Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g022200 Solanum pennellii HOM05D016312 ORTHO05D019320 5.5e-66 254.2 133 100.0
Solyc10g050510.1 Solanum lycopersicum HOM05D016312 ORTHO05D019320 2.4e-21 105.9 57 100.0
PGSC0003DMG400006231 Solanum tuberosum HOM05D016312 ORTHO05D019320 2.3e-19 99.4 57 96.5
CSS0005552 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-16 88.6 52 75.0
CSS0025606 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-16 88.6 52 75.0
CSS0038035 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-16 88.6 52 75.0
Sopen03g026940 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-15 84.3 52 75.0
Sopen01g010560 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-15 84.0 52 73.1
PGSC0003DMG400006230 Solanum tuberosum HOM05D016312 ORTHO05D019320 1.3e-14 83.6 57 84.2
Ah.04g154410 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.8e-14 82.4 52 71.2
Sopen02g024260 Solanum pennellii HOM05D000002 ORTHO05D019320 8.3e-14 80.9 52 73.1
CSS0038315 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-12 76.6 52 67.3
CSS0022944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-12 75.1 52 67.3
CSS0040508 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-12 75.1 52 67.3
CSS0014934 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-12 74.7 52 65.4
CSS0026784 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-12 74.3 52 65.4
CSS0028687 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-11 73.6 46 65.2
CSS0044097 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-11 73.6 46 67.4
CSS0045864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-11 73.6 48 68.8
Peaxi162Scf00003g01940 Petunia axillaris HOM05D016312 ORTHO05D019320 1.7e-11 73.2 54 74.1
CSS0004972 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.9e-11 72.4 49 67.3
CSS0017110 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-11 72.4 46 63.0
CSS0032272 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-11 72.4 52 59.6
CSS0012254 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-11 72.0 52 65.4
CSS0040656 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-11 71.6 46 65.2
CSS0012246 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-11 70.9 46 65.2
CSS0014720 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-11 70.9 46 63.0
CSS0018553 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-11 70.9 46 63.0
CSS0047340 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-11 70.9 46 65.2
Peaxi162Scf00003g01928 Petunia axillaris HOM05D016312 ORTHO05D019320 8.6e-11 70.9 54 72.2
RcHm_v2.0_Chr2g0159601 Rosa chinensis HOM05D000002 ORTHO05D000001 8.6e-11 70.9 52 61.5
VMungo0251G0487 Vigna mungo HOM05D012227 ORTHO05D000001 8.6e-11 70.9 52 65.4
CSS0011335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-10 70.1 46 60.9
CSS0047281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-10 70.1 46 60.9
CSS0020121 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-10 69.7 46 60.9
CSS0031425 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-10 69.7 46 60.9
CSS0040881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-10 69.7 52 61.5
CSS0045651 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-10 69.7 52 57.7
Thecc.04G110300 Theobroma cacao HOM05D000002 ORTHO05D010765 1.9e-10 69.7 44 70.5
CSS0004011 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-10 69.3 46 60.9
Nitab4.5_0009440g0040 Nicotiana tabacum HOM05D016312 ORTHO05D019320 2.5e-10 69.3 52 73.1
CSS0041759 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-10 68.9 46 63.0
CSS0026945 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-10 68.6 46 60.9
CSS0035998 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-10 68.6 46 58.7
CSS0014153 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-10 68.2 46 58.7
CSS0021759 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-10 68.2 46 58.7
CSS0022318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-10 68.2 46 60.9
CSS0004936 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.3e-10 67.8 46 58.7
CSS0007936 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-10 67.4 46 58.7
CSS0020987 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-10 67.4 46 58.7
CSS0049344 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-10 67.4 46 63.0
CSS0045748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-09 66.2 46 58.7
CSS0006396 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-09 65.5 46 60.9
CSS0046743 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-09 65.5 46 60.9
ECA247G0633 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-09 65.5 52 51.9
CSS0033931 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-09 65.1 52 59.6
RcHm_v2.0_Chr1g0383411 Rosa chinensis HOM05D000002 ORTHO05D000001 6.1e-09 64.7 52 57.7
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-08 63.5 52 53.8
CSS0013895 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-08 63.2 44 65.9
CSS0021259 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-08 63.2 42 66.7
CSS0036372 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-08 63.2 46 56.5
RcHm_v2.0_Chr5g0066231 Rosa chinensis HOM05D000002 ORTHO05D000001 1.8e-08 63.2 52 55.8
AUR62007962 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.3e-08 62.8 52 55.8
Sopen03g027060 Solanum pennellii HOM05D000002 ORTHO05D000034 2.3e-08 62.8 41 73.2
CSS0005563 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.4 46 54.3
ECA240G1216 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-08 62.4 52 51.9
HanXRQChr02g0039821 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-08 62.4 52 51.9
HanXRQChr03g0082121 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-08 62.4 52 51.9
HanXRQChr05g0135361 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-08 62.4 52 51.9
HanXRQChr06g0180631 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-08 62.4 52 51.9
RcHm_v2.0_Chr2g0144381 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.4 52 53.8
RcHm_v2.0_Chr6g0259091 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.4 52 53.8
ECA233G4270 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-08 62.0 52 51.9
ECA234G0394 Erigeron canadensis HOM05D005925 ORTHO05D000001 4.0e-08 62.0 52 51.9
ECA247G0579 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-08 62.0 52 48.1
HanXRQChr02g0050701 Helianthus annuus HOM05D000002 ORTHO05D000001 4.0e-08 62.0 52 51.9
HanXRQChr04g0123831 Helianthus annuus HOM05D000002 ORTHO05D000001 4.0e-08 62.0 52 51.9
HanXRQChr05g0163231 Helianthus annuus HOM05D000002 ORTHO05D000001 4.0e-08 62.0 52 50.0
HanXRQChr12g0363471 Helianthus annuus HOM05D000002 ORTHO05D000001 4.0e-08 62.0 52 50.0
ECA232G4055 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
ECA233G0481 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
