Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g016580 Solanum pennellii HOM05D000963 ORTHO05D010073 7.0e-78 293.9 149 100.0
Lsat_1_v5_gn_0_47661 Lactuca sativa HOM05D000963 ORTHO05D010073 5.9e-61 237.7 146 80.1
Lsat_1_v5_gn_2_97101 Lactuca sativa HOM05D000963 ORTHO05D010073 5.9e-61 237.7 146 80.1
Lsat_1_v5_gn_6_94240 Lactuca sativa HOM05D000963 ORTHO05D010073 5.9e-61 237.7 146 80.1
Lsat_1_v5_gn_8_139860 Lactuca sativa HOM05D000963 ORTHO05D010073 5.9e-61 237.7 146 80.1
Sc21g0003830 Simmondsia chinensis HOM05D000963 ORTHO05D013492 7.8e-61 237.3 141 82.3
arahy.Tifrunner.gnm1.ann1.3JL12K Arachis hypogaea HOM05D000963 ORTHO05D010073 9.5e-59 230.3 146 78.8
arahy.Tifrunner.gnm1.ann1.9ZA4TL Arachis hypogaea HOM05D000963 ORTHO05D010073 9.5e-59 230.3 146 78.8
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 9.5e-59 230.3 146 78.8
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 9.5e-59 230.3 146 78.8
arahy.Tifrunner.gnm1.ann1.MCAP06 Arachis hypogaea HOM05D000963 ORTHO05D010073 9.5e-59 230.3 146 78.8
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 9.5e-59 230.3 146 78.8
arahy.Tifrunner.gnm1.ann1.BP3EV9 Arachis hypogaea HOM05D000963 ORTHO05D010073 6.1e-58 227.6 146 77.4
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 3.0e-52 208.8 145 75.2
Actinidia28233 Actinidia chinensis HOM05D000963 ORTHO05D010073 9.8e-48 193.7 93 92.5
Sopen05g013060 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-46 189.1 96 89.6
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 1.7e-44 183.0 84 94.0
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 8.6e-44 180.6 151 65.6
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 1.9e-43 179.5 146 65.8
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 1.9e-43 179.5 146 65.8
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 1.9e-43 179.5 146 65.8
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 5.6e-43 177.9 146 65.1
FAN01G1778 Fragaria x ananassa HOM05D000963 ORTHO05D010073 1.2e-42 176.8 93 84.9
Oeu029257.1 Olea europaea HOM05D000963 ORTHO05D010073 4.4e-40 168.3 141 63.8
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-38 163.7 146 62.3
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 1.9e-38 162.9 146 61.0
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 1.9e-38 162.9 146 61.0
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 3.2e-38 162.2 151 58.9
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 3.5e-37 158.7 72 94.4
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 3.0e-36 155.6 146 59.6
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 3.0e-36 155.6 146 59.6
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.5e-35 152.5 71 93.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.5e-35 152.5 71 93.0
arahy.Tifrunner.gnm1.ann1.L8KA6F Arachis hypogaea HOM05D000963 ORTHO05D010073 3.3e-35 152.1 83 80.7
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 7.3e-35 151.0 146 58.2
FAN20G2381 Fragaria x ananassa HOM05D000963 ORTHO05D010073 3.6e-34 148.7 74 87.8
FAN06G1734 Fragaria x ananassa HOM05D000963 ORTHO05D010073 3.1e-33 145.6 70 90.0
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 3.8e-31 138.7 72 83.3
ClCG04G002950 Citrullus lanatus HOM05D000963 ORTHO05D010073 8.4e-31 137.5 67 89.6
Psat3g011600 Pisum sativum HOM05D000963 ORTHO05D010073 3.2e-30 135.6 69 82.6
Nitab4.5_0007400g0110 Nicotiana tabacum HOM05D000963 ORTHO05D010073 1.2e-29 133.7 72 83.3
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 3.9e-28 128.6 130 56.9
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.6e-28 127.9 146 50.7
SEGI_18787 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 1.1e-25 120.6 73 79.5
Sc09g0006440 Simmondsia chinensis HOM05D000963 ORTHO05D010073 1.7e-23 113.2 56 89.3
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 8.4e-23 110.9 132 53.0
Phvul.008G179700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 1.9e-19 99.8 44 97.7
