Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g020500 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-44 182.2 89 100.0
Sopen04g013750 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-12 75.1 77 41.6
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-12 75.1 77 41.6
Sopen08g017240 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-11 72.8 78 41.0
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 2.0e-11 72.4 73 46.6
Sopen04g035280 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-11 72.0 74 44.6
PSO541G4429 Papaver somniferum HOM05D000003 ORTHO05D000004 4.4e-11 71.2 74 36.5
CAN.G1549.10 Capsicum annuum HOM05D000003 ORTHO05D000004 5.7e-11 70.9 76 42.1
MBI17_g31747_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.5e-11 70.5 81 37.0
PSO017G3724 Papaver somniferum HOM05D000003 ORTHO05D000004 7.5e-11 70.5 74 39.2
MBI14_g25243_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.7e-10 69.3 73 41.1
PSO782G3067 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-10 69.3 73 39.7
PSO674G0014 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-10 67.8 73 39.7
Sopen01g037960 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-10 67.8 73 42.5
Sopen07g025600 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-10 67.8 72 40.3
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 6.3e-10 67.4 74 39.2
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 6.3e-10 67.4 73 39.7
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 6.3e-10 67.4 73 39.7
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 6.3e-10 67.4 73 39.7
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 6.3e-10 67.4 73 39.7
PSO478G4317 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-10 67.0 74 36.5
PSO513G0009 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-10 67.0 73 41.1
Sopen11g018640 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-10 67.0 68 41.2
Oeu044182.1 Olea europaea HOM05D000003 ORTHO05D000004 1.1e-09 66.6 74 39.2
PGSC0003DMG400013171 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.1e-09 66.6 73 39.7
PSO566G0125 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-09 66.2 74 36.5
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-09 66.2 74 39.2
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-09 66.2 74 39.2
SHI29190 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-09 66.2 73 38.4
Sopen10g025370 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-09 66.2 74 36.5
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-09 65.5 68 42.6
PSO210G3134 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-09 65.1 91 34.1
PSO478G4146 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-09 65.1 74 39.2
PSO596G0036 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-09 65.1 71 36.6
Aqoxy5G03103 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.1e-09 64.7 72 36.1
CAN.G308.58 Capsicum annuum HOM05D000005 ORTHO05D000012 4.1e-09 64.7 73 41.1
Oeu000958.1 Olea europaea HOM05D000412 ORTHO05D000429 4.1e-09 64.7 74 39.2
QL10p005473 Quercus lobata HOM05D000230 ORTHO05D000176 4.1e-09 64.7 74 37.8
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 5.4e-09 64.3 73 38.4
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 5.4e-09 64.3 73 38.4
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 5.4e-09 64.3 73 38.4
Sopen05g031780 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-09 64.3 74 36.5
Sopen06g002250 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-09 64.3 74 40.5
MBI19_g17590_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.0e-09 63.9 73 38.4
PSO393G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 7.0e-09 63.9 72 36.1
TWI36G1780 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.0e-09 63.9 68 42.6
Oeu038378.2 Olea europaea HOM05D000003 ORTHO05D001174 9.2e-09 63.5 74 37.8
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 9.2e-09 63.5 74 40.5
Aqoxy3G01491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-08 63.2 68 36.8
Aqoxy7G01788 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-08 63.2 67 37.3
PSO170G3677 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-08 63.2 71 39.4
QL02p088183 Quercus lobata HOM05D004630 ORTHO05D005727 1.2e-08 63.2 74 40.5
QL08p057946 Quercus lobata HOM05D000269 ORTHO05D005780 1.2e-08 63.2 74 37.8
GSVIVG01037622001 Vitis vinifera HOM05D000287 ORTHO05D002423 1.2e-08 63.2 64 46.9
Aqoxy3G01412 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-08 62.8 72 34.7
Aqoxy4G01286 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-08 62.8 67 38.8
PSO724G0774 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-08 62.8 73 35.6
