Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g012740 Solanum pennellii HOM05D010553 ORTHO05D000034 9.7e-64 246.5 113 100.0
Sopen06g013690 Solanum pennellii HOM05D010553 ORTHO05D000034 4.4e-48 194.5 112 80.4
Sopen05g027980 Solanum pennellii HOM05D010553 ORTHO05D000034 9.1e-46 186.8 109 81.7
PGSC0003DMG400037635 Solanum tuberosum HOM05D010553 ORTHO05D000034 7.7e-37 157.1 84 86.9
PGSC0003DMG400042649 Solanum tuberosum HOM05D010553 ORTHO05D000034 7.7e-37 157.1 85 87.1
Sopen08g012020 Solanum pennellii HOM05D010553 ORTHO05D000034 4.2e-35 151.4 84 82.1
Sopen09g023530 Solanum pennellii HOM05D010553 ORTHO05D000034 1.8e-33 146.0 96 74.0
Sopen11g016350 Solanum pennellii HOM05D010553 ORTHO05D000034 2.3e-33 145.6 79 83.5
PGSC0003DMG400040359 Solanum tuberosum HOM05D010553 ORTHO05D000034 4.4e-32 141.4 84 78.6
PGSC0003DMG400009723 Solanum tuberosum HOM05D003808 ORTHO05D008840 2.7e-29 132.1 69 89.9
PGSC0003DMG400040935 Solanum tuberosum HOM05D010553 ORTHO05D000034 3.5e-29 131.7 72 86.1
Sopen12g011460 Solanum pennellii HOM05D010553 ORTHO05D000034 8.9e-25 117.1 77 72.7
Sopen12g027490 Solanum pennellii HOM05D000014 ORTHO05D000016 9.8e-24 113.6 75 73.3
PGSC0003DMG400042540 Solanum tuberosum HOM05D010553 ORTHO05D000034 6.6e-20 100.9 53 86.8
Sopen12g013830 Solanum pennellii HOM05D010553 ORTHO05D000034 1.6e-18 96.3 57 77.2
PGSC0003DMG400035681 Solanum tuberosum HOM05D010553 ORTHO05D000034 4.7e-18 94.7 52 84.6
PGSC0003DMG400035603 Solanum tuberosum HOM05D010553 ORTHO05D000034 1.1e-17 93.6 51 82.4
Sopen12g010150 Solanum pennellii HOM05D000004 ORTHO05D000034 5.4e-14 81.3 46 78.3
Oeu064005.1 Olea europaea HOM05D000004 ORTHO05D000034 7.0e-14 80.9 94 39.4
Oeu026329.1 Olea europaea HOM05D008284 ORTHO05D000034 2.3e-12 75.9 94 37.2
Manes.12G118805 Manihot esculenta HOM05D000004 ORTHO05D000034 3.0e-12 75.5 94 42.6
Manes.14G148397 Manihot esculenta HOM05D000004 ORTHO05D000034 3.0e-12 75.5 94 42.6
Manes.14G148419 Manihot esculenta HOM05D000004 ORTHO05D000034 3.0e-12 75.5 94 42.6
Manes.15G183710 Manihot esculenta HOM05D000004 ORTHO05D000034 6.6e-12 74.3 94 41.5
Manes.16G051801 Manihot esculenta HOM05D000004 ORTHO05D000034 6.6e-12 74.3 94 41.5
Manes.07G076922 Manihot esculenta HOM05D000004 ORTHO05D000034 8.6e-12 73.9 94 41.5
Manes.08G134411 Manihot esculenta HOM05D000004 ORTHO05D000034 8.6e-12 73.9 94 41.5
Oeu055711.1 Olea europaea HOM05D008284 ORTHO05D000224 8.6e-12 73.9 94 37.2
Oeu050755.1 Olea europaea HOM05D008284 ORTHO05D000034 1.1e-11 73.6 94 35.1
Sopen05g020230 Solanum pennellii HOM05D010553 ORTHO05D000034 1.1e-11 73.6 44 72.7
ClCG04G003440 Citrullus lanatus HOM05D000004 ORTHO05D000034 1.5e-11 73.2 92 37.0
Sopen12g020490 Solanum pennellii HOM05D010553 ORTHO05D000034 1.5e-11 73.2 42 83.3
Oeu022994.1 Olea europaea HOM05D008284 ORTHO05D000224 1.9e-11 72.8 81 39.5
Manes.18G144913 Manihot esculenta HOM05D000004 ORTHO05D000034 2.5e-11 72.4 94 40.4
Oeu045530.1 Olea europaea HOM05D008284 ORTHO05D000224 2.5e-11 72.4 95 34.7
CANSAT11G1617 Cannabis sativa HOM05D000004 ORTHO05D000034 3.3e-11 72.0 92 33.7
MELO3C029130.2 Cucumis melo HOM05D008649 ORTHO05D000224 3.3e-11 72.0 92 37.0
ClCG08G003900 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.3e-11 71.6 94 35.1
MELO3C028093.2 Cucumis melo HOM05D000004 ORTHO05D000034 4.3e-11 71.6 92 37.0
Sopen07g019250 Solanum pennellii HOM05D000004 ORTHO05D000034 4.3e-11 71.6 60 56.7
