Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g016560 Solanum pennellii HOM05D000963 ORTHO05D005131 8.6e-57 223.4 110 100.0
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 1.2e-39 166.4 179 54.7
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.2e-37 159.8 97 83.5
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 2.0e-37 159.1 95 87.4
MBI08_g48228_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 2.6e-37 158.7 85 92.9
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 7.5e-37 157.1 84 91.7
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.9e-36 154.5 97 80.4
arahy.Tifrunner.gnm1.ann1.JE53Y0 Arachis hypogaea HOM05D000963 ORTHO05D005131 3.2e-35 151.8 85 89.4
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 7.0e-35 150.6 84 86.9
HPP92_028387 Vanilla planifolia HOM05D000963 ORTHO05D005131 9.2e-35 150.2 85 88.2
arahy.Tifrunner.gnm1.ann1.LWFR1C Arachis hypogaea HOM05D000963 ORTHO05D005131 7.8e-34 147.1 85 87.1
SHI36890 Sapria himalayana HOM05D000963 ORTHO05D005131 8.6e-33 143.7 180 50.0
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.9e-32 142.5 75 92.0
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 2.5e-32 142.1 182 47.8
Migut.D01497 Erythranthe guttata HOM05D000963 ORTHO05D005131 6.2e-31 137.5 76 92.1
Nitab4.5_0004533g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.2e-29 133.3 79 82.3
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 1.2e-29 133.3 72 87.5
arahy.Tifrunner.gnm1.ann1.J9XL5M Arachis hypogaea HOM05D000963 ORTHO05D005131 1.3e-25 119.8 65 87.7
arahy.Tifrunner.gnm1.ann1.D10MHU Arachis hypogaea HOM05D000963 ORTHO05D005131 1.2e-23 113.2 60 88.3
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 5.2e-22 107.8 57 87.7
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.3e-20 103.2 67 80.6
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 1.6e-18 96.3 116 49.1
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 1.6e-18 96.3 116 49.1
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 1.6e-18 96.3 116 49.1
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 1.6e-18 96.3 116 49.1
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 1.6e-18 96.3 116 49.1
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 1.6e-18 96.3 116 49.1
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 1.7e-17 92.8 119 46.2
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 6.4e-12 74.3 38 89.5
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 6.4e-12 74.3 38 89.5
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.4e-12 74.3 38 89.5
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.4e-12 74.3 38 89.5
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 6.4e-12 74.3 38 89.5
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.4e-12 74.3 38 89.5
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.4e-12 74.3 38 89.5
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.4e-12 74.3 38 89.5
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 6.4e-12 74.3 38 89.5
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 6.4e-12 74.3 38 89.5
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 5.4e-11 71.2 38 86.8
arahy.Tifrunner.gnm1.ann1.G70FPN Arachis hypogaea HOM05D000963 ORTHO05D005131 2.7e-10 68.9 87 52.9
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.8e-10 67.4 38 84.2
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 2.3e-09 65.9 65 56.9
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.0e-09 65.5 38 78.9
TPR.G33662 Trifolium pratense HOM05D004957 ORTHO05D006741 6.6e-09 64.3 35 82.9
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 4.3e-08 61.6 32 90.6
SEGI_14910 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 2.8e-07 58.9 141 35.5
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.1e-06 57.0 38 68.4
EL10As15g24101 Beta vulgaris HOM05D014900 ORTHO05D018510 1.4e-06 56.6 35 74.3
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 2.4e-06 55.8 38 73.7
Lsat_1_v5_gn_4_99780 Lactuca sativa HOM05D000103 ORTHO05D000049 4.0e-06 55.1 24 100.0
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 4.0e-06 55.1 67 49.3
BraSC59t46511Z Brassica rapa HOM05D000963 ORTHO05D005131 5.3e-06 54.7 52 59.6
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 9.0e-06 53.9 67 47.8


User provided reference genes

Program Settings