Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g008840 Solanum pennellii HOM05D012110 ORTHO05D014566 3.1e-144 515.4 314 100.0
PGSC0003DMG400021020 Solanum tuberosum HOM05D012110 ORTHO05D014566 4.1e-35 152.9 93 86.0
PGSC0003DMG400025087 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.3e-29 133.3 377 31.6
PGSC0003DMG400017378 Solanum tuberosum HOM05D012110 ORTHO05D014566 1.6e-28 131.0 84 79.8
PGSC0003DMG400010858 Solanum tuberosum HOM05D012110 ORTHO05D014566 1.1e-27 128.3 133 52.6
PGSC0003DMG400013742 Solanum tuberosum HOM05D012110 ORTHO05D014566 3.0e-22 110.2 73 74.0
PGSC0003DMG400002243 Solanum tuberosum HOM05D012110 ORTHO05D014566 1.8e-19 100.9 73 68.5
PGSC0003DMG400026147 Solanum tuberosum HOM05D012110 ORTHO05D014566 1.7e-17 94.4 64 73.4
CAN.G57.23 Capsicum annuum HOM05D000423 ORTHO05D014566 4.2e-16 89.7 86 55.8
PGSC0003DMG400001303 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.6e-15 86.7 130 41.5
CAN.G89.5 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-11 73.9 229 32.3
CAN.G733.5 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-11 73.6 191 31.4
Sopen09g023240 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-11 73.6 45 75.6
CAN.G625.33 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-11 73.2 214 32.2
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 7.0e-11 72.4 45 73.3
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 9.1e-11 72.0 43 76.7
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-10 70.5 42 76.2
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 76.2
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 76.2
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-10 70.5 42 76.2
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-10 70.5 42 76.2
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-10 70.5 42 76.2
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 2.6e-10 70.5 42 76.2
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 76.2
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 76.2
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 76.2
Sopen08g018990 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 73.8
Sopen08g020970 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 76.2
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 76.2
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-10 70.5 42 76.2
Sopen08g016370 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-10 70.1 41 78.0
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-10 69.7 42 76.2
Sopen11g017750 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-10 69.7 46 69.6
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-10 68.9 42 73.8
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-09 68.6 42 76.2
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-09 68.6 42 76.2
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-09 68.2 44 70.5
Sopen11g011000 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-09 68.2 41 75.6
CAN.G222.34 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-09 67.8 211 32.2
CAN.G98.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-09 67.8 259 29.0
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-09 67.8 42 73.8
Sopen03g007050 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-09 67.4 42 73.8
Sopen05g010090 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-09 67.4 42 73.8
Sopen03g026780 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-09 67.0 41 75.6
Sopen05g025460 Solanum pennellii HOM05D000541 ORTHO05D014566 2.9e-09 67.0 38 76.3
Sopen09g025410 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-09 67.0 42 71.4
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-09 67.0 41 73.2
Sopen01g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 3.8e-09 66.6 44 70.5
Sopen01g029240 Solanum pennellii HOM05D000047 ORTHO05D000044 3.8e-09 66.6 41 73.2
Sopen04g018110 Solanum pennellii HOM05D000047 ORTHO05D001383 5.0e-09 66.2 41 73.2
Sopen09g011990 Solanum pennellii HOM05D000047 ORTHO05D000044 5.0e-09 66.2 42 71.4
CAN.G320.5 Capsicum annuum HOM05D000541 ORTHO05D000137 6.5e-09 65.9 180 30.6
QL08p015689 Quercus lobata HOM05D000047 ORTHO05D000044 6.5e-09 65.9 42 69.0
Sopen02g008370 Solanum pennellii HOM05D000047 ORTHO05D000044 6.5e-09 65.9 42 71.4
Sopen04g021430 Solanum pennellii HOM05D000047 ORTHO05D000044 6.5e-09 65.9 41 73.2
Sopen11g023900 Solanum pennellii HOM05D000047 ORTHO05D001383 6.5e-09 65.9 41 73.2
CAN.G370.96 Capsicum annuum HOM05D000541 ORTHO05D000137 8.5e-09 65.5 185 33.5
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL02p080030 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL02p080185 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-09 65.5 42 69.0
CAN.G587.10 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-08 65.1 190 31.6
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 1.1e-08 65.1 42 66.7
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 1.1e-08 65.1 42 69.0
Sopen02g002100 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-08 65.1 45 66.7
Sopen06g014950 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-08 65.1 42 69.0
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 64.7 41 73.2
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.5e-08 64.7 42 69.0
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.5e-08 64.7 42 69.0
TWI81G0361 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.5e-08 64.7 42 69.0
CAN.G220.3 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-08 64.3 169 30.2
Sopen07g013100 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-08 64.3 42 71.4
