Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g012010 Solanum pennellii HOM05D000002 ORTHO05D009184 1.2e-66 256.5 142 100.0
Thhalv10023107m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 2.3e-17 92.8 114 48.2
Thhalv10002214m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 3.3e-16 89.0 114 46.5
PGSC0003DMG400045785 Solanum tuberosum HOM05D000002 ORTHO05D009184 2.8e-15 85.9 96 49.0
Oeu040982.1 Olea europaea HOM05D000002 ORTHO05D009184 3.6e-15 85.5 96 50.0
Nitab4.5_0010916g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 2.3e-14 82.8 89 48.3
Thhalv10003344m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 5.7e-13 78.2 114 43.9
Oeu057114.1 Olea europaea HOM05D000002 ORTHO05D009184 9.8e-13 77.4 114 43.0
Nitab4.5_0007418g0040 Nicotiana tabacum HOM05D000002 ORTHO05D009184 1.3e-12 77.0 84 47.6
Oeu008281.1 Olea europaea HOM05D000002 ORTHO05D009184 1.3e-12 77.0 97 46.4
Nitab4.5_0002476g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 2.8e-12 75.9 93 45.2
Sopen09g018840 Solanum pennellii HOM05D001078 ORTHO05D000034 1.1e-11 73.9 84 46.4
HanXRQChr16g0510691 Helianthus annuus HOM05D000002 ORTHO05D009184 1.8e-11 73.2 93 46.2
COL.COLO4_15229 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.4e-11 72.8 94 43.6
Nitab4.5_0002656g0070 Nicotiana tabacum HOM05D000002 ORTHO05D009184 9.2e-11 70.9 86 46.5
QL02p054488 Quercus lobata HOM05D000002 ORTHO05D000001 9.2e-11 70.9 83 49.4
COL.COLO4_22322 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.0e-10 69.7 84 42.9
PSO384G3605 Papaver somniferum HOM05D000002 ORTHO05D009184 5.9e-10 68.2 94 42.6
COL.COLO4_12798 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.0e-09 67.4 115 38.3
COL.COLO4_04258 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.3e-09 67.0 74 45.9
PGSC0003DMG400004248 Solanum tuberosum HOM05D000002 ORTHO05D009184 1.3e-09 67.0 72 45.8
Nitab4.5_0000352g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 2.9e-09 65.9 74 48.6
Oeu035362.1 Olea europaea HOM05D000002 ORTHO05D009184 3.8e-09 65.5 96 41.7
COL.COLO4_32152 Corchorus olitorius HOM05D000002 ORTHO05D009184 8.6e-09 64.3 95 40.0
Nitab4.5_0005334g0020 Nicotiana tabacum HOM05D000002 ORTHO05D009184 8.6e-09 64.3 57 49.1
COL.COLO4_37841 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.5e-08 63.5 95 40.0
COL.COLO4_27409 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.5e-08 62.8 57 50.9
COL.COLO4_26578 Corchorus olitorius HOM05D000002 ORTHO05D009184 3.3e-08 62.4 95 40.0
Nitab4.5_0009106g0030 Nicotiana tabacum HOM05D000002 ORTHO05D009184 4.3e-08 62.0 72 44.4
PSO675G0504 Papaver somniferum HOM05D000002 ORTHO05D000001 9.5e-08 60.8 99 41.4
PSO832G0651 Papaver somniferum HOM05D000002 ORTHO05D009184 9.5e-08 60.8 63 52.4
Sopen01g028020 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.5 79 46.8
Rhsim07G0144200 Rhododendron simsii HOM05D000111 ORTHO05D000134 1.6e-07 60.1 67 43.3
COL.COLO4_34309 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.1e-07 59.7 95 38.9
PSO541G2535 Papaver somniferum HOM05D000002 ORTHO05D009184 2.1e-07 59.7 83 44.6
Rhsim10G0112700 Rhododendron simsii HOM05D000002 ORTHO05D009184 2.1e-07 59.7 69 40.6
Sopen03g010200 Solanum pennellii HOM05D000002 ORTHO05D009184 2.8e-07 59.3 93 38.7
RhsimUnG0229800 Rhododendron simsii HOM05D000002 ORTHO05D009184 3.6e-07 58.9 89 36.0
Rhsim11G0013900 Rhododendron simsii HOM05D000002 ORTHO05D009184 4.7e-07 58.5 76 42.1
Rhsim02G0157300 Rhododendron simsii HOM05D000002 ORTHO05D009184 6.1e-07 58.2 64 45.3
Rhsim08G0142800 Rhododendron simsii HOM05D000002 ORTHO05D009184 6.1e-07 58.2 67 41.8
RhsimUnG0242900 Rhododendron simsii HOM05D005456 ORTHO05D006805 6.1e-07 58.2 87 37.9
QL10p046058 Quercus lobata HOM05D000002 ORTHO05D000001 8.0e-07 57.8 64 51.6
QL05p080279 Quercus lobata HOM05D000002 ORTHO05D009184 1.0e-06 57.4 89 41.6
COL.COLO4_05739 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.4e-06 57.0 95 37.9
Rhsim02G0155100 Rhododendron simsii HOM05D000002 ORTHO05D009184 1.4e-06 57.0 91 36.3
Rhsim02G0158100 Rhododendron simsii HOM05D000002 ORTHO05D009184 1.4e-06 57.0 74 45.9
Rhsim09G0157400 Rhododendron simsii HOM05D000002 ORTHO05D009184 3.0e-06 55.8 76 43.4
QL05p052824 Quercus lobata HOM05D000002 ORTHO05D000001 5.2e-06 55.1 89 40.4
RhsimUnG0017000 Rhododendron simsii HOM05D000002 ORTHO05D009184 5.2e-06 55.1 85 42.4
RhsimUnG0133800 Rhododendron simsii HOM05D000002 ORTHO05D009184 5.2e-06 55.1 85 42.4
TAR654G0001 Trochodendron aralioides HOM05D000002 ORTHO05D009184 5.2e-06 55.1 94 38.3


User provided reference genes

Program Settings