Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 7.5e-59 230.3 118 100.0
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 2.0e-35 152.5 91 87.9
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.8e-35 151.0 85 91.8
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-32 141.0 121 58.7
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.8e-32 140.6 121 58.7
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-30 135.6 121 56.2
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.3e-30 134.8 80 87.5
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.6e-30 134.4 115 58.3
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-29 133.3 107 60.7
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-29 131.3 119 58.0
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 4.4e-27 124.8 121 54.5
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.4e-26 120.6 182 42.3
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.4e-26 120.6 151 46.4
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.0e-23 113.6 167 44.9
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-23 112.5 152 42.8
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.6e-22 107.8 115 47.8
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-20 103.2 119 44.5
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 4.0e-20 101.7 197 36.5
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.0e-20 101.7 101 52.5
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-19 100.1 63 84.1
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-19 99.0 95 54.7
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 4.5e-19 98.2 94 56.4
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.5e-19 98.2 152 38.8
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-19 98.2 112 44.6
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 5.8e-19 97.8 92 56.5
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-18 95.9 94 54.3
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-18 94.7 69 65.2
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-17 92.4 105 45.7
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.2e-17 92.0 78 60.3
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 5.4e-17 91.3 92 54.3
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-17 90.9 69 63.8
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-16 90.1 116 44.0
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.7e-16 89.0 87 54.0
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.5e-16 88.6 87 54.0
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.5e-16 88.6 109 46.8
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-16 88.6 73 67.1
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.6e-16 88.2 129 38.8
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-16 87.8 99 45.5
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-16 87.8 65 63.1
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 7.9e-16 87.4 87 56.3
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 1.0e-15 87.0 132 41.7
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-15 87.0 80 55.0
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-15 86.7 68 60.3
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-15 86.3 83 50.6
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-15 85.5 99 45.5
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 3.9e-15 85.1 92 52.2
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 3.9e-15 85.1 67 59.7
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-15 84.3 65 60.0
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.1e-14 83.6 63 63.5
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-14 82.4 76 53.9
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-14 82.4 65 60.0
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-14 82.0 87 48.3
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.3e-14 81.6 66 59.1
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.6e-14 81.3 69 59.4
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 7.4e-14 80.9 102 45.1
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.6e-14 80.5 94 45.7
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.3e-13 80.1 69 59.4
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-13 80.1 51 74.5
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-13 80.1 59 67.8
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-13 79.7 61 60.7
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.1e-13 79.3 110 44.5
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-13 78.6 82 48.8
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.2e-13 77.8 66 57.6
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-12 76.6 86 48.8
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-12 76.6 61 57.4
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-12 76.3 57 61.4
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 3.1e-12 75.5 60 58.3
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.2e-11 73.6 158 33.5
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-11 73.2 94 45.7
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-11 72.8 64 56.2
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-11 70.5 52 67.3
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 3.8e-10 68.6 78 46.2
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.9e-10 68.2 82 41.5
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.9e-10 68.2 53 60.4
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 4.9e-10 68.2 53 60.4
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 8.4e-10 67.4 81 43.2
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-09 66.6 81 43.2
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-09 66.6 81 43.2
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.9e-09 66.2 85 40.0
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-09 65.5 63 52.4
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.2e-09 65.1 85 40.0
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 7.1e-09 64.3 116 34.5
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-08 63.5 46 63.0
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 1.6e-08 63.2 120 32.5
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.7e-08 62.4 89 37.1
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.5e-08 62.0 67 43.3
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.5e-08 62.0 60 51.7
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.6e-08 61.6 85 38.8
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 7.9e-08 60.8 37 70.3
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.0e-07 60.5 85 38.8
Sc17g0002940 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.0e-07 60.5 67 44.8
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 1.0e-07 60.5 36 72.2
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.8e-07 59.7 81 39.5
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 3.0e-07 58.9 37 64.9
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 3.0e-07 58.9 32 75.0
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.9e-07 58.5 37 70.3
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.1e-06 57.0 74 41.9
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.1e-06 57.0 85 37.6
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.5e-06 56.6 89 37.1
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.5e-06 56.6 67 38.8
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-06 56.6 63 47.6
Sc12g0008070 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.9e-06 56.2 64 40.6
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 3.3e-06 55.5 66 42.4
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 3.3e-06 55.5 74 40.5
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.3e-06 55.5 70 47.1
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-06 55.1 66 40.9
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-06 55.1 66 40.9
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 5.6e-06 54.7 66 40.9
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 5.6e-06 54.7 66 40.9
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 5.6e-06 54.7 66 40.9
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 5.6e-06 54.7 66 40.9
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 5.6e-06 54.7 46 58.7
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.6e-06 54.7 70 42.9
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-06 53.9 66 40.9
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-06 53.9 66 40.9
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-06 53.9 66 40.9
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 9.6e-06 53.9 66 40.9


User provided reference genes

Program Settings