Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g021280 Solanum pennellii HOM05D008041 ORTHO05D000385 5.9e-86 320.9 164 100.0
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 1.9e-36 156.4 228 46.1
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 1.9e-36 156.4 228 46.1
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 1.9e-36 156.4 228 46.1
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 2.5e-36 156.0 228 46.1
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 5.6e-36 154.8 228 45.6
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 5.6e-36 154.8 228 45.6
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 6.2e-35 151.4 228 45.2
Solyc10g061845.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 6.8e-34 147.9 228 44.7
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 2.0e-33 146.4 228 43.0
Sopen01g007430 Solanum pennellii HOM05D008041 ORTHO05D000385 1.2e-30 137.1 218 42.2
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.9e-29 132.1 202 43.1
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 4.7e-27 125.2 201 40.3
Sopen04g010730 Solanum pennellii HOM05D008041 ORTHO05D000385 7.5e-25 117.9 196 42.3
Sopen12g014810 Solanum pennellii HOM05D008041 ORTHO05D000385 2.9e-24 115.9 195 42.6
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 3.7e-24 115.5 197 41.6
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 6.4e-24 114.8 193 43.0
Sopen08g007140 Solanum pennellii HOM05D000107 ORTHO05D000570 1.0e-21 107.5 157 43.9
EL10Ac2g02894 Beta vulgaris HOM05D004615 ORTHO05D000385 6.6e-21 104.8 157 37.6
Solyc07g020915.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 8.6e-21 104.4 170 42.9
PGSC0003DMG400046273 Solanum tuberosum HOM05D008041 ORTHO05D000385 3.3e-20 102.4 67 71.6
AUR62034499 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.1e-19 99.8 156 34.6
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 6.2e-19 98.2 97 60.8
Sopen08g019920 Solanum pennellii HOM05D008041 ORTHO05D000385 6.2e-19 98.2 97 61.9
Solyc01g034040.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.4e-18 97.1 64 73.4
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.8e-18 96.7 64 71.9
Sopen03g027000 Solanum pennellii HOM05D008041 ORTHO05D000385 1.8e-18 96.7 94 58.5
Sopen11g019240 Solanum pennellii HOM05D008041 ORTHO05D000385 1.5e-17 93.6 167 38.3
Solyc10g018713.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.3e-16 90.5 64 70.3
Sopen08g013620 Solanum pennellii HOM05D008041 ORTHO05D000385 1.7e-16 90.1 66 62.1
Solyc05g032825.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.1e-15 87.4 64 67.2
PGSC0003DMG400034515 Solanum tuberosum HOM05D008041 ORTHO05D000385 2.4e-15 86.3 168 35.1
Sopen02g004250 Solanum pennellii HOM05D000004 ORTHO05D000385 2.7e-14 82.8 85 58.8
AUR62037174 Chenopodium quinoa HOM05D009343 ORTHO05D000385 3.5e-14 82.4 166 35.5
AUR62032537 Chenopodium quinoa HOM05D009343 ORTHO05D011970 7.8e-14 81.3 166 35.5
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.0e-13 80.9 136 37.5
PGSC0003DMG400042422 Solanum tuberosum HOM05D008041 ORTHO05D000385 1.3e-13 80.5 75 50.7
AUR62037194 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.3e-13 79.7 156 34.6
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 2.3e-13 79.7 163 35.0
Solyc01g016416.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 6.6e-13 78.2 86 58.1
Solyc05g041113.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 6.6e-13 78.2 49 75.5
Sopen03g016060 Solanum pennellii HOM05D008041 ORTHO05D000385 1.1e-12 77.4 81 54.3
Sopen02g007300 Solanum pennellii HOM05D002469 ORTHO05D000385 2.5e-12 76.3 66 54.5
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-12 75.9 211 26.1
Solyc08g016567.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.3e-12 75.9 56 69.6
Solyc08g016677.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.6e-11 73.6 103 47.6
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.8e-11 72.8 205 29.8
Sopen10g008660 Solanum pennellii HOM05D008041 ORTHO05D000385 2.8e-11 72.8 62 58.1
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 3.6e-11 72.4 129 36.4
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.7e-11 72.0 225 24.9
Solyc11g042873.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.7e-11 72.0 46 71.7
Sopen09g018580 Solanum pennellii HOM05D004615 ORTHO05D000385 6.2e-11 71.6 68 51.5
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.1e-10 70.9 225 24.4
HanXRQChr02g0040071 Helianthus annuus HOM05D004615 ORTHO05D000385 5.2e-10 68.6 231 27.3
HanXRQChr04g0100871 Helianthus annuus HOM05D004615 ORTHO05D000385 3.4e-09 65.9 231 26.8
HanXRQChr09g0240121 Helianthus annuus HOM05D004615 ORTHO05D000385 3.4e-09 65.9 231 26.8
Ah.02g122150 Amaranthus hybridus HOM05D004615 ORTHO05D000385 7.6e-09 64.7 235 25.5
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.9e-09 64.3 193 25.4
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-08 63.9 72 40.3
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-08 63.9 72 40.3
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-08 63.9 72 40.3
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-08 63.9 72 40.3
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-08 63.9 72 40.3
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.7e-08 63.5 179 29.1
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 2.2e-08 63.2 59 45.8
AUR62035731 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.2e-08 63.2 156 26.9
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 3.8e-08 62.4 183 25.1
AUR62029526 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.4e-08 61.6 131 29.0
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 8.4e-08 61.2 72 38.9
AUR62031112 Chenopodium quinoa HOM05D009343 ORTHO05D000385 8.4e-08 61.2 162 29.0
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 8.4e-08 61.2 108 35.2
AUR62005789 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.1e-07 60.8 62 41.9
AUR62040424 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.1e-07 60.8 195 27.7
Psat7g246320 Pisum sativum HOM05D009811 ORTHO05D007166 1.4e-07 60.5 122 32.0
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 1.9e-07 60.1 59 45.8
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 1.9e-07 60.1 119 31.9
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 2.4e-07 59.7 68 41.2
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 4.2e-07 58.9 119 31.9
AUR62041975 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.4e-07 58.5 149 30.9
AUR62014273 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.1e-07 58.2 219 22.8
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.1e-07 58.2 121 30.6
AUR62039813 Chenopodium quinoa HOM05D009343 ORTHO05D011970 7.1e-07 58.2 157 28.0
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 7.1e-07 58.2 81 35.8
EL10Ac9g20762 Beta vulgaris HOM05D004615 ORTHO05D000385 1.2e-06 57.4 89 38.2
Solyc03g063357.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.2e-06 57.4 69 52.2
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.6e-06 57.0 62 40.3
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.7e-06 56.2 221 24.9
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 2.7e-06 56.2 169 30.2
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.5e-06 55.8 219 25.6
AUR62004861 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.6e-06 55.5 108 30.6
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 4.6e-06 55.5 83 31.3
AUR62026239 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.6e-06 55.5 62 40.3
AUR62030145 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.6e-06 55.5 58 39.7
Hund12189 Selenicereus undatus HOM05D004615 ORTHO05D000385 4.6e-06 55.5 150 29.3
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 6.0e-06 55.1 60 40.0
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.0e-06 55.1 88 34.1
AUR62031149 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.0e-06 55.1 61 41.0
AUR62043436 Chenopodium quinoa HOM05D009343 ORTHO05D000385 6.0e-06 55.1 69 40.6


User provided reference genes

Program Settings