Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g016950 Solanum pennellii HOM05D025921 ORTHO05D000009 3.9e-72 274.6 131 100.0
Sopen10g027850 Solanum pennellii HOM05D000030 ORTHO05D000009 7.4e-23 110.9 264 31.1
Sopen06g019730 Solanum pennellii HOM05D011551 ORTHO05D020269 2.5e-18 95.9 75 61.3
Sopen09g021040 Solanum pennellii HOM05D000030 ORTHO05D000009 5.5e-18 94.7 74 60.8
Sopen05g024130 Solanum pennellii HOM05D000030 ORTHO05D000009 1.2e-17 93.6 75 58.7
Sopen01g009540 Solanum pennellii HOM05D000030 ORTHO05D000009 1.6e-17 93.2 75 57.3
Sopen07g023560 Solanum pennellii HOM05D000030 ORTHO05D000031 4.6e-17 91.7 75 58.7
Sopen04g012510 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-16 89.7 75 58.7
Sopen10g025210 Solanum pennellii HOM05D000030 ORTHO05D000031 5.1e-16 88.2 75 56.0
Sopen09g023850 Solanum pennellii HOM05D000030 ORTHO05D000031 8.7e-16 87.4 81 53.1
Sopen08g010530 Solanum pennellii HOM05D000030 ORTHO05D000009 1.5e-15 86.7 71 59.2
Sopen01g023710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-15 85.5 75 56.0
Sopen03g010040 Solanum pennellii HOM05D000004 ORTHO05D000009 3.3e-15 85.5 75 56.0
Sopen04g012480 Solanum pennellii HOM05D000004 ORTHO05D000034 5.7e-15 84.7 75 53.3
Sopen04g020920 Solanum pennellii HOM05D000030 ORTHO05D000009 7.4e-15 84.3 75 56.0
Solyc10g150142.1 Solanum lycopersicum HOM05D000030 ORTHO05D000031 4.8e-14 81.6 50 74.0
Solyc12g150122.1 Solanum lycopersicum HOM05D000030 ORTHO05D000031 2.4e-13 79.3 50 72.0
CAN.G170.129 Capsicum annuum HOM05D000030 ORTHO05D000031 3.8e-11 72.0 78 47.4
Hma1.2p1_0336F.1_g129040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.2e-10 68.9 78 46.2
Sopen09g006980 Solanum pennellii HOM05D000030 ORTHO05D000009 4.2e-10 68.6 80 41.2
Sopen12g008620 Solanum pennellii HOM05D004699 ORTHO05D005668 4.2e-10 68.6 80 41.2
Sopen05g011530 Solanum pennellii HOM05D000030 ORTHO05D000031 5.5e-10 68.2 80 41.2
Sopen05g013220 Solanum pennellii HOM05D000030 ORTHO05D000031 5.5e-10 68.2 80 41.2
Sopen05g021350 Solanum pennellii HOM05D000030 ORTHO05D000009 5.5e-10 68.2 80 41.2
Sopen07g010210 Solanum pennellii HOM05D000030 ORTHO05D000031 5.5e-10 68.2 80 41.2
Sopen07g015380 Solanum pennellii HOM05D000030 ORTHO05D000009 5.5e-10 68.2 80 41.2
Sopen09g010780 Solanum pennellii HOM05D000030 ORTHO05D000031 5.5e-10 68.2 80 41.2
Sopen11g023980 Solanum pennellii HOM05D000047 ORTHO05D000589 5.5e-10 68.2 80 41.2
Sopen12g011030 Solanum pennellii HOM05D000030 ORTHO05D000009 5.5e-10 68.2 80 41.2
Sopen12g025130 Solanum pennellii HOM05D000030 ORTHO05D000031 7.2e-10 67.8 65 52.3
Sopen08g011550 Solanum pennellii HOM05D000030 ORTHO05D000031 1.2e-09 67.0 80 40.0
Hma1.2p1_0180F.1_g079730 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.1e-09 64.7 81 42.0
Solyc03g058343.1 Solanum lycopersicum HOM05D000030 ORTHO05D000031 3.9e-08 62.0 48 54.2
PGSC0003DMG400017490 Solanum tuberosum HOM05D000030 ORTHO05D000031 3.9e-08 62.0 48 52.1
FvH4_3g04521 Fragaria vesca HOM05D000030 ORTHO05D000031 5.1e-08 61.6 110 32.7
Hma1.2p1_2681F.1_g326860 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.1e-08 61.6 74 44.6
Hma1.2p1_0572F.1_g181290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.7e-08 61.2 73 43.8
Hma1.2p1_0705F.1_g206900 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.7e-08 60.8 78 44.9
Sopen01g026580 Solanum pennellii HOM05D000030 ORTHO05D000031 1.1e-07 60.5 36 63.9
Hma1.2p1_0348F.1_g131940 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.5e-07 60.1 77 40.3
Sopen12g008650 Solanum pennellii HOM05D000014 ORTHO05D000031 1.5e-07 60.1 80 38.8
Hma1.2p1_0851F.1_g228210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.9e-07 59.7 76 40.8
AUR62021561 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.5e-07 59.3 90 36.7
