Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 2.7e-255 884.8 441 100.0
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 3.1e-251 871.3 441 98.4
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 3.0e-246 854.7 441 96.8
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 3.5e-226 788.1 441 88.2
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 9.2e-219 763.5 441 86.4
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 8.9e-214 746.9 453 84.1
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 3.7e-175 618.6 443 71.1
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 5.3e-174 614.8 446 71.1
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 7.9e-170 600.9 445 70.3
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 2.4e-166 589.3 446 68.8
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 2.6e-165 585.9 446 69.1
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 1.7e-164 583.2 450 68.2
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 2.9e-164 582.4 446 68.2
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 2.9e-164 582.4 484 63.8
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 3.8e-164 582.0 447 66.2
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 3.2e-163 578.9 448 67.0
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 4.2e-163 578.6 448 67.9
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 5.1e-161 571.6 448 66.5
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 7.4e-160 567.8 443 69.1
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 7.4e-160 567.8 465 64.1
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 2.8e-159 565.8 445 65.2
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.4e-158 562.8 347 83.3
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 2.0e-157 559.7 452 65.7
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 7.7e-157 557.8 448 66.1
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.7e-156 556.6 446 64.6
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 2.2e-156 556.2 449 64.6
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 5.0e-156 555.1 445 63.8
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.6e-154 550.1 452 65.3
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.6e-154 550.1 448 64.5
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 3.6e-154 548.9 448 63.8
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 4.7e-154 548.5 451 65.4
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.8e-153 546.6 447 64.7
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 2.3e-153 546.2 448 66.1
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 3.0e-153 545.8 447 62.9
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 3.9e-153 545.4 448 63.2
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 3.9e-153 545.4 471 60.7
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.5e-152 543.5 446 65.7
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 1.5e-152 543.5 454 63.2
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 2.0e-152 543.1 452 64.2
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 3.3e-152 542.3 448 62.5
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 1.3e-151 540.4 450 64.7
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 3.7e-151 538.9 447 64.9
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 6.3e-151 538.1 448 62.9
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 4.1e-150 535.4 343 78.4
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 7.0e-150 534.6 447 63.1
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 1.2e-149 533.9 411 68.1
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 5.9e-149 531.6 447 64.4
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 6.5e-148 528.1 427 65.3
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.9e-147 526.6 339 78.2
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 7.2e-147 524.6 455 60.9
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 1.2e-146 523.9 444 62.8
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 2.7e-146 522.7 448 59.2
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 3.6e-146 522.3 444 61.0
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 4.7e-146 521.9 451 61.6
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 3.0e-145 519.2 447 61.1
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 6.7e-145 518.1 446 60.8
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 3.3e-144 515.8 339 77.6
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 1.3e-143 513.8 443 62.1
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 1.3e-143 513.8 446 62.8
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 1.3e-143 513.8 454 60.1
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.7e-143 513.5 443 61.9
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.7e-143 513.5 448 61.6
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.8e-143 512.7 449 61.9
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 2.0e-141 506.5 377 70.3
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 2.0e-141 506.5 452 60.4
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 7.7e-141 504.6 457 59.3
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 1.3e-140 503.8 451 60.5
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.7e-140 503.4 441 59.2
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 1.7e-140 503.4 469 59.7
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 1.9e-139 500.0 385 66.8
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.5e-139 499.6 442 57.9
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 3.2e-139 499.2 445 60.4
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 5.5e-139 498.4 441 58.5
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 2.1e-138 496.5 408 63.5
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.7e-138 496.1 382 66.8
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 3.6e-138 495.7 441 57.8
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 1.8e-137 493.4 451 58.5
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.6e-136 489.6 342 72.8
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 9.7e-136 487.6 442 57.5
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.8e-135 486.1 441 56.9
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 8.3e-135 484.6 459 59.0
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 8.3e-135 484.6 469 57.8
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.4e-134 483.8 333 73.3
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 1.6e-133 480.3 441 56.2
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 4.2e-131 472.2 466 54.5
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 7.2e-131 471.5 457 55.1
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 8.8e-129 464.5 454 57.0
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 1.2e-128 464.2 452 57.1
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 2.6e-128 463.0 495 52.1
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.2e-125 454.1 445 56.9
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.6e-125 453.8 400 62.5
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 2.6e-120 436.4 459 53.4
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 4.9e-119 432.2 343 66.8
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 1.6e-117 427.2 368 62.5
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 2.3e-116 423.3 298 71.1
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 2.5e-115 419.9 255 79.2
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 6.1e-114 415.2 474 48.5
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.0e-108 397.9 368 60.3
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.1e-105 387.9 398 55.5
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 4.0e-105 386.0 455 49.2
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.5e-104 381.7 253 73.1
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 2.2e-103 380.2 255 69.4
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 1.1e-102 377.9 373 55.0
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 9.5e-99 364.8 353 54.7
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.3e-97 360.1 281 65.5
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 5.2e-97 359.0 351 53.6
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 1.6e-93 347.4 343 52.8
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.1e-93 347.1 292 63.7
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 1.5e-91 340.9 372 48.4
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 8.9e-89 331.6 353 48.7
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 2.4e-86 323.6 253 62.1
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 1.2e-85 321.2 295 59.3
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 1.3e-79 301.2 486 40.7
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 4.6e-77 292.7 334 48.5
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.4e-65 253.8 444 40.5
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 6.2e-58 229.2 437 37.5
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.2e-55 220.7 216 61.6
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 2.4e-49 200.7 234 49.6
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.7e-45 187.2 260 41.5
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 1.0e-44 185.3 161 57.1
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.2e-40 171.8 289 39.8
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 3.3e-35 153.7 189 52.4
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 5.7e-35 152.9 93 76.3
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 2.8e-34 150.6 122 60.7
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 2.2e-31 141.0 381 30.4
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.8e-25 121.3 187 42.2
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 3.1e-25 120.6 134 51.5
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 6.5e-23 112.8 60 83.3
PGSC0003DMG401006600 Solanum tuberosum HOM05D032728 ORTHO05D007283 8.5e-23 112.5 55 94.5
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.5e-22 110.9 125 48.0
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 1.8e-20 104.8 218 33.0
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 2.0e-19 101.3 138 50.7
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 1.9e-14 84.7 73 63.0


User provided reference genes

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