Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 3.1e-67 258.5 141 100.0
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.3e-62 243.0 141 96.5
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 3.9e-62 241.5 141 95.7
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 8.7e-54 213.8 141 84.4
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.9e-41 171.4 113 79.6
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.4e-40 169.9 113 77.9
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.2e-40 168.7 114 78.9
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.2e-40 168.7 113 77.9
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 4.2e-40 168.3 124 72.6
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 5.5e-40 167.9 122 73.8
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 9.3e-40 167.2 117 75.2
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 9.3e-40 167.2 124 74.2
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.2e-39 166.8 121 74.4
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.6e-39 166.4 122 73.0
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 2.7e-39 165.6 119 74.8
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 3.5e-39 165.2 114 76.3
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.3e-38 163.3 133 71.4
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.3e-38 163.3 131 66.4
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.3e-38 163.3 131 66.4
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.3e-38 163.3 122 73.0
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.3e-38 163.3 138 68.1
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.8e-38 162.9 111 76.6
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.8e-38 162.9 117 75.2
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 1.8e-38 162.9 123 73.2
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.8e-38 162.9 114 75.4
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 2.3e-38 162.5 121 72.7
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 3.0e-38 162.2 114 75.4
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 3.0e-38 162.2 114 76.3
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 3.9e-38 161.8 111 77.5
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 3.9e-38 161.8 123 72.4
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 5.1e-38 161.4 118 74.6
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 5.1e-38 161.4 114 76.3
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 6.7e-38 161.0 122 73.0
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 6.7e-38 161.0 121 69.4
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 6.7e-38 161.0 124 68.5
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 6.7e-38 161.0 113 74.3
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 1.5e-37 159.8 118 72.0
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.5e-37 159.8 114 75.4
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.5e-37 159.8 114 75.4
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.5e-37 159.8 111 76.6
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 1.9e-37 159.5 120 70.0
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 1.9e-37 159.5 120 73.3
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 2.5e-37 159.1 118 73.7
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 2.5e-37 159.1 118 72.0
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 2.5e-37 159.1 134 65.7
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 3.3e-37 158.7 110 75.5
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 5.7e-37 157.9 113 75.2
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 7.4e-37 157.5 118 70.3
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 9.6e-37 157.1 120 71.7
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 9.6e-37 157.1 113 74.3
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 9.6e-37 157.1 113 74.3
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 9.6e-37 157.1 113 75.2
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.3e-36 156.8 114 74.6
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 1.3e-36 156.8 114 71.9
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.6e-36 156.4 120 71.7
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.6e-36 156.4 120 71.7
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.6e-36 156.4 107 75.7
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 1.6e-36 156.4 110 74.5
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 2.1e-36 156.0 113 74.3
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 2.1e-36 156.0 113 74.3
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 2.8e-36 155.6 118 71.2
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 2.8e-36 155.6 118 71.2
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 2.8e-36 155.6 118 71.2
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 3.7e-36 155.2 122 70.5
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 3.7e-36 155.2 120 67.5
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 3.7e-36 155.2 113 74.3
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 3.7e-36 155.2 113 72.6
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 4.8e-36 154.8 102 80.4
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 4.8e-36 154.8 102 78.4
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 6.3e-36 154.5 113 72.6
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 8.2e-36 154.1 135 64.4
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 8.2e-36 154.1 135 64.4
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 2.4e-35 152.5 124 66.9
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 3.1e-35 152.1 113 70.8
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.3e-35 151.4 100 78.0
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 5.3e-35 151.4 118 69.5
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 5.3e-35 151.4 118 69.5
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.2e-34 150.2 121 68.6
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.0e-34 149.4 108 76.9
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 2.0e-34 149.4 114 71.1
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 2.6e-34 149.1 116 72.4
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 3.4e-34 148.7 116 69.8
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 4.5e-34 148.3 95 83.2
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 2.2e-33 146.0 116 67.2
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 1.9e-32 142.9 126 61.9
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 7.2e-32 141.0 114 66.7
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 9.3e-32 140.6 119 63.0
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 6.1e-31 137.9 127 62.2
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 8.7e-30 134.0 115 62.6
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 9.7e-29 130.6 114 64.0
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 2.2e-28 129.4 113 58.4
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.1e-27 127.1 135 58.5
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 1.4e-27 126.7 102 64.7
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.2e-26 123.6 103 68.0
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 2.6e-26 122.5 111 61.3
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 5.9e-26 121.3 105 67.6
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.0e-25 120.6 133 57.1
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 7.9e-23 110.9 82 70.7
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 1.4e-22 110.2 115 57.4
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.7e-20 103.2 100 59.0
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 1.0e-17 94.0 106 56.6
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 1.4e-16 90.1 73 67.1
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 3.6e-15 85.5 114 43.0
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 6.1e-15 84.7 111 41.4
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 8.8e-14 80.9 103 45.6
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 3.3e-13 79.0 73 57.5
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 2.8e-12 75.9 51 78.4
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 2.7e-07 59.3 51 60.8
SMO290G0010 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 4.7e-07 58.5 121 34.7
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 3.0e-06 55.8 44 61.4


User provided reference genes

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