PSO782G0582 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-08 62.8 73 34.2
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-08 62.8 74 39.2
QL07p018008 Quercus lobata HOM05D002389 ORTHO05D003227 1.6e-08 62.8 72 38.9
Aqoxy2G01405 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-08 62.4 73 34.2
Aqoxy2G01414 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-08 62.4 73 34.2
Aqoxy2G01461 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-08 62.4 72 33.3
PSO302G0219 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-08 62.4 74 32.4
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.7e-08 62.0 73 34.2
Oeu052231.1 Olea europaea HOM05D000003 ORTHO05D000004 2.7e-08 62.0 77 39.0
Sed0023069 Sechium edule HOM05D000003 ORTHO05D000004 2.7e-08 62.0 73 39.7
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.7e-08 62.0 68 41.2
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-08 61.6 67 41.8
PSO151G0176 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-08 61.6 74 35.1
PSO832G3039 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-08 61.6 75 38.7
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 3.5e-08 61.6 73 38.4
Oeu029571.1 Olea europaea HOM05D000554 ORTHO05D000860 4.5e-08 61.2 68 41.2
PSO170G2251 Papaver somniferum HOM05D000003 ORTHO05D000004 4.5e-08 61.2 71 40.8
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.5e-08 61.2 73 38.4
Aqoxy1G03564 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.9e-08 60.8 74 33.8
PSO063G7457 Papaver somniferum HOM05D000003 ORTHO05D000004 5.9e-08 60.8 73 35.6
PSO675G2039 Papaver somniferum HOM05D000003 ORTHO05D000004 5.9e-08 60.8 74 35.1
PSO832G1539 Papaver somniferum HOM05D000003 ORTHO05D000004 5.9e-08 60.8 73 35.6
PSO832G4384 Papaver somniferum HOM05D000003 ORTHO05D000004 5.9e-08 60.8 73 34.2
Aqoxy2G00310 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.8e-08 60.5 73 32.9
PSO017G4751 Papaver somniferum HOM05D000003 ORTHO05D000004 7.8e-08 60.5 73 34.2
PSO724G0020 Papaver somniferum HOM05D000003 ORTHO05D000004 7.8e-08 60.5 73 34.2
QL10p031139 Quercus lobata HOM05D000207 ORTHO05D001482 1.0e-07 60.1 67 40.3
Aqoxy3G02519 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-07 59.7 74 35.1
Aqoxy5G02123 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-07 59.7 73 34.2
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 1.3e-07 59.7 68 35.3
PSO339G6332 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-07 59.7 71 35.2
PSO478G1918 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-07 59.7 74 33.8
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-07 59.3 68 39.7
Atru.chr1.2603 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-07 58.9 67 44.8
Aqoxy4G00279 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.3e-07 58.9 74 31.1
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.3e-07 58.9 74 31.1
PSO151G0122 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-07 58.9 60 40.0
PSO339G3081 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-07 58.9 92 34.8
HanXRQChr09g0246731 Helianthus annuus HOM05D000003 ORTHO05D000004 2.9e-07 58.5 67 40.3
PSO104G0163 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-07 58.5 74 29.7
PSO478G4776 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-07 58.5 73 34.2
Atru.chr8.1740 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-07 58.2 68 38.2
Aqoxy1G02818 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.9e-07 58.2 73 34.2
HanXRQChr09g0261431 Helianthus annuus HOM05D000003 ORTHO05D000004 3.9e-07 58.2 67 40.3
MBI08_g39701_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.9e-07 58.2 72 33.3
MBI09_g09410_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.9e-07 58.2 73 38.4
PSO210G1926 Papaver somniferum HOM05D000003 ORTHO05D000004 3.9e-07 58.2 71 31.0
PSO561G0070 Papaver somniferum HOM05D000003 ORTHO05D000004 3.9e-07 58.2 74 35.1
ECA247G3056 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.0e-07 57.8 67 41.8
PSO210G2794 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-07 57.8 73 32.9
PSO478G4504 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-07 57.8 74 37.8
Aqoxy1G03267 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.6e-07 57.4 73 32.9
MELO3C022264.2 Cucumis melo HOM05D000003 ORTHO05D000004 6.6e-07 57.4 68 36.8
PSO067G0096 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-07 57.4 78 32.1
PSO781G0332 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-07 57.4 68 39.7
Aqoxy1G03403 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.6e-07 57.0 73 32.9
CSS0039230 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.6e-07 57.0 68 38.2