Nitab4.5_0006727g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010073 5.6e-19 98.2 51 84.3
arahy.Tifrunner.gnm1.ann1.RD3GDK Arachis hypogaea HOM05D000963 ORTHO05D010073 7.6e-16 87.8 45 86.7
Nitab4.5_0004841g0040 Nicotiana tabacum HOM05D014741 ORTHO05D011787 7.1e-14 81.3 39 87.2
arahy.Tifrunner.gnm1.ann1.FXQ5AB Arachis hypogaea HOM05D000963 ORTHO05D010073 3.9e-12 75.5 43 83.7
CSS0020252 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D013225 1.5e-11 73.6 39 87.2
TPR.G36687 Trifolium pratense HOM05D000963 ORTHO05D010073 7.4e-11 71.2 43 74.4
VMungo1024G0003 Vigna mungo HOM05D009256 ORTHO05D011704 6.2e-10 68.2 78 48.7
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 8.1e-10 67.8 52 71.2
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 8.1e-10 67.8 52 71.2
Gorai.011G264900 Gossypium raimondii HOM05D000963 ORTHO05D010073 8.1e-10 67.8 32 87.5
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 8.1e-10 67.8 52 71.2
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 8.1e-10 67.8 39 74.4
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 8.1e-10 67.8 52 71.2
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 8.1e-10 67.8 52 71.2
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 8.1e-10 67.8 52 71.2
Oeu010687.1 Olea europaea HOM05D000963 ORTHO05D010073 1.4e-09 67.0 52 61.5
Gohir.1Z056500 Gossypium hirsutum HOM05D000963 ORTHO05D010073 2.4e-09 66.2 52 69.2
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 2.4e-09 66.2 50 72.0
SEGI_23954 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.0e-09 65.5 146 41.8
EL10Ac4g08799 Beta vulgaris HOM05D000963 ORTHO05D010073 5.3e-09 65.1 52 67.3
SEGI_06644 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 6.9e-09 64.7 146 42.5
SEGI_13999 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 6.9e-09 64.7 146 42.5
SEGI_16475 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 6.9e-09 64.7 146 42.5
BNapus_Darmor_BZH_scaffold_234p00110 Brassica napus HOM05D009256 ORTHO05D011704 4.5e-08 62.0 100 45.0
BraSC77t46657Z Brassica rapa HOM05D009256 ORTHO05D011704 4.5e-08 62.0 100 45.0
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 9.9e-08 60.8 50 66.0
SEGI_38700 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 9.9e-08 60.8 120 44.2
arahy.Tifrunner.gnm1.ann1.EF1F4B Arachis hypogaea HOM05D000963 ORTHO05D010073 1.3e-07 60.5 102 44.1
FAN08G1097 Fragaria x ananassa HOM05D009256 ORTHO05D011704 1.7e-07 60.1 74 50.0
Gorai.007G326100 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.7e-07 60.1 52 65.4
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 4.9e-07 58.5 52 61.5
Hma1.2p1_0431F.1_g151580 Hydrangea macrophylla HOM05D000963 ORTHO05D010073 6.4e-07 58.2 52 63.5
Lj5C62G3 Lonicera japonica HOM05D003101 ORTHO05D003550 8.4e-07 57.8 29 93.1
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 8.4e-07 57.8 52 63.5
SGA_v2.0_scaffold222G42797 Striga asiatica HOM05D000963 ORTHO05D010073 1.1e-06 57.4 44 70.5
Gorai.009G238500 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.4e-06 57.0 52 61.5
Gohir.D04G096660 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.9e-06 56.6 52 59.6
arahy.Tifrunner.gnm1.ann1.Q2LPLX Arachis hypogaea HOM05D009256 ORTHO05D011704 3.2e-06 55.8 74 48.6
arahy.Tifrunner.gnm1.ann1.QZF0BL Arachis hypogaea HOM05D009256 ORTHO05D011704 3.2e-06 55.8 74 48.6
arahy.Tifrunner.gnm1.ann1.V5LEJ9 Arachis hypogaea HOM05D009256 ORTHO05D011704 3.2e-06 55.8 74 48.6
arahy.Tifrunner.gnm1.ann1.WH3GKX Arachis hypogaea HOM05D009256 ORTHO05D011704 3.2e-06 55.8 74 48.6
SEGI_01254 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 3.2e-06 55.8 52 59.6
TPR.G11370 Trifolium pratense HOM05D009256 ORTHO05D011704 3.2e-06 55.8 74 48.6
TAR629G1300 Trochodendron aralioides HOM05D009256 ORTHO05D011704 3.2e-06 55.8 74 48.6
Dinv13700 Davidia involucrata HOM05D000001 ORTHO05D000003 7.1e-06 54.7 53 52.8


User provided reference genes

Program Settings