Sopen12g011840 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-08 64.3 42 71.4
CAN.G677.2 Capsicum annuum HOM05D000351 ORTHO05D000137 2.5e-08 63.9 188 29.3
Sopen02g008270 Solanum pennellii HOM05D000047 ORTHO05D000044 3.2e-08 63.5 42 69.0
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 4.2e-08 63.2 42 66.7
CAN.G1104.11 Capsicum annuum HOM05D000541 ORTHO05D000137 5.5e-08 62.8 185 31.9
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 5.5e-08 62.8 41 70.7
CAN.G1157.5 Capsicum annuum HOM05D000541 ORTHO05D000137 7.2e-08 62.4 77 46.8
CAN.G687.4 Capsicum annuum HOM05D000541 ORTHO05D000137 7.2e-08 62.4 82 47.6
Sopen09g008970 Solanum pennellii HOM05D000047 ORTHO05D000044 7.2e-08 62.4 42 66.7
TWI79G0744 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 7.2e-08 62.4 40 70.0
CAN.G1139.3 Capsicum annuum HOM05D000541 ORTHO05D000137 9.4e-08 62.0 198 30.3
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 9.4e-08 62.0 44 65.9
TWI53G1469 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.4e-08 62.0 42 66.7
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 1.2e-07 61.6 41 70.7
Sopen11g019180 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-07 61.6 41 68.3
Sopen02g001620 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-07 61.2 46 63.0
CAN.G248.10 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-07 60.8 76 43.4
CAN.G321.7 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-07 60.8 283 25.1
Sopen01g028390 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-07 60.8 41 68.3
CAN.G1236.4 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-07 60.5 250 26.0
CAN.G376.13 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-07 60.5 69 47.8
CAN.G1.55 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-07 60.1 70 48.6
CAN.G418.2 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-07 60.1 182 31.3
CAN.G773.9 Capsicum annuum HOM05D000541 ORTHO05D000137 4.7e-07 59.7 218 28.9
CAN.G913.4 Capsicum annuum HOM05D000541 ORTHO05D000818 4.7e-07 59.7 100 41.0
Sopen02g008830 Solanum pennellii HOM05D000047 ORTHO05D000044 4.7e-07 59.7 57 56.1
Sopen12g014790 Solanum pennellii HOM05D000047 ORTHO05D000044 4.7e-07 59.7 41 68.3
PGSC0003DMG400026507 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.7e-07 59.7 106 36.8
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 6.1e-07 59.3 37 73.0
CAN.G1334.12 Capsicum annuum HOM05D000541 ORTHO05D000137 8.0e-07 58.9 79 44.3
CAN.G261.7 Capsicum annuum HOM05D000541 ORTHO05D000137 8.0e-07 58.9 79 45.6
CAN.G6.16 Capsicum annuum HOM05D000541 ORTHO05D000137 8.0e-07 58.9 202 30.2
CAN.G62.58 Capsicum annuum HOM05D000541 ORTHO05D000137 8.0e-07 58.9 74 47.3
CAN.G398.17 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-06 58.5 79 46.8
CAN.G165.26 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-06 58.2 72 45.8
CAN.G356.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-06 58.2 202 32.2
CAN.G590.5 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-06 58.2 169 29.6
CAN.G61.19 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-06 58.2 74 47.3
CAN.G176.17 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-06 57.8 77 42.9
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 1.8e-06 57.8 109 41.3
CAN.G673.18 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-06 57.8 195 31.3
CAN.G598.15 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-06 57.4 71 46.5
CAN.G89.6 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-06 57.4 177 30.5
Sopen09g023170 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-06 57.4 42 61.9
CAN.G1819.2 Capsicum annuum HOM05D000541 ORTHO05D000137 3.0e-06 57.0 70 47.1
CAN.G359.10 Capsicum annuum HOM05D000541 ORTHO05D000137 3.0e-06 57.0 74 47.3
CAN.G956.12 Capsicum annuum HOM05D000541 ORTHO05D000137 3.0e-06 57.0 94 40.4
CAN.G1391.5 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-06 56.6 68 44.1
CAN.G271.2 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-06 56.6 79 46.8
CAN.G536.8 Capsicum annuum HOM05D003627 ORTHO05D001832 4.0e-06 56.6 123 37.4
Sopen07g010140 Solanum pennellii HOM05D001570 ORTHO05D001566 4.0e-06 56.6 59 54.2
CAN.G411.44 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-06 56.2 77 42.9
CAN.G610.2 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-06 56.2 72 45.8
Sopen03g017170 Solanum pennellii HOM05D000047 ORTHO05D001383 5.2e-06 56.2 57 54.4
Sopen11g022540 Solanum pennellii HOM05D000047 ORTHO05D001383 5.2e-06 56.2 45 62.2
PGSC0003DMG400006647 Solanum tuberosum HOM05D000541 ORTHO05D000137 5.2e-06 56.2 45 62.2
CAN.G518.10 Capsicum annuum HOM05D000541 ORTHO05D000137 6.7e-06 55.8 117 40.2
Sopen01g018390 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-06 55.8 41 65.9
Sopen01g026240 Solanum pennellii HOM05D012110 ORTHO05D014566 6.7e-06 55.8 35 68.6
Sopen08g010270 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-06 55.8 56 57.1
PGSC0003DMG400019192 Solanum tuberosum HOM05D012110 ORTHO05D014566 6.7e-06 55.8 33 75.8
CAN.G135.44 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-06 55.5 65 46.2
CAN.G1358.1 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-06 55.5 68 45.6
CAN.G262.17 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-06 55.5 62 48.4
CAN.G283.8 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-06 55.5 204 28.9
CAN.G5.20 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-06 55.5 78 46.2
CAN.G81.1 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-06 55.5 82 42.7


User provided reference genes

Program Settings