CSS0050470 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.6e-07 57.0 68 39.7
ECA234G4528 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.6e-07 57.0 67 40.3
PSO541G5183 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 57.0 75 36.0
PSO674G0005 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 57.0 71 36.6
QL02p054750 Quercus lobata HOM05D002264 ORTHO05D002413 8.6e-07 57.0 73 34.2
Atru.chr5.3362 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 56.6 67 40.3
Aqoxy2G01936 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-06 56.6 73 37.0
Aqoxy6G02506 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-06 56.6 67 34.3
HanXRQChr15g0497301 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-06 56.6 67 40.3
Atru.chr10.949 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.2 67 38.8
Atru.chr2.258 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.2 67 37.3
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.2 67 38.8
Cpa.g.sc17.180 Carica papaya HOM05D000003 ORTHO05D000004 1.5e-06 56.2 73 31.5
PSO017G0464 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 56.2 70 32.9
PSO765G0218 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 56.2 71 38.0
QL02p073935 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-06 56.2 59 44.1
Atru.chr8.612 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 55.8 67 37.3
Aqoxy2G00968 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-06 55.8 67 31.3
ClCG10G005890 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.9e-06 55.8 75 37.3
MBI16_g05778_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.9e-06 55.8 74 35.1
PSO063G3902 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 55.8 73 35.6
Atru.chr8.961 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 55.5 67 40.3
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-06 55.5 57 40.4
CSS0022596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-06 55.5 68 39.7
CSS0035444 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-06 55.5 68 39.7
CSS0035702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-06 55.5 68 39.7
CSS0048351 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-06 55.5 68 39.7
PSO063G5867 Papaver somniferum HOM05D000003 ORTHO05D000004 2.5e-06 55.5 72 34.7
PSO675G3943 Papaver somniferum HOM05D000003 ORTHO05D000004 2.5e-06 55.5 73 28.8
Sopen11g018420 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 55.5 81 29.6
Atru.chr2.1227 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.1 67 38.8
Atru.chr3.1819 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.1 67 32.8
Atru.chr6.1051 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.1 67 35.8
ECA240G4032 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-06 55.1 67 32.8
MBI06_g21005_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.3e-06 55.1 72 31.9
PSO782G0970 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-06 55.1 68 36.8
Duzib168G0449 Durio zibethinus HOM05D000003 ORTHO05D000004 4.3e-06 54.7 68 41.2
ECA240G3834 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.3e-06 54.7 67 40.3
PSO832G1257 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-06 54.7 64 40.6
Atru.chr3.2347 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 54.3 69 33.3
Atru.chr4.2622 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 54.3 70 32.9
Aqoxy2G02685 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.6e-06 54.3 68 33.8
CSS0011611 Camellia sinensis var. sinensis HOM05D002853 ORTHO05D003030 5.6e-06 54.3 74 32.4
Atru.chr1.2043 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-06 53.9 69 37.7
Atru.chr7.700 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-06 53.9 67 37.3
PSO063G0527 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-06 53.9 75 26.7
PSO135G1024 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-06 53.9 71 36.6
PSO801G0023 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-06 53.9 71 35.2
PGSC0003DMG400033900 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.3e-06 53.9 73 34.2
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 67 32.8
Atru.chr2.1221 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 77 33.8
CSS0033917 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-06 53.5 74 36.5
CSS0043775 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-06 53.5 74 36.5
MBI15_g00074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.5e-06 53.5 73 34.2
PSO063G7028 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 53.5 75 36.0


User provided reference genes

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