Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g007740 Solanum pennellii HOM05D000158 ORTHO05D000197 3.0e-279 964.5 480 100.0
PGSC0003DMG400014583 Solanum tuberosum HOM05D000158 ORTHO05D000197 2.7e-99 366.7 713 37.9
Sopen01g020000 Solanum pennellii HOM05D000158 ORTHO05D000197 5.0e-77 292.7 166 87.3
Sopen12g001100 Solanum pennellii HOM05D000158 ORTHO05D000197 2.6e-73 280.4 907 29.0
Solyc00g500003.1 Solanum lycopersicum HOM05D000158 ORTHO05D000197 3.8e-69 266.5 342 48.2
PGSC0003DMG400035129 Solanum tuberosum HOM05D000158 ORTHO05D000197 4.7e-59 233.0 149 77.9
Sopen06g007050 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-55 220.7 166 71.7
Sopen04g017720 Solanum pennellii HOM05D000158 ORTHO05D000197 1.4e-50 204.9 324 45.4
Sopen02g004470 Solanum pennellii HOM05D000158 ORTHO05D002858 3.1e-50 203.8 566 30.6
Sopen09g015150 Solanum pennellii HOM05D000158 ORTHO05D000197 1.2e-43 181.8 462 31.0
Sopen10g026710 Solanum pennellii HOM05D000158 ORTHO05D000197 7.1e-39 166.0 361 34.6
PGSC0003DMG400019381 Solanum tuberosum HOM05D000158 ORTHO05D000197 1.0e-37 162.2 126 66.7
Sopen11g012860 Solanum pennellii HOM05D000004 ORTHO05D003614 3.6e-35 153.7 588 26.4
Sopen04g015620 Solanum pennellii HOM05D000158 ORTHO05D002858 3.0e-29 134.0 334 32.0
Sopen11g016230 Solanum pennellii HOM05D000158 ORTHO05D000197 2.5e-28 131.0 353 32.6
Sopen02g001720 Solanum pennellii HOM05D000158 ORTHO05D000197 5.6e-28 129.8 159 45.3
Sopen03g016650 Solanum pennellii HOM05D000158 ORTHO05D000197 2.1e-27 127.9 474 26.8
Sopen09g014910 Solanum pennellii HOM05D000158 ORTHO05D000197 1.8e-26 124.8 423 26.7
Sopen07g018160 Solanum pennellii HOM05D000158 ORTHO05D000197 5.8e-25 119.8 366 30.3
Sopen01g014030 Solanum pennellii HOM05D000158 ORTHO05D000197 1.1e-23 115.5 175 41.1
Sopen01g014040 Solanum pennellii HOM05D000158 ORTHO05D000197 3.2e-23 114.0 221 37.6
Sopen01g022440 Solanum pennellii HOM05D000158 ORTHO05D002858 1.2e-22 112.1 338 29.3
Sopen12g012220 Solanum pennellii HOM05D000158 ORTHO05D000197 1.2e-22 112.1 219 37.9
Sopen10g026700 Solanum pennellii HOM05D000158 ORTHO05D000197 1.6e-22 111.7 461 26.2
Sopen12g009660 Solanum pennellii HOM05D000158 ORTHO05D000197 2.3e-21 107.8 147 44.2
PGSC0003DMG400046308 Solanum tuberosum HOM05D000158 ORTHO05D003614 5.1e-21 106.7 88 63.6
Sopen01g016730 Solanum pennellii HOM05D000158 ORTHO05D000197 4.3e-20 103.6 155 40.0
Sopen09g015640 Solanum pennellii HOM05D000158 ORTHO05D000197 7.4e-20 102.8 153 41.2
Sopen01g030040 Solanum pennellii HOM05D000158 ORTHO05D000197 2.1e-19 101.3 172 37.8
Sopen03g016660 Solanum pennellii HOM05D000158 ORTHO05D000197 2.8e-19 100.9 495 25.3
Sopen10g019130 Solanum pennellii HOM05D000158 ORTHO05D003614 3.6e-19 100.5 511 24.9
Sopen03g018570 Solanum pennellii HOM05D000158 ORTHO05D000197 9.0e-18 95.9 296 30.4
Solyc00g500236.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.0e-17 94.7 104 47.1
Sopen06g008750 Solanum pennellii HOM05D000004 ORTHO05D000002 7.6e-17 92.8 475 23.8
Sopen09g015630 Solanum pennellii HOM05D000158 ORTHO05D002858 9.9e-17 92.4 307 29.0
Solyc10g045777.1 Solanum lycopersicum HOM05D000158 ORTHO05D000197 1.3e-16 92.0 121 41.3
Sopen10g010850 Solanum pennellii HOM05D000158 ORTHO05D000197 6.4e-16 89.7 63 73.0
Sopen01g022450 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-15 88.6 97 46.4
Sopen07g010610 Solanum pennellii HOM05D000158 ORTHO05D000197 5.5e-15 86.7 346 26.0
Sopen03g018610 Solanum pennellii HOM05D000158 ORTHO05D003614 2.7e-14 84.3 262 30.2
Sopen11g017290 Solanum pennellii HOM05D000158 ORTHO05D000002 5.1e-13 80.1 111 43.2
Sopen02g002770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-12 78.6 128 37.5
Sopen01g014380 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-12 78.2 117 41.0
Sopen04g008050 Solanum pennellii HOM05D000004 ORTHO05D003614 1.9e-12 78.2 128 38.3
Sopen08g013180 Solanum pennellii HOM05D000158 ORTHO05D003614 3.3e-12 77.4 111 43.2
