Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 5.3e-47 190.7 94 100.0
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 7.6e-38 160.2 127 69.3
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 2.7e-35 151.8 127 65.4
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.5e-33 146.0 127 62.2
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 9.6e-33 143.3 97 76.3
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.8e-31 139.0 122 62.3
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 7.6e-30 133.7 127 55.9
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 9.9e-30 133.3 127 55.1
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 1.7e-29 132.5 127 55.1
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 2.9e-29 131.7 127 56.7
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 1.4e-28 129.4 127 54.3
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 1.9e-28 129.0 127 55.9
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 4.2e-28 127.9 127 52.8
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 7.1e-28 127.1 104 61.5
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.2e-27 126.3 128 53.9
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 2.1e-27 125.6 127 52.8
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 4.6e-27 124.4 126 52.4
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 4.6e-27 124.4 126 52.4
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.6e-27 124.4 124 53.2
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.6e-27 124.4 124 53.2
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.0e-26 123.2 126 51.6
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 1.0e-26 123.2 127 51.2
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 1.3e-26 122.9 126 51.6
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 1.8e-26 122.5 128 54.7
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 1.8e-26 122.5 97 68.0
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 2.3e-26 122.1 126 50.8
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 2.3e-26 122.1 120 53.3
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 6.7e-26 120.6 122 52.5
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 1.1e-25 119.8 124 51.6
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 1.1e-25 119.8 97 68.0
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 1.5e-25 119.4 126 50.8
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.9e-25 119.0 124 50.0
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 4.3e-25 117.9 124 50.0
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 5.6e-25 117.5 127 50.4
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 7.4e-25 117.1 125 52.0
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 7.4e-25 117.1 126 51.6
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 9.6e-25 116.7 125 52.0
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 1.3e-24 116.3 125 52.0
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 1.3e-24 116.3 124 50.8
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.3e-24 116.3 122 51.6
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 2.1e-24 115.5 127 52.0
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 2.1e-24 115.5 125 48.8
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 2.1e-24 115.5 128 52.3
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.7e-24 114.8 123 50.4
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 4.8e-24 114.4 125 51.2
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 6.2e-24 114.0 127 49.6
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 8.2e-24 113.6 127 50.4
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 8.2e-24 113.6 126 49.2
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 1.4e-23 112.8 125 50.4
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 1.8e-23 112.5 126 49.2
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 4.0e-23 111.3 127 49.6
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 4.0e-23 111.3 129 48.8
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 9.0e-23 110.2 124 50.8
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 1.2e-22 109.8 124 50.0
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.2e-22 109.8 124 50.0
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 1.2e-22 109.8 123 48.8
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 2.6e-22 108.6 127 48.8
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 2.6e-22 108.6 125 46.4
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 4.5e-22 107.8 121 49.6
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 4.5e-22 107.8 126 49.2
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 4.5e-22 107.8 120 51.7
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 5.8e-22 107.5 124 49.2
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.8e-22 107.5 127 48.0
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 1.3e-21 106.3 123 48.0
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.7e-21 105.9 124 48.4
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 2.9e-21 105.1 124 46.8
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.9e-21 105.1 122 49.2
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 3.8e-21 104.8 125 46.4
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 3.8e-21 104.8 128 49.2
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 4.9e-21 104.4 126 48.4
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 6.5e-21 104.0 124 47.6
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 6.5e-21 104.0 127 46.5
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 8.4e-21 103.6 125 45.6
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 8.4e-21 103.6 127 45.7
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 1.1e-20 103.2 125 46.4
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 1.1e-20 103.2 125 46.4
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 1.1e-20 103.2 125 46.4
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 1.1e-20 103.2 125 46.4
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 1.1e-20 103.2 119 47.1
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 1.4e-20 102.8 128 44.5
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 1.4e-20 102.8 125 46.4
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 1.4e-20 102.8 125 46.4
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 2.5e-20 102.1 126 46.0
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 5.5e-20 100.9 123 46.3
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 7.1e-20 100.5 126 46.0
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 7.1e-20 100.5 126 46.0
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 9.3e-20 100.1 121 45.5
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 9.3e-20 100.1 125 46.4
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 1.2e-19 99.8 126 44.4
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 2.1e-19 99.0 124 46.0
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 2.7e-19 98.6 122 48.4
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 3.5e-19 98.2 128 43.0
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 4.6e-19 97.8 122 48.4
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 7.9e-19 97.1 129 43.4
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.0e-18 96.7 112 50.0
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 1.3e-18 96.3 125 43.2
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 3.0e-18 95.1 127 42.5
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 3.0e-18 95.1 130 43.8
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 3.9e-18 94.7 124 43.5
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 3.9e-18 94.7 125 43.2
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 3.9e-18 94.7 127 42.5
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 5.1e-18 94.4 125 45.6
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 5.1e-18 94.4 122 44.3
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 8.7e-18 93.6 124 43.5
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 8.7e-18 93.6 125 43.2
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 8.7e-18 93.6 125 43.2
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 1.1e-17 93.2 126 45.2
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 1.9e-17 92.4 124 43.5
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 1.9e-17 92.4 126 44.4
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 1.9e-17 92.4 127 41.7
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 1.9e-17 92.4 128 43.0
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 4.3e-17 91.3 127 40.2
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 2.8e-16 88.6 103 48.5
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 4.1e-15 84.7 126 41.3
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 2.0e-14 82.4 70 62.9
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 9.4e-12 73.6 93 44.1
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 4.6e-11 71.2 129 35.7
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 2.0e-09 65.9 68 54.4
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 2.2e-08 62.4 45 62.2
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 2.8e-08 62.0 52 61.5
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 3.7e-08 61.6 72 48.6
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 3.7e-08 61.6 97 37.1
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 8.2e-08 60.5 67 49.3
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.8e-07 59.3 97 38.1
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 4.1e-07 58.2 70 52.9
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 9.1e-07 57.0 46 58.7
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 9.1e-07 57.0 39 64.1


User provided reference genes

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