ECA233G0511 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
ECA233G0623 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
ECA236G0974 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
ECA238G0523 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
ECA240G2188 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
ECA240G3538 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
TPR.G20757 Trifolium pratense HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 53.8
Ah.16g102970 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.8e-08 61.2 52 51.9
CSS0026866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-08 61.2 46 54.3
CAN.G208.26 Capsicum annuum HOM05D000236 ORTHO05D000192 6.8e-08 61.2 48 47.9
ECA234G0751 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-08 61.2 52 51.9
ECA248G1532 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-08 61.2 52 50.0
HanXRQChr14g0441811 Helianthus annuus HOM05D000002 ORTHO05D000001 6.8e-08 61.2 52 50.0
AUR62037521 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.9e-08 60.8 52 53.8
ECA232G2907 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-08 60.8 52 50.0
GSVIVG01009548001 Vitis vinifera HOM05D000369 ORTHO05D000253 8.9e-08 60.8 60 45.0
ECA246G4054 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 52 51.9
MD11G1016700 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-07 60.5 52 57.7
ECA232G0970 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-07 60.1 48 52.1
ECA233G4344 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-07 60.1 52 50.0
ECA232G1993 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-07 59.7 52 51.9
RcHm_v2.0_Chr4g0390931 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-07 59.7 52 51.9
CSS0006961 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 57.7
CSS0014302 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 57.7
CSS0024348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 57.7
CSS0028743 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 57.7
CSS0039499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 57.7
CSS0043278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 57.7
CSS0044482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 57.7
CSS0047410 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 57.7
ECA232G1418 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 48.1
ECA234G4276 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 48.1
ECA238G3579 Erigeron canadensis HOM05D000002 ORTHO05D001134 3.4e-07 58.9 52 48.1
RcHm_v2.0_Chr5g0076641 Rosa chinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.9 52 51.9
TPR.G8661 Trifolium pratense HOM05D000002 ORTHO05D000001 3.4e-07 58.9 48 52.1
CSS0003097 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 39 64.1
CSS0012466 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 55.8
ECA232G2531 Erigeron canadensis HOM05D000620 ORTHO05D000537 4.4e-07 58.5 52 48.1
ECA233G5708 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA236G0816 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA236G1135 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA236G2482 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA236G3719 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA238G0101 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA238G0412 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 50.0
ECA238G1308 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.4e-07 58.5 52 48.1
ECA238G3259 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA238G4751 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA240G0189 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA240G3408 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA246G1062 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 50.0
ECA246G2321 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA246G3176 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA247G3904 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA248G0111 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
ECA248G2070 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 52 48.1
RcHm_v2.0_Chr5g0040291 Rosa chinensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 51 51.0
CSS0030319 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-07 58.2 42 61.9
CSS0044851 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-07 58.2 42 61.9
CSS0047704 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-07 58.2 42 61.9
ECA232G2889 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-07 57.8 52 50.0
ECA240G1911 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-07 57.8 52 48.1
ECA247G1980 Erigeron canadensis HOM05D000315 ORTHO05D000001 7.5e-07 57.8 52 48.1
ECA232G0083 Erigeron canadensis HOM05D000014 ORTHO05D000093 9.8e-07 57.4 48 47.9
ECA236G2821 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.8e-07 57.4 52 48.1
ECA240G0213 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.8e-07 57.4 52 50.0
ECA240G0389 Erigeron canadensis HOM05D000002 ORTHO05D001134 9.8e-07 57.4 52 46.2
ECA240G2807 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.8e-07 57.4 52 48.1
ECA246G0345 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 57.0 52 46.2
FvH4_5g37183 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-06 57.0 52 50.0
ECA234G1050 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 56.6 52 46.2
ECA247G2113 Erigeron canadensis HOM05D000031 ORTHO05D000030 2.2e-06 56.2 52 48.1
CSS0028280 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 55.8 42 61.9
CSS0049112 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D020236 2.9e-06 55.8 64 40.6
ECA238G2217 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-06 55.8 49 44.9
ECA248G3701 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-06 55.8 52 46.2
FvH4_4g04791 Fragaria vesca HOM05D000002 ORTHO05D000001 2.9e-06 55.8 52 46.2
Sopen05g027630 Solanum pennellii HOM05D000002 ORTHO05D001134 2.9e-06 55.8 31 77.4
ECA238G2847 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-06 55.5 52 46.2
ECA240G3441 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-06 55.5 52 46.2
RcHm_v2.0_Chr1g0368461 Rosa chinensis HOM05D000002 ORTHO05D000001 3.7e-06 55.5 52 50.0
RcHm_v2.0_Chr6g0304531 Rosa chinensis HOM05D000002 ORTHO05D000001 3.7e-06 55.5 52 48.1
ECA248G0448 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-06 55.1 48 47.9
MD04G1043200 Malus domestica HOM05D000002 ORTHO05D000001 4.9e-06 55.1 52 48.1
CANSAT25G2057 Cannabis sativa HOM05D000002 ORTHO05D001134 6.4e-06 54.7 42 52.4
ECA240G1249 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-06 54.7 48 45.8
VMungo1309G1929 Vigna mungo HOM05D000002 ORTHO05D000001 6.4e-06 54.7 51 49.0


User provided reference genes

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