Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 5.0e-168 594.3 299 100.0
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 3.0e-165 585.1 299 98.3
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 2.8e-163 578.6 299 96.7
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 2.0e-148 529.3 303 88.4
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 9.8e-148 526.9 301 88.0
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 1.6e-129 466.5 286 83.2
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.9e-127 459.5 303 79.5
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 4.4e-124 448.4 282 78.4
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.1e-122 443.7 293 77.8
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 1.0e-120 437.2 296 76.0
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 2.5e-119 432.6 267 79.8
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 5.6e-119 431.4 270 78.9
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 2.8e-118 429.1 265 80.0
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 8.1e-118 427.6 292 74.0
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.4e-117 426.8 277 76.5
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.8e-117 426.4 302 70.9
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.1e-117 425.6 267 78.3
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 2.0e-116 422.9 294 73.1
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 7.6e-116 421.0 260 79.6
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 3.8e-115 418.7 276 75.7
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 4.9e-115 418.3 270 75.2
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.1e-114 417.2 259 79.2
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 1.4e-114 416.8 299 69.9
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 1.9e-114 416.4 256 78.5
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.4e-114 416.0 276 75.4
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 3.2e-114 415.6 295 71.2
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 5.4e-114 414.8 297 70.7
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 7.1e-114 414.5 268 76.9
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 9.3e-114 414.1 272 73.9
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.2e-113 413.7 265 74.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.6e-113 413.3 285 73.0
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 4.6e-113 411.8 267 76.0
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.0e-112 410.6 246 80.5
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 2.3e-112 409.5 318 67.6
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 6.7e-112 407.9 266 75.2
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 1.1e-111 407.1 285 71.9
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.9e-111 406.4 253 78.3
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 2.5e-111 406.0 266 74.1
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 1.3e-110 403.7 254 77.2
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 2.1e-110 402.9 266 75.2
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 3.7e-110 402.1 282 69.5
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 3.7e-110 402.1 270 74.4
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 3.7e-110 402.1 270 74.4
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 6.2e-110 401.4 277 72.9
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.1e-109 400.6 267 74.9
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 4.0e-109 398.7 256 75.0
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 5.3e-109 398.3 274 73.0
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 5.3e-109 398.3 274 73.0
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 5.3e-109 398.3 274 73.0
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 5.3e-109 398.3 243 79.8
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 5.3e-109 398.3 243 79.8
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 9.0e-109 397.5 245 78.8
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.5e-108 396.7 264 74.6
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.5e-108 396.7 268 72.8
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 4.5e-108 395.2 250 74.4
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 5.8e-108 394.8 268 73.5
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 1.3e-107 393.7 299 66.9
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 2.9e-107 392.5 243 77.0
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.1e-106 390.6 267 73.0
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 2.4e-106 389.4 264 74.2
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 1.6e-105 386.7 267 72.7
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 7.9e-105 384.4 269 71.0
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 5.6e-103 378.3 266 72.6
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 3.7e-102 375.6 227 79.7
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 9.0e-101 370.9 343 57.4
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.5e-100 370.2 244 75.0
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.9e-99 365.2 261 71.3
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 2.1e-97 359.8 252 71.4
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 2.7e-97 359.4 221 78.7
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 3.3e-95 352.4 218 78.0
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 3.7e-94 349.0 218 78.9
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 1.8e-93 346.7 245 71.8
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 4.1e-93 345.5 243 68.7
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 6.9e-93 344.7 238 73.1
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.0e-91 340.9 204 81.9
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 3.6e-89 332.4 223 74.0
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 3.0e-88 329.3 213 75.6
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 3.9e-88 328.9 218 73.4
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.3e-86 323.9 249 64.3
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 6.3e-86 321.6 203 76.4
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 4.1e-85 318.9 271 61.3
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 2.6e-84 316.2 191 78.5
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 7.7e-84 314.7 254 60.6
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 3.9e-80 302.4 257 61.1
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 8.8e-80 301.2 204 74.5
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 3.7e-78 295.8 237 64.1
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.6e-76 289.7 251 59.4
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.1e-74 284.3 251 56.2
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 3.2e-74 282.7 166 80.1
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 8.8e-72 274.6 234 62.0
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.1e-71 274.2 187 71.7
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.8e-70 269.6 207 65.7
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.6e-68 263.8 245 54.7
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 5.0e-67 258.8 185 68.6
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 6.1e-65 251.9 223 57.8
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.3e-62 244.2 180 65.6
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 1.7e-62 243.8 202 63.9
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.2e-59 233.4 251 51.4
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 7.7e-52 208.4 161 66.5
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 4.0e-48 196.1 245 46.1
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 9.8e-47 191.4 152 63.8
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.2e-33 147.9 92 76.1
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.8e-33 146.7 94 75.5
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 4.6e-28 129.4 107 58.9
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 2.6e-23 113.6 88 63.6
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.4e-23 113.2 98 53.1
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 3.2e-21 106.7 120 50.0
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-20 104.8 119 47.9
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 1.6e-20 104.4 62 82.3
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.9e-19 99.8 56 83.9
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 5.8e-15 85.9 98 45.9
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 2.9e-14 83.6 164 34.1
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 3.5e-12 76.6 51 76.5
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 5.1e-11 72.8 53 64.2
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 1.9e-10 70.9 41 68.3
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 5.3e-08 62.8 243 25.1
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 5.8e-07 59.3 54 55.6


User provided reference genes

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