Sopen11g010320 Solanum pennellii HOM05D000030 ORTHO05D000009 2.5e-07 59.3 36 63.9
PGSC0003DMG400016410 Solanum tuberosum HOM05D000030 ORTHO05D000009 3.3e-07 58.9 47 59.6
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 4.3e-07 58.5 49 49.0
Sopen05g020330 Solanum pennellii HOM05D000030 ORTHO05D000009 5.7e-07 58.2 80 36.2
Atru.chr11.670 Acer truncatum HOM05D000030 ORTHO05D000031 7.4e-07 57.8 51 45.1
CARHR154720 Cardamine hirsuta HOM05D000030 ORTHO05D000031 9.7e-07 57.4 74 36.5
Hma1.2p1_1553F.1_g290280 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.7e-07 57.4 79 41.8
Nitab4.5_0006608g0020 Nicotiana tabacum HOM05D025921 ORTHO05D013890 9.7e-07 57.4 65 47.7
Manes.14G168233 Manihot esculenta HOM05D000030 ORTHO05D000009 1.3e-06 57.0 49 49.0
QL10p045275 Quercus lobata HOM05D000030 ORTHO05D000009 1.6e-06 56.6 56 35.7
Sopen07g007410 Solanum pennellii HOM05D000030 ORTHO05D000009 1.6e-06 56.6 45 60.0
Atru.chr10.691 Acer truncatum HOM05D000030 ORTHO05D000009 2.2e-06 56.2 51 43.1
COL.COLO4_28700 Corchorus olitorius HOM05D033024 ORTHO05D000031 2.2e-06 56.2 77 35.1
Hma1.2p1_0247F.1_g101920 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.2e-06 56.2 79 41.8
Manes.02G217650 Manihot esculenta HOM05D000030 ORTHO05D000009 2.2e-06 56.2 49 44.9
Manes.17G003183 Manihot esculenta HOM05D000030 ORTHO05D000009 2.2e-06 56.2 121 30.6
Sopen11g012600 Solanum pennellii HOM05D000030 ORTHO05D000009 2.2e-06 56.2 77 36.4
AUR62020184 Chenopodium quinoa HOM05D000058 ORTHO05D000009 2.8e-06 55.8 77 33.8
AUR62040936 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.8e-06 55.8 77 33.8
Manes.16G014950 Manihot esculenta HOM05D000030 ORTHO05D000009 2.8e-06 55.8 47 46.8
Manes.18G145766 Manihot esculenta HOM05D000030 ORTHO05D000009 2.8e-06 55.8 49 46.9
QL06p035328 Quercus lobata HOM05D000030 ORTHO05D000009 3.7e-06 55.5 56 35.7
QL12p026216 Quercus lobata HOM05D000030 ORTHO05D000009 3.7e-06 55.5 56 35.7
Rhsim08G0113700 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.7e-06 55.5 48 47.9
Atru.chr1.2878 Acer truncatum HOM05D000030 ORTHO05D000009 4.8e-06 55.1 51 43.1
AUR62013757 Chenopodium quinoa HOM05D000030 ORTHO05D000031 4.8e-06 55.1 138 31.2
Gorai.008G186400 Gossypium raimondii HOM05D000030 ORTHO05D000009 4.8e-06 55.1 51 45.1
Manes.13G077247 Manihot esculenta HOM05D000030 ORTHO05D000009 4.8e-06 55.1 77 36.4
Sopen01g017090 Solanum pennellii HOM05D000030 ORTHO05D000009 4.8e-06 55.1 61 42.6
PGSC0003DMG400040321 Solanum tuberosum HOM05D000030 ORTHO05D000031 4.8e-06 55.1 47 46.8
Ah.09g227790 Amaranthus hybridus HOM05D000030 ORTHO05D000031 6.3e-06 54.7 59 35.6
AUR62013479 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.3e-06 54.7 47 42.6
Hma1.2p1_0536F.1_g174140 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.3e-06 54.7 47 46.8
Nitab4.5_0004608g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 6.3e-06 54.7 65 40.0
Sopen01g026300 Solanum pennellii HOM05D000030 ORTHO05D000009 6.3e-06 54.7 52 44.2
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 6.3e-06 54.7 52 44.2
Sopen08g019750 Solanum pennellii HOM05D000030 ORTHO05D000009 6.3e-06 54.7 45 57.8
Sopen12g008930 Solanum pennellii HOM05D000030 ORTHO05D000009 6.3e-06 54.7 52 44.2
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 6.3e-06 54.7 52 44.2
Atru.chr4.1208 Acer truncatum HOM05D000030 ORTHO05D000009 8.2e-06 54.3 42 50.0
EL10Ac9g22824 Beta vulgaris HOM05D000030 ORTHO05D000009 8.2e-06 54.3 47 42.6
DCAR_001611 Daucus carota HOM05D011551 ORTHO05D000009 8.2e-06 54.3 48 47.9
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 8.2e-06 54.3 65 41.5
Manes.08G092411 Manihot esculenta HOM05D000030 ORTHO05D000009 8.2e-06 54.3 55 38.2
Manes.13G091744 Manihot esculenta HOM05D000030 ORTHO05D000009 8.2e-06 54.3 51 43.1


User provided reference genes

Program Settings