Oeu019592.1 Olea europaea HOM05D008284 ORTHO05D000224 5.6e-11 71.2 94 35.1
Manes.07G081133 Manihot esculenta HOM05D000004 ORTHO05D000034 7.3e-11 70.9 103 38.8
Manes.18G145815 Manihot esculenta HOM05D000004 ORTHO05D000034 7.3e-11 70.9 103 38.8
Manes.01G066666 Manihot esculenta HOM05D000004 ORTHO05D000034 1.2e-10 70.1 94 40.4
Oeu004128.1 Olea europaea HOM05D008284 ORTHO05D000224 1.2e-10 70.1 94 36.2
Manes.18G140597 Manihot esculenta HOM05D000004 ORTHO05D000034 1.6e-10 69.7 94 39.4
Manes.18G139308 Manihot esculenta HOM05D000004 ORTHO05D000034 2.1e-10 69.3 94 39.4
Manes.10G099101 Manihot esculenta HOM05D000004 ORTHO05D000034 3.6e-10 68.6 94 39.4
Oeu047013.1 Olea europaea HOM05D008284 ORTHO05D000034 3.6e-10 68.6 94 35.1
Oeu045669.1 Olea europaea HOM05D008284 ORTHO05D000224 4.7e-10 68.2 94 35.1
MELO3C030797.2 Cucumis melo HOM05D000004 ORTHO05D000002 6.2e-10 67.8 92 34.8
Manes.06G180001 Manihot esculenta HOM05D000004 ORTHO05D000034 8.1e-10 67.4 94 37.2
Manes.12G054904 Manihot esculenta HOM05D000004 ORTHO05D000034 8.1e-10 67.4 94 38.3
Oeu015644.1 Olea europaea HOM05D008284 ORTHO05D000224 8.1e-10 67.4 95 34.7
Oeu018629.1 Olea europaea HOM05D008284 ORTHO05D000224 8.1e-10 67.4 73 41.1
SHI38633 Sapria himalayana HOM05D000004 ORTHO05D000002 8.1e-10 67.4 97 32.0
Manes.16G075950 Manihot esculenta HOM05D000004 ORTHO05D000034 1.1e-09 67.0 86 41.9
Oeu043006.1 Olea europaea HOM05D008284 ORTHO05D000224 1.1e-09 67.0 95 33.7
Oeu055756.1 Olea europaea HOM05D008284 ORTHO05D000224 1.1e-09 67.0 94 34.0
SHI33345 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-09 66.6 97 32.0
SHI51976 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-09 66.2 97 30.9
Sopen03g011580 Solanum pennellii HOM05D000004 ORTHO05D000034 1.8e-09 66.2 34 88.2
Hma1.2p1_0142F.1_g064210 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.3e-09 65.9 66 42.4
Oeu047484.1 Olea europaea HOM05D008284 ORTHO05D000034 2.3e-09 65.9 76 40.8
Oeu018768.1 Olea europaea HOM05D008284 ORTHO05D000224 3.1e-09 65.5 65 44.6
MELO3C029128.2 Cucumis melo HOM05D000004 ORTHO05D000224 4.0e-09 65.1 92 33.7
Hma1.2p1_0866F.1_g230150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.0e-09 65.1 66 42.4
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.0e-09 65.1 62 43.5
Oeu018971.1 Olea europaea HOM05D008284 ORTHO05D000224 4.0e-09 65.1 94 35.1
RcHm_v2.0_Chr7g0237801 Rosa chinensis HOM05D000004 ORTHO05D000034 5.2e-09 64.7 80 35.0
RcHm_v2.0_Chr7g0237821 Rosa chinensis HOM05D000004 ORTHO05D000034 5.2e-09 64.7 80 35.0
Oeu010723.1 Olea europaea HOM05D008284 ORTHO05D000224 6.8e-09 64.3 94 33.0
Oeu048099.1 Olea europaea HOM05D008284 ORTHO05D000034 6.8e-09 64.3 72 38.9
Rhsim10G0033400 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.8e-09 64.3 95 38.9
MELO3C033340.2 Cucumis melo HOM05D000539 ORTHO05D000233 8.9e-09 63.9 77 36.4
Oeu009202.1 Olea europaea HOM05D008284 ORTHO05D000224 8.9e-09 63.9 94 33.0
Sopen11g016470 Solanum pennellii HOM05D010553 ORTHO05D000034 1.2e-08 63.5 39 69.2
ClCG01G012390 Citrullus lanatus HOM05D000004 ORTHO05D000034 2.0e-08 62.8 94 36.2
Oeu002304.1 Olea europaea HOM05D000004 ORTHO05D000224 2.0e-08 62.8 94 33.0
Rhsim01G0132500 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.0e-08 62.8 95 37.9
SHI40336 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-08 62.8 90 38.9
SHI47577 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-08 62.8 90 38.9