Sopen12g012480 Solanum pennellii HOM05D000158 ORTHO05D000197 7.4e-12 76.3 111 41.4
Sopen09g015650 Solanum pennellii HOM05D000158 ORTHO05D000197 9.6e-12 75.9 127 37.8
Solyc00g500090.1 Solanum lycopersicum HOM05D000158 ORTHO05D000197 4.8e-11 73.6 75 46.7
Sopen10g019120 Solanum pennellii HOM05D000158 ORTHO05D003614 8.1e-11 72.8 214 29.4
Sopen09g015160 Solanum pennellii HOM05D000158 ORTHO05D000197 4.0e-10 70.5 111 40.5
Sopen11g016660 Solanum pennellii HOM05D000158 ORTHO05D000197 2.6e-09 67.8 115 38.3
arahy.Tifrunner.gnm1.ann1.T3KCYU Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-09 67.0 340 25.9
MELO3C014312.2 Cucumis melo HOM05D000158 ORTHO05D000197 7.6e-09 66.2 167 35.3
MELO3C025048.2 Cucumis melo HOM05D000158 ORTHO05D000197 7.6e-09 66.2 199 32.2
Sopen03g014160 Solanum pennellii HOM05D000004 ORTHO05D000197 1.3e-08 65.5 110 34.5
Sopen12g027710 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 65.5 61 50.8
Sopen05g019960 Solanum pennellii HOM05D000158 ORTHO05D000197 6.5e-08 63.2 46 56.5
Sopen05g024500 Solanum pennellii HOM05D000158 ORTHO05D000197 8.4e-08 62.8 47 53.2
Sopen07g009120 Solanum pennellii HOM05D000158 ORTHO05D002858 8.4e-08 62.8 199 27.6
Sopen09g013300 Solanum pennellii HOM05D000158 ORTHO05D003614 8.4e-08 62.8 81 42.0
Sopen10g016530 Solanum pennellii HOM05D000158 ORTHO05D000197 8.4e-08 62.8 119 31.1
Sopen11g007840 Solanum pennellii HOM05D000158 ORTHO05D000197 8.4e-08 62.8 44 59.1
Sopen06g008970 Solanum pennellii HOM05D000158 ORTHO05D000197 1.9e-07 61.6 47 55.3
MELO3C015657.2 Cucumis melo HOM05D000158 ORTHO05D000197 2.5e-07 61.2 167 32.9
MELO3C006991.2 Cucumis melo HOM05D000158 ORTHO05D000197 3.2e-07 60.8 167 34.1
MELO3C026406.2 Cucumis melo HOM05D000158 ORTHO05D000197 3.2e-07 60.8 163 34.4
Sopen09g015100 Solanum pennellii HOM05D000158 ORTHO05D000197 3.2e-07 60.8 158 31.0
Sopen09g015120 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 60.5 39 64.1
Sopen09g015140 Solanum pennellii HOM05D000158 ORTHO05D000197 4.2e-07 60.5 109 33.9
arahy.Tifrunner.gnm1.ann1.N9660C Arachis hypogaea HOM05D000158 ORTHO05D000197 5.5e-07 60.1 325 24.6
arahy.Tifrunner.gnm1.ann1.5H9E82 Arachis hypogaea HOM05D000158 ORTHO05D002858 7.1e-07 59.7 274 24.8
ClCG03G013730 Citrullus lanatus HOM05D000158 ORTHO05D000002 7.1e-07 59.7 167 32.9
Sopen08g015230 Solanum pennellii HOM05D000158 ORTHO05D000197 1.2e-06 58.9 51 51.0
MELO3C004850.2 Cucumis melo HOM05D000158 ORTHO05D000197 1.6e-06 58.5 167 33.5
MELO3C030586.2 Cucumis melo HOM05D000158 ORTHO05D015074 2.1e-06 58.2 167 32.9
Sopen01g009070 Solanum pennellii HOM05D000158 ORTHO05D000197 2.7e-06 57.8 74 40.5
Sopen05g023980 Solanum pennellii HOM05D000158 ORTHO05D000197 2.7e-06 57.8 39 59.0
Sopen01g025440 Solanum pennellii HOM05D000158 ORTHO05D000197 3.5e-06 57.4 113 31.0
Sopen09g008380 Solanum pennellii HOM05D014612 ORTHO05D003614 3.5e-06 57.4 51 62.7
arahy.Tifrunner.gnm1.ann1.WBA586 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.6e-06 57.0 335 24.8
Glyma.15G210800 Glycine max HOM05D000158 ORTHO05D000197 4.6e-06 57.0 380 23.7
PGSC0003DMG400036342 Solanum tuberosum HOM05D000158 ORTHO05D000197 4.6e-06 57.0 34 73.5
Gorai.006G078200 Gossypium raimondii HOM05D000158 ORTHO05D000197 6.0e-06 56.6 165 29.7
Sopen02g001730 Solanum pennellii HOM05D000158 ORTHO05D000197 6.0e-06 56.6 61 42.6
Sopen07g010890 Solanum pennellii HOM05D000158 ORTHO05D000184 6.0e-06 56.6 54 55.6
PGSC0003DMG400006484 Solanum tuberosum HOM05D014612 ORTHO05D003614 6.0e-06 56.6 49 59.2
Manes.09G089621 Manihot esculenta HOM05D000158 ORTHO05D000002 7.9e-06 56.2 32 71.9
QL07p020245 Quercus lobata HOM05D000158 ORTHO05D000002 7.9e-06 56.2 36 75.0
Sopen02g001740 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-06 56.2 47 46.8
Sopen09g013310 Solanum pennellii HOM05D000158 ORTHO05D003614 7.9e-06 56.2 75 41.3


User provided reference genes

Program Settings