.2e-58 227.6 230 53.9
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 1.6e-57 226.9 224 52.7
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.5e-55 220.3 224 54.0
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 1.9e-55 219.9 224 50.9
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 2.5e-55 219.5 221 51.6
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 3.3e-55 219.2 224 54.9
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.6e-54 216.9 224 51.8
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 2.3e-53 213.0 224 53.6
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.2e-52 210.7 253 47.8
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 3.4e-52 209.1 209 52.2
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 7.5e-52 208.0 223 52.5
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 2.2e-51 206.5 220 49.5
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 3.7e-51 205.7 221 50.7
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 1.1e-50 204.1 222 51.4
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 3.2e-50 202.6 227 48.9
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 7.8e-49 198.0 213 49.8
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 7.8e-49 198.0 228 49.1
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 3.9e-48 195.7 234 47.9
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 3.9e-48 195.7 220 50.5
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 3.9e-48 195.7 220 50.5
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 9.5e-47 191.0 223 47.1
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.2e-46 190.7 244 45.5
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 8.0e-46 188.0 257 45.5
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 3.1e-45 186.0 265 42.6
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 1.5e-44 183.7 246 44.7
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 4.4e-44 182.2 248 46.4
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.9e-42 176.8 224 45.5
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.2e-41 174.1 222 46.4
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 3.9e-40 169.1 222 45.5
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 8.1e-38 161.4 247 40.9
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 8.1e-38 161.4 224 47.3
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 7.5e-36 154.8 238 42.9
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.2e-35 153.3 140 59.3
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 2.2e-35 153.3 228 42.5
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.3e-31 138.3 185 47.0
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 5.2e-29 132.1 257 39.7
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 2.4e-26 123.2 200 38.5
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 9.2e-26 121.3 164 45.1
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 4.6e-25 119.0 165 46.7
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 3.0e-24 116.3 161 44.7
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 5.1e-24 115.5 161 45.3
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 5.1e-24 115.5 161 45.3
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.2e-22 110.9 166 42.2
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 3.1e-21 106.3 217 37.3
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 9.9e-20 101.3 158 41.1
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 9.9e-20 101.3 147 43.5
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 2.7e-17 93.2 75 56.0
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 3.0e-16 89.7 71 60.6
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 7.6e-12 75.1 66 57.6
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 5.6e-07 58.9 49 57.1


User provided reference genes

Program Settings