SHI53605 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-08 62.8 90 38.9
MELO3C032614.2 Cucumis melo HOM05D007786 ORTHO05D000224 2.6e-08 62.4 60 41.7
Hma1.2p1_0032F.1_g019000 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.6e-08 62.4 62 41.9
SHI50774 Sapria himalayana HOM05D000004 ORTHO05D000002 3.4e-08 62.0 90 37.8
SHI51461 Sapria himalayana HOM05D000004 ORTHO05D000002 3.4e-08 62.0 90 37.8
MELO3C033733.2 Cucumis melo HOM05D000004 ORTHO05D000224 4.4e-08 61.6 81 37.0
MELO3C033978.2 Cucumis melo HOM05D008649 ORTHO05D000034 4.4e-08 61.6 92 33.7
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.4e-08 61.6 62 40.3
SHI51991 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-08 61.6 90 37.8
MELO3C029662.2 Cucumis melo HOM05D007786 ORTHO05D009980 5.8e-08 61.2 61 41.0
MELO3C032168.2 Cucumis melo HOM05D007786 ORTHO05D000224 5.8e-08 61.2 92 31.5
RcHm_v2.0_Chr6g0256481 Rosa chinensis HOM05D000004 ORTHO05D000034 5.8e-08 61.2 79 32.9
SHI50214 Sapria himalayana HOM05D000004 ORTHO05D000002 7.5e-08 60.8 87 37.9
RcHm_v2.0_Chr4g0403481 Rosa chinensis HOM05D000004 ORTHO05D000224 1.3e-07 60.1 87 31.0
SHI30015 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-07 60.1 87 36.8
Oeu060665.1 Olea europaea HOM05D008284 ORTHO05D000224 1.7e-07 59.7 62 41.9
RcHm_v2.0_Chr0c08g0498091 Rosa chinensis HOM05D000004 ORTHO05D000034 2.2e-07 59.3 79 35.4
RcHm_v2.0_Chr6g0286381 Rosa chinensis HOM05D021382 ORTHO05D000034 2.2e-07 59.3 79 35.4
RcHm_v2.0_Chr7g0197101 Rosa chinensis HOM05D016471 ORTHO05D000034 2.2e-07 59.3 79 35.4
SHI37742 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 59.3 87 35.6
SHI42747 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 59.3 87 35.6
SHI46232 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 59.3 87 35.6
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.9e-07 58.9 62 38.7
Oeu023218.1 Olea europaea HOM05D008284 ORTHO05D000034 2.9e-07 58.9 75 37.3
SHI39571 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-07 58.9 110 28.2
Sopen04g014330 Solanum pennellii HOM05D000014 ORTHO05D000016 2.9e-07 58.9 35 74.3
Hma1.2p1_1167F.1_g263020 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.7e-07 58.5 62 40.3
Oeu013930.1 Olea europaea HOM05D008284 ORTHO05D000034 3.7e-07 58.5 62 41.9
Hma1.2p1_1484F.1_g286305 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.9e-07 58.2 81 33.3
Hma1.2p1_1716F.1_g299145 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.9e-07 58.2 81 33.3
Hma1.2p1_1869F.1_g306055 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.9e-07 58.2 81 33.3
Sabra15G0062900 Salix brachista HOM05D011124 ORTHO05D000224 4.9e-07 58.2 82 37.8
RcHm_v2.0_Chr2g0090701 Rosa chinensis HOM05D000004 ORTHO05D000002 6.4e-07 57.8 79 35.4
RcHm_v2.0_Chr5g0049881 Rosa chinensis HOM05D000004 ORTHO05D000034 6.4e-07 57.8 79 35.4
Rhsim02G0020600 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.3e-07 57.4 88 34.1
Rhsim06G0134400 Rhododendron simsii HOM05D000004 ORTHO05D000034 8.3e-07 57.4 88 34.1
Rhsim11G0017800 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.3e-07 57.4 88 34.1
SHI42770 Sapria himalayana HOM05D000004 ORTHO05D000002 8.3e-07 57.4 87 34.5
SHI42953 Sapria himalayana HOM05D000004 ORTHO05D000002 8.3e-07 57.4 87 34.5
MBI18_g08811_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 1.1e-06 57.0 78 29.5
RcHm_v2.0_Chr6g0271231 Rosa chinensis HOM05D000004 ORTHO05D000034 1.1e-06 57.0 79 35.4
Rhsim03G0130600 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.4e-06 56.6 88 33.0
Sabra18G0122200 Salix brachista HOM05D011124 ORTHO05D000224 1.4e-06 56.6 82 36.6
Sopen11g016480 Solanum pennellii HOM05D010553 ORTHO05D000034 1.4e-06 56.6 27 88.9
CANSAT80G1570 Cannabis sativa HOM05D000004 ORTHO05D000034 1.9e-06 56.2 92 33.7
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.9e-06 56.2 82 32.9
Hma1.2p1_0096F.1_g047910 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.9e-06 56.2 81 32.1
Rhsim07G0206500 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.9e-06 56.2 88 33.0
Ca_26969_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 2.4e-06 55.8 98 31.6
FvH4_4g15585 Fragaria vesca HOM05D000004 ORTHO05D000002 2.4e-06 55.8 81 33.3
MBI19_g33418_MAGBIO Magnolia biondii HOM05D010253 ORTHO05D000224 2.4e-06 55.8 69 31.9
ECA232G1647 Erigeron canadensis HOM05D010708 ORTHO05D011331 3.2e-06 55.5 91 33.0
ECA234G4788 Erigeron canadensis HOM05D000004 ORTHO05D011331 3.2e-06 55.5 94 35.1
Rhsim04G0149400 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.2e-06 55.5 88 33.0
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 3.2e-06 55.5 97 30.9
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 3.2e-06 55.5 97 30.9
Sabra15G0065900 Salix brachista HOM05D011124 ORTHO05D000224 3.2e-06 55.5 82 36.6
SHI36384 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-06 55.5 64 37.5
vmacro22614 Vaccinium macrocarpon HOM05D000134 ORTHO05D007593 3.2e-06 55.5 67 32.8
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 4.1e-06 55.1 64 37.5
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 4.1e-06 55.1 64 37.5
ECA248G3212 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.1e-06 55.1 95 31.6
Rhsim13G0172900 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.1e-06 55.1 97 27.8
RcHm_v2.0_Chr2g0130801 Rosa chinensis HOM05D000004 ORTHO05D000034 4.1e-06 55.1 79 31.6
SHI41235 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-06 55.1 82 30.5
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.4e-06 54.7 84 35.7
ECA232G1506 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.4e-06 54.7 91 31.9
Hma1.2p1_0381F.1_g140020 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.4e-06 54.7 43 51.2
Oeu027511.1 Olea europaea HOM05D008284 ORTHO05D000034 5.4e-06 54.7 68 36.8
Oeu061980.1 Olea europaea HOM05D000004 ORTHO05D000224 5.4e-06 54.7 57 35.1
SHI43056 Sapria himalayana HOM05D000004 ORTHO05D000002 5.4e-06 54.7 62 35.5
SHI44008 Sapria himalayana HOM05D000004 ORTHO05D000002 5.4e-06 54.7 62 35.5
ECA236G3284 Erigeron canadensis HOM05D002331 ORTHO05D002624 7.1e-06 54.3 87 33.3
ECA238G0329 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-06 54.3 91 31.9
ECA246G1527 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-06 54.3 91 31.9
ECA314G0003 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-06 54.3 91 31.9
Medtr1g053380 Medicago truncatula HOM05D008853 ORTHO05D000224 7.1e-06 54.3 50 44.0
Oeu045843.1 Olea europaea HOM05D008284 ORTHO05D000224 7.1e-06 54.3 69 37.7
Oeu050910.1 Olea europaea HOM05D000004 ORTHO05D000224 7.1e-06 54.3 57 35.1
Rhsim02G0115700 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.1e-06 54.3 88 33.0
Rhsim11G0061300 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.1e-06 54.3 88 31.8
Ca_04722_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.2e-06 53.9 98 31.6


User provided reference genes

Program Settings